| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608526
Identifier: 86608526
GI number: 86608526
Start: 1086266
End: 1086748
Strand: Direct
Name: 86608526
Synonym: CYB_1047
Alternate gene names: NA
Gene position: 1086266-1086748 (Clockwise)
Preceding gene: 86608524
Following gene: 86608527
Centisome position: 35.65
GC content: 50.72
Gene sequence:
>483_bases ATGCTGGAGATGATCTTTAACGGGGCTAACTGGTTTGCTCTGCCCTTTTGGGCCTTGATGATTCTGCTGCCGGGTTGGAA GGTAACCCGCAAAGTGATGGAATCGCTTTTGCCCATCGCTCTTTTGGCGGCGGTTTATTTGTATCTTTTGGTCACCGGGT TTAATGCCGATGTTCTCAAGGAATTTTCCAACCCTCAACTGTCTCTGACCAGCTTAACTGGCCTATTCAGTCAACCCTCT GTTATGGCGACGGGATGGGTCCACTACATCGTCATGGATTTGTTTGTGGGCCGCTGGATCTTCTTGGAAGGGTGGGATAA GCGAGTATGGACAACCCATTCCCTGATTTTGTGCTTGTTTGCTGGGCCTGTGGGTCTGCTCTCCCATTTGCTTACGGTGG CGATTGTACAAGCAACTCGCCAGAACCGGCCCAGTGTTGCTCAACCTGAAAAAGGCTCAGAAGTGCCGCAAGAATCCATC TAG
Upstream 100 bases:
>100_bases CAAGTCAGGAATAGCTCCTATCCATTCCTACCCACCACTGCAGGGATCCCCAGGGGGCATTGGGCCGATAATAGACAGGT AGCGTTGGGGGCTGCCAAGC
Downstream 100 bases:
>100_bases CCCCTGCTTGGCTTTATAGCTCTTTCCGATGCACAGGGTGCAAAATGAGCAGCGTGGGATCATCCTCGACCTCAACGTTG CTGCCACGCAGCTCCCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLEMIFNGANWFALPFWALMILLPGWKVTRKVMESLLPIALLAAVYLYLLVTGFNADVLKEFSNPQLSLTSLTGLFSQPS VMATGWVHYIVMDLFVGRWIFLEGWDKRVWTTHSLILCLFAGPVGLLSHLLTVAIVQATRQNRPSVAQPEKGSEVPQESI
Sequences:
>Translated_160_residues MLEMIFNGANWFALPFWALMILLPGWKVTRKVMESLLPIALLAAVYLYLLVTGFNADVLKEFSNPQLSLTSLTGLFSQPS VMATGWVHYIVMDLFVGRWIFLEGWDKRVWTTHSLILCLFAGPVGLLSHLLTVAIVQATRQNRPSVAQPEKGSEVPQESI >Mature_160_residues MLEMIFNGANWFALPFWALMILLPGWKVTRKVMESLLPIALLAAVYLYLLVTGFNADVLKEFSNPQLSLTSLTGLFSQPS VMATGWVHYIVMDLFVGRWIFLEGWDKRVWTTHSLILCLFAGPVGLLSHLLTVAIVQATRQNRPSVAQPEKGSEVPQESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17947; Mature: 17947
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEMIFNGANWFALPFWALMILLPGWKVTRKVMESLLPIALLAAVYLYLLVTGFNADVLK CCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EFSNPQLSLTSLTGLFSQPSVMATGWVHYIVMDLFVGRWIFLEGWDKRVWTTHSLILCLF HCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH AGPVGLLSHLLTVAIVQATRQNRPSVAQPEKGSEVPQESI HCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLEMIFNGANWFALPFWALMILLPGWKVTRKVMESLLPIALLAAVYLYLLVTGFNADVLK CCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EFSNPQLSLTSLTGLFSQPSVMATGWVHYIVMDLFVGRWIFLEGWDKRVWTTHSLILCLF HCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH AGPVGLLSHLLTVAIVQATRQNRPSVAQPEKGSEVPQESI HCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA