| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608586
Identifier: 86608586
GI number: 86608586
Start: 1146007
End: 1146399
Strand: Reverse
Name: 86608586
Synonym: CYB_1108
Alternate gene names: NA
Gene position: 1146399-1146007 (Counterclockwise)
Preceding gene: 86608587
Following gene: 86608583
Centisome position: 37.63
GC content: 59.8
Gene sequence:
>393_bases ATGGGATCCGACTTCAACGTGGAATCGGTGCTGGAGGCGGTGCTCGGCAAGCTGAAGGTTTTGGCGGAAACGGGACAAAC CTTTGGTCAGCCGATCACTATTGGTGAGACGATTATTGTCCCTTACATGTCCTTGCATTTTGGCTTGGGTGGGGGAGGGG GTAACTTTGGAAAGACTGCTCCTGGCTGTCGCGGCAACGGCGGGGATCCGGCCAGTCTGTTCGGGGGAGCGGGGGGTGGG GTGCGCATCGAGCCAGTTGGCTTTCTGGTGATCCGAGGCGAGCGAGTGGAGCTGCTGACCACCGTCCAGAAGCCCGACCA GTGGAACCAACTCAGCGAGACTCTGGTGCCCCTGTTGCAGCAGTGGCTGCAAAATCGTGCCGGCAACTCCTGA
Upstream 100 bases:
>100_bases AGGGGAGTTTCTTGGGCTTTCTCTCTTGGGCGTGGCTGCACTAGCCTGGGAAGGTACTGCGCGCCATTTGCCCGAGCGTC TGGTGGGCTAGTCAACGGAG
Downstream 100 bases:
>100_bases AGGGACTAGCCGCGAATGGAGAGGCGGGATCCCTGGGGAGAGGGCTGTATCTCGATGCGGTGGGGGAAAGCATCCTGCAG GCTGGGGATGTGGGTAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MGSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTAPGCRGNGGDPASLFGGAGGG VRIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQQWLQNRAGNS
Sequences:
>Translated_130_residues MGSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTAPGCRGNGGDPASLFGGAGGG VRIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQQWLQNRAGNS >Mature_129_residues GSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTAPGCRGNGGDPASLFGGAGGGV RIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQQWLQNRAGNS
Specific function: Unknown
COG id: COG3874
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13595; Mature: 13464
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC PGCRGNGGDPASLFGGAGGGVRIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQ CCCCCCCCCCHHHCCCCCCCEEECCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHH QWLQNRAGNS HHHHHHCCCC >Mature Secondary Structure GSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC PGCRGNGGDPASLFGGAGGGVRIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQ CCCCCCCCCCHHHCCCCCCCEEECCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHH QWLQNRAGNS HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA