Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609158
Identifier: 86609158
GI number: 86609158
Start: 1779761
End: 1780156
Strand: Reverse
Name: 86609158
Synonym: CYB_1698
Alternate gene names: NA
Gene position: 1780156-1779761 (Counterclockwise)
Preceding gene: 86609159
Following gene: 86609157
Centisome position: 58.43
GC content: 51.52
Gene sequence:
>396_bases ATGATCCTGGTGGACAGCACCATCTGGATTGATTACTTCAACGGCATTTCATCGCTTCACACCGACTATCTGGATTGGGC CCTGGATCAAACTCTTATCCTGGTGGGCGACCTGATTTTGGCAGAAGTCTTGCAGGGCTTTCGCAAAGATGCCGATTTCG AGCAGGCTCGCTGTGCTCTGGTGAAATTGCATCAGGTGCAAATGGTTAACCCCTCCCTGGCGGTGAAAAGTGCGCAGAAC TTTCGCTTGTTGCGTCGCAAAGGCGTGACGGTGCGCAAAACAATAGACAGTTTGATTGCCACTTGGTGCATTGAGAACAA TGTTCCGCTCCTCCACCACGACAGTGACTTCGATGGCTACGAGGCGCATCTAGGATTGCGGGTTATTCGTCCATGA
Upstream 100 bases:
>100_bases TTCGCCTACACGAGCAAGCTGAGATCCGCAACTTACGCGGCAAGTTGAAATGGGAGGGCAATTTGCAGCAGCAACGCCTG TCGTGCCTGCAGGACTGAGG
Downstream 100 bases:
>100_bases GGCAGAGGTGGCCTTCTGCAGACCAGTTTTCTCTTGACATACCCCCTGCCTAAAGGCAAGGGATTCTGGTTCCTGCATTC GGAGAACGCTGCAGCCGTCG
Product: PilT domain-containing protein
Products: NA
Alternate protein names: PilT Domain-Containing Protein; PilT Protein-Like; PilT Protein-Like Protein; Pilt Protein Domain Protein; PilT-Like Protein
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCALVKLHQVQMVNPSLAVKSAQN FRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGYEAHLGLRVIRP
Sequences:
>Translated_131_residues MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCALVKLHQVQMVNPSLAVKSAQN FRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGYEAHLGLRVIRP >Mature_131_residues MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCALVKLHQVQMVNPSLAVKSAQN FRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGYEAHLGLRVIRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14945; Mature: 14945
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCAL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VKLHQVQMVNPSLAVKSAQNFRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGY HHHHHHEECCCHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCE EAHLGLRVIRP EEEECEEEECC >Mature Secondary Structure MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCAL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VKLHQVQMVNPSLAVKSAQNFRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGY HHHHHHEECCCHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCE EAHLGLRVIRP EEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA