Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608602

Identifier: 86608602

GI number: 86608602

Start: 1161074

End: 1161361

Strand: Reverse

Name: 86608602

Synonym: CYB_1124

Alternate gene names: NA

Gene position: 1161361-1161074 (Counterclockwise)

Preceding gene: 86608603

Following gene: 86608598

Centisome position: 38.12

GC content: 55.21

Gene sequence:

>288_bases
ATGGATCGAAAAACAGTCTGGTTTGCCCTAAAATTGATGCTGGCTGCTGCCGGGATCAGCACAGCCATCAAGTATGGTGG
CCCTTACTTGGCCTTGCCGGAGCAAATGCCAGTGGTGGTCGGGATGATCGTTTTGCCCACCTTGATCATGGCCGGGATCC
TGTGGCGCTGGCAAATGCAGTCTCCTCTATCCAAAACTCCCCTACAAGCCGGCAAGGGATCCCTGGGAATTGAAGATGAT
AGAGCCTTCACCCCCAGCCCTTCTCCCAGGGGAGAGAGGGAAGTCTGA

Upstream 100 bases:

>100_bases
TCGGGTACCTGAGGAGCTAGAAACCATTGCCGGCATTCTCACTGCCATGGTCAGCAACCCCAGCCCATCGTGAATTAAAA
GCGTGAATTAAAAGTAAGTC

Downstream 100 bases:

>100_bases
ACTGCTGGACATGGAAGGCTGCCCAGATCCCTTGATGGGTGGGGGGAAGTCTATCGGGATGGGCTGGGATCCCTTGAACC
CCTACTGCTGGGTAAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MDRKTVWFALKLMLAAAGISTAIKYGGPYLALPEQMPVVVGMIVLPTLIMAGILWRWQMQSPLSKTPLQAGKGSLGIEDD
RAFTPSPSPRGEREV

Sequences:

>Translated_95_residues
MDRKTVWFALKLMLAAAGISTAIKYGGPYLALPEQMPVVVGMIVLPTLIMAGILWRWQMQSPLSKTPLQAGKGSLGIEDD
RAFTPSPSPRGEREV
>Mature_95_residues
MDRKTVWFALKLMLAAAGISTAIKYGGPYLALPEQMPVVVGMIVLPTLIMAGILWRWQMQSPLSKTPLQAGKGSLGIEDD
RAFTPSPSPRGEREV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10354; Mature: 10354

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKTVWFALKLMLAAAGISTAIKYGGPYLALPEQMPVVVGMIVLPTLIMAGILWRWQMQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SPLSKTPLQAGKGSLGIEDDRAFTPSPSPRGEREV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRKTVWFALKLMLAAAGISTAIKYGGPYLALPEQMPVVVGMIVLPTLIMAGILWRWQMQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SPLSKTPLQAGKGSLGIEDDRAFTPSPSPRGEREV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA