| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is gshB [H]
Identifier: 86608528
GI number: 86608528
Start: 1088232
End: 1089179
Strand: Reverse
Name: gshB [H]
Synonym: CYB_1049
Alternate gene names: 86608528
Gene position: 1089179-1088232 (Counterclockwise)
Preceding gene: 86608530
Following gene: 86608525
Centisome position: 35.75
GC content: 56.12
Gene sequence:
>948_bases ATGCAGGTAGCTTTTATTGTCGATCCATTGCCTCAGTTGCAGGTGGGCCATGACACCAGCATTGCCCTGATGGAAGCTCT GCAGAAACGGGGACACCGCATTTTCTGCCTGGGCCTGGCGGATCTCTACTGGGATCAAGGGGAAACTTGGGGATCCCTTG AGGAAATCCGGTTGGATCTGCAAGCGGATCCCTGGTATGAGGTCAAAGACCGGCAACTGCTGCCCCTGAGCCAAATGCAG GCGGTGTGGATGCGCAAGGATCCGCCGGTAGATGCGGCCTATCTCTATGCCACTTACCTTTTGGATCGTCTCTCTCCCAG CCGCACACTGGTGCTCAATCATCCTGCCGGGATCCGCTCGGCCAACGAAAAGCTCTATGCCCTGCAATTTCAAGAGTGGA TCCCGCGCACCCGCGTCAGCAGCAACAAGCGTCTGCTGCGTCAGTTCGTCGAACAGGAAGGACAGGCGGTGCTCAAGCCC TTGGGTGGCAAAGGTGGGGAAGGGATCCTGAGGGTCAATGCCGGGGATCCAAACCTCAACTCGTTGATTGAAATGAGCAC CCAATTTGGTCGGCTGCCTGTGATGGTGCAGGAGTATTTGCCACAGGCGGCCGCAGGAGATAAACGCATTTTGTTGCTGG AAGGAGAACCTTTGGGCGCCGTCAATCGGATCCCTGGAGAGGGCGATTTTCGGGGCAATGTTGCTGCCGGCGGTCGAGTG GAAAAAACCAAGATTACCGAAAAAGAACGGGCTCTCTGCGGGGCTTTGGCACCGGTGCTCAGGCAGGAGAAGCTGTATTT TGTCGGGATTGATGTTATCGGGGAACGACTAACCGAAGTGAACGTGACCAGCCCAACAATGCTGCGAGAACTCTGTCAGT TGGAAGGAGTTGACCTGGCAGATCAAGTGGCTCAGTGGCTGGAAAAGAAGGTGCCCGTCAAGGGCTGA
Upstream 100 bases:
>100_bases AGGGGGCCTTCTCTTGTGGAAACAGCCTACCGGGGGAGAGCCATCGGCTCCGATTTGTTGCATACTCGGGGCAGCCTTTC GTCAGTGAACCACACCTCCC
Downstream 100 bases:
>100_bases ATGACTACCCACCAGGATGTTTCTGGGATCCGGCGCGTCTGTTGCCTGACGGGGTTCCCGTCTATTTAGGGAGTCTATAG AGATCAAATTATAGCTTGGA
Product: glutathione synthetase
Products: NA
Alternate protein names: GSH synthetase; GSH-S; GSHase; Glutathione synthase [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MQVAFIVDPLPQLQVGHDTSIALMEALQKRGHRIFCLGLADLYWDQGETWGSLEEIRLDLQADPWYEVKDRQLLPLSQMQ AVWMRKDPPVDAAYLYATYLLDRLSPSRTLVLNHPAGIRSANEKLYALQFQEWIPRTRVSSNKRLLRQFVEQEGQAVLKP LGGKGGEGILRVNAGDPNLNSLIEMSTQFGRLPVMVQEYLPQAAAGDKRILLLEGEPLGAVNRIPGEGDFRGNVAAGGRV EKTKITEKERALCGALAPVLRQEKLYFVGIDVIGERLTEVNVTSPTMLRELCQLEGVDLADQVAQWLEKKVPVKG
Sequences:
>Translated_315_residues MQVAFIVDPLPQLQVGHDTSIALMEALQKRGHRIFCLGLADLYWDQGETWGSLEEIRLDLQADPWYEVKDRQLLPLSQMQ AVWMRKDPPVDAAYLYATYLLDRLSPSRTLVLNHPAGIRSANEKLYALQFQEWIPRTRVSSNKRLLRQFVEQEGQAVLKP LGGKGGEGILRVNAGDPNLNSLIEMSTQFGRLPVMVQEYLPQAAAGDKRILLLEGEPLGAVNRIPGEGDFRGNVAAGGRV EKTKITEKERALCGALAPVLRQEKLYFVGIDVIGERLTEVNVTSPTMLRELCQLEGVDLADQVAQWLEKKVPVKG >Mature_315_residues MQVAFIVDPLPQLQVGHDTSIALMEALQKRGHRIFCLGLADLYWDQGETWGSLEEIRLDLQADPWYEVKDRQLLPLSQMQ AVWMRKDPPVDAAYLYATYLLDRLSPSRTLVLNHPAGIRSANEKLYALQFQEWIPRTRVSSNKRLLRQFVEQEGQAVLKP LGGKGGEGILRVNAGDPNLNSLIEMSTQFGRLPVMVQEYLPQAAAGDKRILLLEGEPLGAVNRIPGEGDFRGNVAAGGRV EKTKITEKERALCGALAPVLRQEKLYFVGIDVIGERLTEVNVTSPTMLRELCQLEGVDLADQVAQWLEKKVPVKG
Specific function: Glutathione biosynthesis; second step. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1789316, Length=292, Percent_Identity=39.7260273972603, Blast_Score=240, Evalue=8e-65, Organism=Escherichia coli, GI1787076, Length=246, Percent_Identity=26.4227642276423, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006284 - InterPro: IPR004218 - InterPro: IPR004215 - InterPro: IPR013817 - InterPro: IPR016185 [H]
Pfam domain/function: PF02955 GSH-S_ATP; PF02951 GSH-S_N [H]
EC number: =6.3.2.3 [H]
Molecular weight: Translated: 35191; Mature: 35191
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVAFIVDPLPQLQVGHDTSIALMEALQKRGHRIFCLGLADLYWDQGETWGSLEEIRLDL CEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCHHHEEEEC QADPWYEVKDRQLLPLSQMQAVWMRKDPPVDAAYLYATYLLDRLSPSRTLVLNHPAGIRS CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCC ANEKLYALQFQEWIPRTRVSSNKRLLRQFVEQEGQAVLKPLGGKGGEGILRVNAGDPNLN CCCCEEEEEHHHHCCCHHCCCCHHHHHHHHHHCCCEEHHCCCCCCCCCEEEEECCCCCHH SLIEMSTQFGRLPVMVQEYLPQAAAGDKRILLLEGEPLGAVNRIPGEGDFRGNVAAGGRV HHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE EKTKITEKERALCGALAPVLRQEKLYFVGIDVIGERLTEVNVTSPTMLRELCQLEGVDLA EHHHCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH DQVAQWLEKKVPVKG HHHHHHHHHCCCCCC >Mature Secondary Structure MQVAFIVDPLPQLQVGHDTSIALMEALQKRGHRIFCLGLADLYWDQGETWGSLEEIRLDL CEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCHHHEEEEC QADPWYEVKDRQLLPLSQMQAVWMRKDPPVDAAYLYATYLLDRLSPSRTLVLNHPAGIRS CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCC ANEKLYALQFQEWIPRTRVSSNKRLLRQFVEQEGQAVLKPLGGKGGEGILRVNAGDPNLN CCCCEEEEEHHHHCCCHHCCCCHHHHHHHHHHCCCEEHHCCCCCCCCCEEEEECCCCCHH SLIEMSTQFGRLPVMVQEYLPQAAAGDKRILLLEGEPLGAVNRIPGEGDFRGNVAAGGRV HHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE EKTKITEKERALCGALAPVLRQEKLYFVGIDVIGERLTEVNVTSPTMLRELCQLEGVDLA EHHHCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH DQVAQWLEKKVPVKG HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12240834 [H]