Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608586

Identifier: 86608586

GI number: 86608586

Start: 1146007

End: 1146399

Strand: Reverse

Name: 86608586

Synonym: CYB_1108

Alternate gene names: NA

Gene position: 1146399-1146007 (Counterclockwise)

Preceding gene: 86608587

Following gene: 86608583

Centisome position: 37.63

GC content: 59.8

Gene sequence:

>393_bases
ATGGGATCCGACTTCAACGTGGAATCGGTGCTGGAGGCGGTGCTCGGCAAGCTGAAGGTTTTGGCGGAAACGGGACAAAC
CTTTGGTCAGCCGATCACTATTGGTGAGACGATTATTGTCCCTTACATGTCCTTGCATTTTGGCTTGGGTGGGGGAGGGG
GTAACTTTGGAAAGACTGCTCCTGGCTGTCGCGGCAACGGCGGGGATCCGGCCAGTCTGTTCGGGGGAGCGGGGGGTGGG
GTGCGCATCGAGCCAGTTGGCTTTCTGGTGATCCGAGGCGAGCGAGTGGAGCTGCTGACCACCGTCCAGAAGCCCGACCA
GTGGAACCAACTCAGCGAGACTCTGGTGCCCCTGTTGCAGCAGTGGCTGCAAAATCGTGCCGGCAACTCCTGA

Upstream 100 bases:

>100_bases
AGGGGAGTTTCTTGGGCTTTCTCTCTTGGGCGTGGCTGCACTAGCCTGGGAAGGTACTGCGCGCCATTTGCCCGAGCGTC
TGGTGGGCTAGTCAACGGAG

Downstream 100 bases:

>100_bases
AGGGACTAGCCGCGAATGGAGAGGCGGGATCCCTGGGGAGAGGGCTGTATCTCGATGCGGTGGGGGAAAGCATCCTGCAG
GCTGGGGATGTGGGTAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MGSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTAPGCRGNGGDPASLFGGAGGG
VRIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQQWLQNRAGNS

Sequences:

>Translated_130_residues
MGSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTAPGCRGNGGDPASLFGGAGGG
VRIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQQWLQNRAGNS
>Mature_129_residues
GSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTAPGCRGNGGDPASLFGGAGGGV
RIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQQWLQNRAGNS

Specific function: Unknown

COG id: COG3874

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13595; Mature: 13464

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PGCRGNGGDPASLFGGAGGGVRIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQ
CCCCCCCCCCHHHCCCCCCCEEECCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHH
QWLQNRAGNS
HHHHHHCCCC
>Mature Secondary Structure 
GSDFNVESVLEAVLGKLKVLAETGQTFGQPITIGETIIVPYMSLHFGLGGGGGNFGKTA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PGCRGNGGDPASLFGGAGGGVRIEPVGFLVIRGERVELLTTVQKPDQWNQLSETLVPLLQ
CCCCCCCCCCHHHCCCCCCCEEECCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHH
QWLQNRAGNS
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA