Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609158

Identifier: 86609158

GI number: 86609158

Start: 1779761

End: 1780156

Strand: Reverse

Name: 86609158

Synonym: CYB_1698

Alternate gene names: NA

Gene position: 1780156-1779761 (Counterclockwise)

Preceding gene: 86609159

Following gene: 86609157

Centisome position: 58.43

GC content: 51.52

Gene sequence:

>396_bases
ATGATCCTGGTGGACAGCACCATCTGGATTGATTACTTCAACGGCATTTCATCGCTTCACACCGACTATCTGGATTGGGC
CCTGGATCAAACTCTTATCCTGGTGGGCGACCTGATTTTGGCAGAAGTCTTGCAGGGCTTTCGCAAAGATGCCGATTTCG
AGCAGGCTCGCTGTGCTCTGGTGAAATTGCATCAGGTGCAAATGGTTAACCCCTCCCTGGCGGTGAAAAGTGCGCAGAAC
TTTCGCTTGTTGCGTCGCAAAGGCGTGACGGTGCGCAAAACAATAGACAGTTTGATTGCCACTTGGTGCATTGAGAACAA
TGTTCCGCTCCTCCACCACGACAGTGACTTCGATGGCTACGAGGCGCATCTAGGATTGCGGGTTATTCGTCCATGA

Upstream 100 bases:

>100_bases
TTCGCCTACACGAGCAAGCTGAGATCCGCAACTTACGCGGCAAGTTGAAATGGGAGGGCAATTTGCAGCAGCAACGCCTG
TCGTGCCTGCAGGACTGAGG

Downstream 100 bases:

>100_bases
GGCAGAGGTGGCCTTCTGCAGACCAGTTTTCTCTTGACATACCCCCTGCCTAAAGGCAAGGGATTCTGGTTCCTGCATTC
GGAGAACGCTGCAGCCGTCG

Product: PilT domain-containing protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein; PilT Protein-Like; PilT Protein-Like Protein; Pilt Protein Domain Protein; PilT-Like Protein

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCALVKLHQVQMVNPSLAVKSAQN
FRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGYEAHLGLRVIRP

Sequences:

>Translated_131_residues
MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCALVKLHQVQMVNPSLAVKSAQN
FRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGYEAHLGLRVIRP
>Mature_131_residues
MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCALVKLHQVQMVNPSLAVKSAQN
FRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGYEAHLGLRVIRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14945; Mature: 14945

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCAL
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VKLHQVQMVNPSLAVKSAQNFRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGY
HHHHHHEECCCHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCE
EAHLGLRVIRP
EEEECEEEECC
>Mature Secondary Structure
MILVDSTIWIDYFNGISSLHTDYLDWALDQTLILVGDLILAEVLQGFRKDADFEQARCAL
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VKLHQVQMVNPSLAVKSAQNFRLLRRKGVTVRKTIDSLIATWCIENNVPLLHHDSDFDGY
HHHHHHEECCCHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCE
EAHLGLRVIRP
EEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA