The gene/protein map for NC_012560 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608547

Identifier: 86608547

GI number: 86608547

Start: 1107299

End: 1107664

Strand: Direct

Name: 86608547

Synonym: CYB_1069

Alternate gene names: NA

Gene position: 1107299-1107664 (Clockwise)

Preceding gene: 86608546

Following gene: 86608548

Centisome position: 36.34

GC content: 53.83

Gene sequence:

>366_bases
ATGTCTTCTCAGTCTCCCCCAGAACCAACCCCAGAATCGCCGGAAATGGAAGCCCTCAAAAGCCAACTGGCCGAAGCTCA
ACAACTCTTGCAAGACTACCAAAACAAAGTCTCTGCCCTGCAAGCTCAATTGCAGCAGGTTACTGCCCATCGGGACGAAT
TGCAAAAGGCGCTGGCGCAGTTGCAAGCGGTTGCGGACGAGCGGGCCAAAACCATCCAGGAGTTACAGAACCCCAGAGGA
CAAGCCCCCATTCAGCCCAAACCCCAATCCTCACCTCTGCACGCGCAAAAGAAGATTATGAATCGGCCCATCTTCGACAA
CGTATCGGCCACCGATGAAAGCATGCCCCCCTATTTGTTGGATTGA

Upstream 100 bases:

>100_bases
TTCCCGCCGCTCCGGCGGAATTCGGCGCAAGGCCGGTGCTAAAACCAGTTCAGAGCCCACCTCCGCAGAGTCTACTCCCA
CAGGCGAGGAGCCGACAACG

Downstream 100 bases:

>100_bases
CCGGGATGGAAGGGATCCCTGAGGGCGTGATTTGGATGGGGTCTCCACCTGTTCTGCTCCCTCCTGTTTTCAGCCCGACC
TGTGCTTTTTTCCCTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSSQSPPEPTPESPEMEALKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQLQAVADERAKTIQELQNPRG
QAPIQPKPQSSPLHAQKKIMNRPIFDNVSATDESMPPYLLD

Sequences:

>Translated_121_residues
MSSQSPPEPTPESPEMEALKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQLQAVADERAKTIQELQNPRG
QAPIQPKPQSSPLHAQKKIMNRPIFDNVSATDESMPPYLLD
>Mature_120_residues
SSQSPPEPTPESPEMEALKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQLQAVADERAKTIQELQNPRGQ
APIQPKPQSSPLHAQKKIMNRPIFDNVSATDESMPPYLLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13466; Mature: 13335

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQSPPEPTPESPEMEALKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAVADERAKTIQELQNPRGQAPIQPKPQSSPLHAQKKIMNRPIFDNVSATDESMPPYLL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
D
C
>Mature Secondary Structure 
SSQSPPEPTPESPEMEALKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAVADERAKTIQELQNPRGQAPIQPKPQSSPLHAQKKIMNRPIFDNVSATDESMPPYLL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA