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The map label for this gene is dcd [H]

Identifier: 86609130

GI number: 86609130

Start: 1748343

End: 1748924

Strand: Reverse

Name: dcd [H]

Synonym: CYB_1670

Alternate gene names: 86609130

Gene position: 1748924-1748343 (Counterclockwise)

Preceding gene: 86609131

Following gene: 86609129

Centisome position: 57.4

GC content: 58.25

Gene sequence:

>582_bases
ATGTTGAAAAACGACCGCTGGATCTGTGAGCAAGCGCGGCGAGGGATGATTGAGCCCTTCTGTCCTGAGCTGGTGCGCGC
TGTTGAGTCTCGGCCTGTTTTGAGTTACGGGCTGTCCTCCTATGGCTACGACATCCGCCTGTCGCCGGTGGAGTTCAAGA
TCTTTCGCCATGTGCCCGGCACGGTGGTGGATCCCAAGCGGTTTAACCCCAAGAATCTGGAAGCGGTGGAGCTGCACCAC
GACGAGATGGGGGATTACTTTATCATCCCGGCCCACTCCTATGGGTTGGGGGTGTCTTTGGAGCGGCTGCAAGTTCCGGA
TAACATTACCGTGATCTGCATTGGCAAATCTTCCTATGCCAGGGTGGGCCTGATTGCCAACCTGACGCCCGCTGAGGCGG
GATGGCGGGGTTATCTCACCCTGGAGTTTTCCAACGCCTCCAGCGCTGACTGCCGTGTGTACGCTAACGAAGGGGTGGTC
CAGCTTCTTTTTCTGGAAGGGGATCCCTGCCAAGTGACCTACGCCGACCGCGCTGGCAAGTATCAGGATCAGCCGCAGCA
GGTGGTGGTGGCCAAGGTTTAG

Upstream 100 bases:

>100_bases
GACCTAGGCAACACGGGTCGCGTCAGGGGGGCGGAGTCCCAATAAGACTGGAGCTTGTCCACCAGATGTGCCCTCACTCT
CCAGGAAGCCGGCTGTAGCC

Downstream 100 bases:

>100_bases
CTGCTTCCCTCAAAAGGGAGAGGGTTGGCGGGATCCGGTTGGCTATGCTGGATCCACGTAGAACCCCATCTTGATTCATC
TCCATGCCTGACTCTTTTTC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLKNDRWICEQARRGMIEPFCPELVRAVESRPVLSYGLSSYGYDIRLSPVEFKIFRHVPGTVVDPKRFNPKNLEAVELHH
DEMGDYFIIPAHSYGLGVSLERLQVPDNITVICIGKSSYARVGLIANLTPAEAGWRGYLTLEFSNASSADCRVYANEGVV
QLLFLEGDPCQVTYADRAGKYQDQPQQVVVAKV

Sequences:

>Translated_193_residues
MLKNDRWICEQARRGMIEPFCPELVRAVESRPVLSYGLSSYGYDIRLSPVEFKIFRHVPGTVVDPKRFNPKNLEAVELHH
DEMGDYFIIPAHSYGLGVSLERLQVPDNITVICIGKSSYARVGLIANLTPAEAGWRGYLTLEFSNASSADCRVYANEGVV
QLLFLEGDPCQVTYADRAGKYQDQPQQVVVAKV
>Mature_193_residues
MLKNDRWICEQARRGMIEPFCPELVRAVESRPVLSYGLSSYGYDIRLSPVEFKIFRHVPGTVVDPKRFNPKNLEAVELHH
DEMGDYFIIPAHSYGLGVSLERLQVPDNITVICIGKSSYARVGLIANLTPAEAGWRGYLTLEFSNASSADCRVYANEGVV
QLLFLEGDPCQVTYADRAGKYQDQPQQVVVAKV

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962 [H]

Pfam domain/function: NA

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21639; Mature: 21639

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNDRWICEQARRGMIEPFCPELVRAVESRPVLSYGLSSYGYDIRLSPVEFKIFRHVPG
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEECHHHCCCEEEECCEEEEEEECCCC
TVVDPKRFNPKNLEAVELHHDEMGDYFIIPAHSYGLGVSLERLQVPDNITVICIGKSSYA
CEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCE
RVGLIANLTPAEAGWRGYLTLEFSNASSADCRVYANEGVVQLLFLEGDPCQVTYADRAGK
EEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCEEEECCCCCC
YQDQPQQVVVAKV
CCCCCCEEEEEEC
>Mature Secondary Structure
MLKNDRWICEQARRGMIEPFCPELVRAVESRPVLSYGLSSYGYDIRLSPVEFKIFRHVPG
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEECHHHCCCEEEECCEEEEEEECCCC
TVVDPKRFNPKNLEAVELHHDEMGDYFIIPAHSYGLGVSLERLQVPDNITVICIGKSSYA
CEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCE
RVGLIANLTPAEAGWRGYLTLEFSNASSADCRVYANEGVVQLLFLEGDPCQVTYADRAGK
EEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCEEEECCCCCC
YQDQPQQVVVAKV
CCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA