The gene/protein map for NC_011566 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608540

Identifier: 86608540

GI number: 86608540

Start: 1100018

End: 1100590

Strand: Direct

Name: 86608540

Synonym: CYB_1062

Alternate gene names: NA

Gene position: 1100018-1100590 (Clockwise)

Preceding gene: 86608539

Following gene: 86608546

Centisome position: 36.11

GC content: 56.89

Gene sequence:

>573_bases
ATGATTGCCCTCAACCTGCAGCCGGCTGTGAATTTAACCGATGAAGTTTTCGAGCAGCTTTGTCGGCAGAATCCTGAGCT
GCGCCTGGAACGCACCGCCCAAGGAGAACTGATCGCCATGGCCCCTGCAGGCAGCGAAAGTGGATTCCGCAATGCCGACC
TACTGGGCCAACTTTGGCAGTGGAATCGACGCAAGAACTTAGGTCTTGTCTTCGACTCTTCTGCAGGTTTTGCCCTGCCC
AATGGGGCCATTCGCTCTCCCGATGCCGCCTGGGTTGCCAAAGAGCGCTGGCAGCAGCTCACCCCAGAGCAGCGCCGTCG
TTTTGCTCCCCTCTGCCCTGACTTTGTGCTGGAACTGAAGTCCCCTACCGATGAGCTGGCCACCCTTGAGGCCAAGTTGC
AGGAGTTCCTAGACAACGGATCCCAACTGGGCTGGTTAATTGACCCGGAAAGTCGCCAAGTCCACGTCTATCGCCCCGGT
CAGCCGGTACAAGTTTTGGAGCAGCCTGTGAGTTTGTCTGGGGATCCCGTTCTTCCTGGCTTTGTTATGGATCTCACCCT
AATCTGGGGATAA

Upstream 100 bases:

>100_bases
CTTGTCTGGGGATCCCGTTCTCCCTGGCTTTGTGGTGGATCTCACCTTAATCTGGGAATAGTGCTCCCCACGCTCTAAAA
CTGCCCACCAGGATGAGCTC

Downstream 100 bases:

>100_bases
CCGACCCACCCCATGACTCCAAATTTCATTTTTCCCACTCTGGGGAGAAACGCCAGGGATCCCCAAGCTGCTTCGCTGCA
ATTCAAGTAACCCTGCTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MIALNLQPAVNLTDEVFEQLCRQNPELRLERTAQGELIAMAPAGSESGFRNADLLGQLWQWNRRKNLGLVFDSSAGFALP
NGAIRSPDAAWVAKERWQQLTPEQRRRFAPLCPDFVLELKSPTDELATLEAKLQEFLDNGSQLGWLIDPESRQVHVYRPG
QPVQVLEQPVSLSGDPVLPGFVMDLTLIWG

Sequences:

>Translated_190_residues
MIALNLQPAVNLTDEVFEQLCRQNPELRLERTAQGELIAMAPAGSESGFRNADLLGQLWQWNRRKNLGLVFDSSAGFALP
NGAIRSPDAAWVAKERWQQLTPEQRRRFAPLCPDFVLELKSPTDELATLEAKLQEFLDNGSQLGWLIDPESRQVHVYRPG
QPVQVLEQPVSLSGDPVLPGFVMDLTLIWG
>Mature_190_residues
MIALNLQPAVNLTDEVFEQLCRQNPELRLERTAQGELIAMAPAGSESGFRNADLLGQLWQWNRRKNLGLVFDSSAGFALP
NGAIRSPDAAWVAKERWQQLTPEQRRRFAPLCPDFVLELKSPTDELATLEAKLQEFLDNGSQLGWLIDPESRQVHVYRPG
QPVQVLEQPVSLSGDPVLPGFVMDLTLIWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21286; Mature: 21286

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALNLQPAVNLTDEVFEQLCRQNPELRLERTAQGELIAMAPAGSESGFRNADLLGQLWQ
CEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
WNRRKNLGLVFDSSAGFALPNGAIRSPDAAWVAKERWQQLTPEQRRRFAPLCPDFVLELK
CCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCCC
SPTDELATLEAKLQEFLDNGSQLGWLIDPESRQVHVYRPGQPVQVLEQPVSLSGDPVLPG
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCH
FVMDLTLIWG
HHHHEEEECC
>Mature Secondary Structure
MIALNLQPAVNLTDEVFEQLCRQNPELRLERTAQGELIAMAPAGSESGFRNADLLGQLWQ
CEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
WNRRKNLGLVFDSSAGFALPNGAIRSPDAAWVAKERWQQLTPEQRRRFAPLCPDFVLELK
CCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCCC
SPTDELATLEAKLQEFLDNGSQLGWLIDPESRQVHVYRPGQPVQVLEQPVSLSGDPVLPG
CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCH
FVMDLTLIWG
HHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA