Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608731

Identifier: 86608731

GI number: 86608731

Start: 1309437

End: 1310912

Strand: Direct

Name: 86608731

Synonym: CYB_1255

Alternate gene names: NA

Gene position: 1309437-1310912 (Clockwise)

Preceding gene: 86608730

Following gene: 86608732

Centisome position: 42.98

GC content: 62.67

Gene sequence:

>1476_bases
ATGAACATTGCCGCTGAGATTACGCCGCTCTTTTTGCTGGGAACGCTGGCCTTTTTGGGTTGGGGCTTCTGGAGAGCCCG
TCGGCGGGGATCCTTAGCCGTTTGGGTGTGGTTACAGGGATCCCTGCTGCTGCTGCCCTGGGTGGTCTTCCTAGGGCTGT
TGCTGCTGGGGATCTACCTCAATTTTGCAGGCTTCCTGGTGTTGCTGTTGGTCTTTACAGGGCTTTACATTGCTGTGGGG
CGCAAGACCCGCCAGTTGGCCCAGCAGGAGCTGCAGGCCCGTCGCGAGCAGTTGGCTCGTCTGGAAGAGCAGGGGGAAGC
CCCTTCGGCAGGGGAGGCGCCTTTGGAAGCGCCTGCGGTTCTGCAGCGGATCTCGGCTGAGGATCTGCAGGCCATTCAGT
CTATTTTCGGCCTCGATACCTTTTTCGTCACCGAGACCGTCCCCTATGGGGAAGGGGCAATTTTTAAGGGCAACCTGCGC
CAGGAGGCGGAGGTGGTGGTACCCCTGCTGGTGGAGAAGCTCAAAGAGCAGGTGGGCAGTCGCTACCAGCTCTTTTTGGT
GGAGGATCCGGCGGAAAAGCCGGCGGTGGTGGTCTTGCCGGATCCCATCGTCAATTACCGCGCTTCCGTGGGGGCGCAGA
TCCTGGCGGGGGCGTTGCTGGTCTTCAGCTTCGTCGCCACGTTGGAGGTGGGAGCCAATCTCTTGGGCTTCCGGCTGTTG
GATGCGCCAGGGCGCTGGGTGGAAGCCCTGCCGGTGGCGGCCGGGATCTTCGCCATCTTGCTGGTGCACGAGACCGGACA
CCGCTGGATGGCGGGCAAGTACGGCGTGCGCCTCAGCCCTGCCTTTGTTATCCCCAGCTTGGGCATTGGCACGCTGGGAT
CCCTAAACCGCATCCAATCGCCGGTGCCCAGCCGCAAGGCCCTCTTCGACATTGCCTTTGCCGGCCCGGCAGCGAGCGGG
ATCCTGTCGCTGCTGGTGCTCTTGGCTGGCCTGAAGCTCTCCGGCTCCGAGGGTCTGTATGTGCCCACGGAGATCTTCCG
CAGCTCCATCCTGGTAGGCACCCTAGCGCGGCTGGTGCTGGGATCCCAGTTGCAGGCGGAGCTGGTTCCCATTCATCCTT
TTGTTGCCGTGGGCTGGATTGGCCTGGCAATCACCGCCTTGAGCCTGCTGCCGGCAGGGCAGCTGGACGGGGGTCGCATT
GTGCAGGCGGTGTACGGGCGGAAGACGGCGGCCCGCGCCACCTTCATCACCCTGATTGCCTTGGCGGTGGCGGCCATCAG
CAACGTCTTGGCCCTCTACTGGGCGCTGCTGATCCTGTTCATCGCCCGCGAGCCAGAGCGTCCACCGCAGGATGAGATTA
CTGAAACCGACGGTCAGCGGGATGCTTTGGCATTGCTGGCCCTCTTTTTGATGGTCATGACCCTGTTGCCGATTGCTCCG
GCCTTGGCGGGCTTTCTCAATTTCCCCAACGGCTGA

Upstream 100 bases:

>100_bases
ACCTGTGGGAGCAGCCGGAGCCCCGTTTTGAAGGAACGGCTGTTTCTGCTTGAGCCGTCTTGCCCTCAGCTTGGTACCCG
TACAGCCTCATAGGTCAGCC

Downstream 100 bases:

>100_bases
TGGGGTAGAGGCCCAGGATCCGCCGGCGAGAGGAGCTCACTGTGTCTGGACCGGGGAAAGGCTTTGGCCTAGGCAGAGCT
GGAAAGGACAGAGGAGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; Membrane-Associated Zn-Dependent Protease; M50 Family Peptidase; Membrane-Associated Metallopeptidase; M50B Family Peptidase; Metalloprotease; M50 Family Metallopeptidase; S2P Family Metalloprotease

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MNIAAEITPLFLLGTLAFLGWGFWRARRRGSLAVWVWLQGSLLLLPWVVFLGLLLLGIYLNFAGFLVLLLVFTGLYIAVG
RKTRQLAQQELQARREQLARLEEQGEAPSAGEAPLEAPAVLQRISAEDLQAIQSIFGLDTFFVTETVPYGEGAIFKGNLR
QEAEVVVPLLVEKLKEQVGSRYQLFLVEDPAEKPAVVVLPDPIVNYRASVGAQILAGALLVFSFVATLEVGANLLGFRLL
DAPGRWVEALPVAAGIFAILLVHETGHRWMAGKYGVRLSPAFVIPSLGIGTLGSLNRIQSPVPSRKALFDIAFAGPAASG
ILSLLVLLAGLKLSGSEGLYVPTEIFRSSILVGTLARLVLGSQLQAELVPIHPFVAVGWIGLAITALSLLPAGQLDGGRI
VQAVYGRKTAARATFITLIALAVAAISNVLALYWALLILFIAREPERPPQDEITETDGQRDALALLALFLMVMTLLPIAP
ALAGFLNFPNG

Sequences:

>Translated_491_residues
MNIAAEITPLFLLGTLAFLGWGFWRARRRGSLAVWVWLQGSLLLLPWVVFLGLLLLGIYLNFAGFLVLLLVFTGLYIAVG
RKTRQLAQQELQARREQLARLEEQGEAPSAGEAPLEAPAVLQRISAEDLQAIQSIFGLDTFFVTETVPYGEGAIFKGNLR
QEAEVVVPLLVEKLKEQVGSRYQLFLVEDPAEKPAVVVLPDPIVNYRASVGAQILAGALLVFSFVATLEVGANLLGFRLL
DAPGRWVEALPVAAGIFAILLVHETGHRWMAGKYGVRLSPAFVIPSLGIGTLGSLNRIQSPVPSRKALFDIAFAGPAASG
ILSLLVLLAGLKLSGSEGLYVPTEIFRSSILVGTLARLVLGSQLQAELVPIHPFVAVGWIGLAITALSLLPAGQLDGGRI
VQAVYGRKTAARATFITLIALAVAAISNVLALYWALLILFIAREPERPPQDEITETDGQRDALALLALFLMVMTLLPIAP
ALAGFLNFPNG
>Mature_491_residues
MNIAAEITPLFLLGTLAFLGWGFWRARRRGSLAVWVWLQGSLLLLPWVVFLGLLLLGIYLNFAGFLVLLLVFTGLYIAVG
RKTRQLAQQELQARREQLARLEEQGEAPSAGEAPLEAPAVLQRISAEDLQAIQSIFGLDTFFVTETVPYGEGAIFKGNLR
QEAEVVVPLLVEKLKEQVGSRYQLFLVEDPAEKPAVVVLPDPIVNYRASVGAQILAGALLVFSFVATLEVGANLLGFRLL
DAPGRWVEALPVAAGIFAILLVHETGHRWMAGKYGVRLSPAFVIPSLGIGTLGSLNRIQSPVPSRKALFDIAFAGPAASG
ILSLLVLLAGLKLSGSEGLYVPTEIFRSSILVGTLARLVLGSQLQAELVPIHPFVAVGWIGLAITALSLLPAGQLDGGRI
VQAVYGRKTAARATFITLIALAVAAISNVLALYWALLILFIAREPERPPQDEITETDGQRDALALLALFLMVMTLLPIAP
ALAGFLNFPNG

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52769; Mature: 52769

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAAEITPLFLLGTLAFLGWGFWRARRRGSLAVWVWLQGSLLLLPWVVFLGLLLLGIYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
NFAGFLVLLLVFTGLYIAVGRKTRQLAQQELQARREQLARLEEQGEAPSAGEAPLEAPAV
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LQRISAEDLQAIQSIFGLDTFFVTETVPYGEGAIFKGNLRQEAEVVVPLLVEKLKEQVGS
HHHHCHHHHHHHHHHHCCHHHHHEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCC
RYQLFLVEDPAEKPAVVVLPDPIVNYRASVGAQILAGALLVFSFVATLEVGANLLGFRLL
CEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEE
DAPGRWVEALPVAAGIFAILLVHETGHRWMAGKYGVRLSPAFVIPSLGIGTLGSLNRIQS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEECCHHCCCCCCCCCCCCHHHHCC
PVPSRKALFDIAFAGPAASGILSLLVLLAGLKLSGSEGLYVPTEIFRSSILVGTLARLVL
CCCCHHHHEEHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHH
GSQLQAELVPIHPFVAVGWIGLAITALSLLPAGQLDGGRIVQAVYGRKTAARATFITLIA
CCCHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
LAVAAISNVLALYWALLILFIAREPERPPQDEITETDGQRDALALLALFLMVMTLLPIAP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALAGFLNFPNG
HHHHHHCCCCC
>Mature Secondary Structure
MNIAAEITPLFLLGTLAFLGWGFWRARRRGSLAVWVWLQGSLLLLPWVVFLGLLLLGIYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
NFAGFLVLLLVFTGLYIAVGRKTRQLAQQELQARREQLARLEEQGEAPSAGEAPLEAPAV
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LQRISAEDLQAIQSIFGLDTFFVTETVPYGEGAIFKGNLRQEAEVVVPLLVEKLKEQVGS
HHHHCHHHHHHHHHHHCCHHHHHEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCC
RYQLFLVEDPAEKPAVVVLPDPIVNYRASVGAQILAGALLVFSFVATLEVGANLLGFRLL
CEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEE
DAPGRWVEALPVAAGIFAILLVHETGHRWMAGKYGVRLSPAFVIPSLGIGTLGSLNRIQS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEECCHHCCCCCCCCCCCCHHHHCC
PVPSRKALFDIAFAGPAASGILSLLVLLAGLKLSGSEGLYVPTEIFRSSILVGTLARLVL
CCCCHHHHEEHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHHHH
GSQLQAELVPIHPFVAVGWIGLAITALSLLPAGQLDGGRIVQAVYGRKTAARATFITLIA
CCCHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
LAVAAISNVLALYWALLILFIAREPERPPQDEITETDGQRDALALLALFLMVMTLLPIAP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALAGFLNFPNG
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA