Definition | Frankia sp. CcI3 chromosome, complete genome. |
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Accession | NC_007777 |
Length | 5,433,628 |
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Identifier: 86742488
GI number:
Start: 4566464
End: 4568413
Strand: Direct
Name: Not Available
Synonym: Francci3_3809
Alternate gene names: NA
Gene position: NA
Preceding gene: 86742486
Following gene: 86742491
Centisome position: NA
GC content: NA
Gene sequence:
>1950_bases ATGTCACCTCGGCCGCCGTGTAGCAGGCGTCGCCTCGTCACCTGTGCACCCAGAGTTGCCATCGAGGGCACCGGGGCACA TGGATTTTCGGGTCGCGGGCGCCGCGCGGCTCACCGCGAGCGGGTTCAGCGTAGACACCGCTCAGAGAAGACCAGGAGCG TCCCGCTGTCCGTCACAGCTGAAGTACCCACAGATGATCTGACTCCCTACGAGCCACAAACCACCCCCTCCACCCCCGGG TCCCCGGCGGCACCGACCTTCGCGGAGCTCGGCGTGCGCGCCGAGACCGTCTCGGCCCTGACCGAAGCGGGCATCGTGCA CGCTTTCCCCATCCAGGAGTTGACGCTTCCACTCGCCCTGGCCCGCAACGACATCATCGGGCAGGCCCGCACCGGCACCG GCAAGACCCTCGCGTTCGGCGTCCCGGTGGTGCAGACGGTGCTGGCGGCCAAGGAGGGTGCCGACGGCCGTCCGCAGGCC CTCGTCGTGGTGCCCACCCGTGAGCTGTGCGTCCAGGTGACCGCGGACGTCACCCGCGCCGGCGCCCGCCGTGGCCTGCG GGTGCTGTCCGTCTACGGCGGGCGTGCCTACGAGCCGCAGCTGTCCGCGCTGCGCGCCGGGGTCGACATCGTCGTCGGCA CGCCCGGCCGCCTGCTGGATCTCGCCCGCCAGCACGTGCTCGACCTGGCCGGCGTCGGCACCCTGGTGCTCGACGAGGCC GACGAGATGCTCGACCTCGGCTTCCTGCCGGACGTCGAGCGCATCATGTCGCAGCTGCCGACCGAGCGGCAGACGATGCT GTTCTCCGCGACCATGCCCGGCCCGGTCATCTCCCTGGCCCGGCGGTTCATGAAACGGCCCGTGCACGTCCGCGCGGAAC AGCCGGATGAGGGGCGCACGGTCCCGACCACCCGTCAGCACGTCTTCCGCGCCCACGCGCTGGACAAGATGGAGGTGCTG GCCCGGGTCCTGCAGGCCGGCGGCCGGGGGCTCGCCATGGTGTTCGTGCGGACCAGGCGCACCGCGGACAAGGTCGCCGA GGACCTCGCCAAGCGCGGCTTCGCGGCCGCGGCGGTGCACGGCGACCTGGGCCAGGGCCAGCGCGAGCAGGCGCTGCGCG CCTTCCGCTCCGGCAAGGTCGACGTCCTGGTCGCCACCGACGTGGCCGCCCGGGGCATCGACATCAACGGTGTCACCCAC GTGGTCAACTACCAGTGCCCCGAAGACGAGAACGTCTATCTGCACCGCATCGGCCGCACCGGTCGGGCGGGCGAGAGCGG GGTGGCCATCACCTTCGTCGACTGGGACGACCTGCCGCGGTGGACGCTCGTCAACAAGGCGCTCGCCCTGCCGTTCGATG GCCCGGTGGAAACCTATTCCACCTCCCCCCACCTGTACGAGGCGCTCGGCATCCCGGCGGGCGCGAAGGGCACCCTGCCG CACGCGGCGCGGACCCGCGCCGGGCTCGCGGCCGAGGACATCGAGGATCTCGGGCAGTCCGGTCGCGGCGGGCGCCGCGG CTCGCGGACCGGGCGTGACCAGGACCGTTCCGAGCCGGCGGCGGTGCCGACCCGGACTCGCGCCCGTCGGCGCACCCGCG GCGGTGGTGCGGCGGCCGCGGGTGCGGGGCTGGCCATCGCCGCGGACCCGGCGGACCCGGCGGACCCGGTCGACGAGGAC GGCCGGAAGGCCGGCGCACCCGTGGTGGACGGTGCCGGGCAGACCGGGCTGGTCGAGTTCACCGGGACCGCCCCGCTCAC CGACACGGACACCGACACCGCCCGCGTCGTCTCCGCCCTGGCCTCGGAGACGGGCGTCGAGGCCGAGGAGTCGCCGCGCC GCCGGCGCCGGCGGCGCGGCAACCGTGGCCGCGGCACGGGCACGATGCGGGAGGCCGGCGACGGCACCGAGGCCGACGCC GACGCGCCACCCCGAGCCGAGTCGGCCTGA
Upstream 100 bases:
>100_bases CGATTCTGACACCCGCCGCAGTCGCTGTCGGCAAACACTCCTGCCAAGGAGCCCCCACCCGGGGTTACACCGGCTATGCT GGGGGCAGCCAGGGGTCGTT
Downstream 100 bases:
>100_bases CACCCCGGCCCCCGGCCCCGCATACCCGCGGGGGTCGCCGGTCCGCGGGGGTCGTCAGCCCGCGGGCCGAAAATGCAGGC CCAGCCGGACCCAGCTCAGC
Product: DEAD/DEAH box helicase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>649_residues MSPRPPCSRRRLVTCAPRVAIEGTGAHGFSGRGRRAAHRERVQRRHRSEKTRSVPLSVTAEVPTDDLTPYEPQTTPSTPG SPAAPTFAELGVRAETVSALTEAGIVHAFPIQELTLPLALARNDIIGQARTGTGKTLAFGVPVVQTVLAAKEGADGRPQA LVVVPTRELCVQVTADVTRAGARRGLRVLSVYGGRAYEPQLSALRAGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEA DEMLDLGFLPDVERIMSQLPTERQTMLFSATMPGPVISLARRFMKRPVHVRAEQPDEGRTVPTTRQHVFRAHALDKMEVL ARVLQAGGRGLAMVFVRTRRTADKVAEDLAKRGFAAAAVHGDLGQGQREQALRAFRSGKVDVLVATDVAARGIDINGVTH VVNYQCPEDENVYLHRIGRTGRAGESGVAITFVDWDDLPRWTLVNKALALPFDGPVETYSTSPHLYEALGIPAGAKGTLP HAARTRAGLAAEDIEDLGQSGRGGRRGSRTGRDQDRSEPAAVPTRTRARRRTRGGGAAAAGAGLAIAADPADPADPVDED GRKAGAPVVDGAGQTGLVEFTGTAPLTDTDTDTARVVSALASETGVEAEESPRRRRRRRGNRGRGTGTMREAGDGTEADA DAPPRAESA
Sequences:
NA
Specific function: NA
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA