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The map label for this gene is 86747169

Identifier: 86747169

GI number: 86747169

Start: 42525

End: 42956

Strand: Reverse

Name: 86747169

Synonym: RPB_0042

Alternate gene names: NA

Gene position: 42956-42525 (Counterclockwise)

Preceding gene: 86747175

Following gene: 86747167

Centisome position: 0.81

GC content: 73.61

Gene sequence:

>432_bases
ATGACGTCCTCAGCCTGCTCTCATTCCGGACCGCCCAACCGCGGCATTGCTCGGACCGGCCTGTTGGCCGCCGCAGCCGT
CCTGGCTCTGGCACTCGTGGCCGTGTCCGGCGACGCCGAGGCGGCGAAGCGGCGCGCTTCCGTCGGGCATTTCGACGGCA
CCTGGAACGTGGTGTTCGCCACCCGGGCCGGCAATTGCAGCCCGACCTACAGCGCGCCGTTCGCCGTGCAGGGCCGCCGC
GTCGCCTCGGCCGGCGGCGGCAAGGTCACGGGCGGCATCACCGGGGGCGGCAATGTCGCGGTCCGGCTGTCGGTCGGCGC
TTCGGTCGCCAATGGCCGCGGCCGTCTGTCGGGCAATTCGGGCACCGGGATCTGGAGCGGCCTGATCCAGGGCGACCGCT
GCCGCGGCGTCTGGCAGGCGACGCGGGGCTGA

Upstream 100 bases:

>100_bases
GCGTCGACACCTCTTATCGGCAGGCGCAGGATCGCAGCATCCGCGCCGCGGCCGGCAAGGTCGGTACCGGCCGGTCGTAG
GTTCAGCTTCGGAGATGATC

Downstream 100 bases:

>100_bases
GGCCCGAACGCGGTCGCCGCGAGCATCAACCCTCCCCCTCCAGGGGAGGGTAAAGAGAGCGCCGCCGCAATCCTCGACAT
CAGGGTGAGGGTGGGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTSSACSHSGPPNRGIARTGLLAAAAVLALALVAVSGDAEAAKRRASVGHFDGTWNVVFATRAGNCSPTYSAPFAVQGRR
VASAGGGKVTGGITGGGNVAVRLSVGASVANGRGRLSGNSGTGIWSGLIQGDRCRGVWQATRG

Sequences:

>Translated_143_residues
MTSSACSHSGPPNRGIARTGLLAAAAVLALALVAVSGDAEAAKRRASVGHFDGTWNVVFATRAGNCSPTYSAPFAVQGRR
VASAGGGKVTGGITGGGNVAVRLSVGASVANGRGRLSGNSGTGIWSGLIQGDRCRGVWQATRG
>Mature_142_residues
TSSACSHSGPPNRGIARTGLLAAAAVLALALVAVSGDAEAAKRRASVGHFDGTWNVVFATRAGNCSPTYSAPFAVQGRRV
ASAGGGKVTGGITGGGNVAVRLSVGASVANGRGRLSGNSGTGIWSGLIQGDRCRGVWQATRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14108; Mature: 13977

Theoretical pI: Translated: 12.16; Mature: 12.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSACSHSGPPNRGIARTGLLAAAAVLALALVAVSGDAEAAKRRASVGHFDGTWNVVFA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEE
TRAGNCSPTYSAPFAVQGRRVASAGGGKVTGGITGGGNVAVRLSVGASVANGRGRLSGNS
ECCCCCCCCCCCCEEECCCEEECCCCCEEEEEEECCCCEEEEEEECCEECCCCCEECCCC
GTGIWSGLIQGDRCRGVWQATRG
CCCEEECCCCCCCCCCEECCCCC
>Mature Secondary Structure 
TSSACSHSGPPNRGIARTGLLAAAAVLALALVAVSGDAEAAKRRASVGHFDGTWNVVFA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEEE
TRAGNCSPTYSAPFAVQGRRVASAGGGKVTGGITGGGNVAVRLSVGASVANGRGRLSGNS
ECCCCCCCCCCCCEEECCCEEECCCCCEEEEEEECCCCEEEEEEECCEECCCCCEECCCC
GTGIWSGLIQGDRCRGVWQATRG
CCCEEECCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA