| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608513
Identifier: 86608513
GI number: 86608513
Start: 1076533
End: 1077627
Strand: Reverse
Name: 86608513
Synonym: CYB_1034
Alternate gene names: NA
Gene position: 1077627-1076533 (Counterclockwise)
Preceding gene: 86608515
Following gene: 86608506
Centisome position: 35.37
GC content: 53.52
Gene sequence:
>1095_bases ATGCTGATAAAGGGGGATTTTGGGACAGGCAAGTCCCATCTTCTACTAACCCTGCAGGAGCGAGCAAGGAAGAATAATTT TGCCACCTCCCTAGTTGTCGTCTCCAAAGAGTTGCCCCTCGGTAACCCCAATCGCCTGATTCCCCGCCTCCTTGCCCAGG TCGAGCTCCCTGACATGGTTGAGCGTGGGATCCAAGGCATGGCAGCCCGGCTACAGGACTCCTCGCCTTCTTTCTCGCCT TCTTTCCAGAAGTTCCAGCTTTGGGTTAACCAGTGGCAGTTTGGGTCAGGCTGGTGGCCGGCCACCTTGGCTCTGTACCA AAGGTTAGGAGGCGATGACGAGAAGCTAGACGCCATTGTCCGCTTTTGGGCTGGTGAGCCCACTCTGAAGTCCTCAGAGG TAAGGCGAAGCCTACGGGATCACGGCTTGGCAGGTGCTTATCCCATTGGCAAGCTACCCCCTGCAGAAAGCCTACACTGG CAGCGCCTGGCCTTCTGTGCCCAGCTATGTCGGGCCATAGGGTTTGGGGGCTTGGTGGTTTTGGTGGATGAGATTGAGCT TATTGCCCAGTACAGTCTTCTTCAGCGGGTCAAGTCGTACCGCGTTCTTGGGCACTTGTTTGGTACAACAACCCTGCCTG AAGAAATAAAGAAAGCTCCGCTGGTTTTCGTAGGAGCAGTAACCCGCGATTTCGAGAGGGTCATTCTACAAGAAAAAGGA GATTGGGAGAAAGCACCTAAGATAGCTCTCCAGAAGCATATGTCTGAGGAAGTTGTAAAGGCCGGCATGGAGGCTATTAG CCAAGCTACCCCTCTCTGTTCCTGCTTAGAAGCCCGCGAGGACATTCAATCCATGTGGCATAGGGTAGCGGATCTCTACC AGAAAGCTTATCCCGATTGGGTACGCCCATCGCTGCCACAGCTTCCTGAGCTCTACAGCACAACCACTGTGCGGTCAATT ATTCGCCGCTGGATTACGGAGTGGGATGTGCGTCGGTATTACAGCCCCGATACAGAAATTGTGATTGTAGAAGATGAGGC GATCAAGTCTACCCCAACTGAGGAGCTTCCAGAGTTGGAAGAGGACGAAGAATAA
Upstream 100 bases:
>100_bases TCCTAACCGGTTCGCAGTTGCAGAACTTGGCTCTTGGCAGTCTCAGATTGAGGAGGGTTTTCAAGAGCTGTGCAAGGGTG CTAGTTCAGGCCCTGCAGGA
Downstream 100 bases:
>100_bases GCCCAGTCAATCCCTAACTAGCTTTGAGAGGCCTCAGCGCTGGAAAGGGTTTTGGAAAGGATTCGGGCTGGAGCTTTGCC CCTTGTTGCGGTACTTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MLIKGDFGTGKSHLLLTLQERARKNNFATSLVVVSKELPLGNPNRLIPRLLAQVELPDMVERGIQGMAARLQDSSPSFSP SFQKFQLWVNQWQFGSGWWPATLALYQRLGGDDEKLDAIVRFWAGEPTLKSSEVRRSLRDHGLAGAYPIGKLPPAESLHW QRLAFCAQLCRAIGFGGLVVLVDEIELIAQYSLLQRVKSYRVLGHLFGTTTLPEEIKKAPLVFVGAVTRDFERVILQEKG DWEKAPKIALQKHMSEEVVKAGMEAISQATPLCSCLEAREDIQSMWHRVADLYQKAYPDWVRPSLPQLPELYSTTTVRSI IRRWITEWDVRRYYSPDTEIVIVEDEAIKSTPTEELPELEEDEE
Sequences:
>Translated_364_residues MLIKGDFGTGKSHLLLTLQERARKNNFATSLVVVSKELPLGNPNRLIPRLLAQVELPDMVERGIQGMAARLQDSSPSFSP SFQKFQLWVNQWQFGSGWWPATLALYQRLGGDDEKLDAIVRFWAGEPTLKSSEVRRSLRDHGLAGAYPIGKLPPAESLHW QRLAFCAQLCRAIGFGGLVVLVDEIELIAQYSLLQRVKSYRVLGHLFGTTTLPEEIKKAPLVFVGAVTRDFERVILQEKG DWEKAPKIALQKHMSEEVVKAGMEAISQATPLCSCLEAREDIQSMWHRVADLYQKAYPDWVRPSLPQLPELYSTTTVRSI IRRWITEWDVRRYYSPDTEIVIVEDEAIKSTPTEELPELEEDEE >Mature_364_residues MLIKGDFGTGKSHLLLTLQERARKNNFATSLVVVSKELPLGNPNRLIPRLLAQVELPDMVERGIQGMAARLQDSSPSFSP SFQKFQLWVNQWQFGSGWWPATLALYQRLGGDDEKLDAIVRFWAGEPTLKSSEVRRSLRDHGLAGAYPIGKLPPAESLHW QRLAFCAQLCRAIGFGGLVVLVDEIELIAQYSLLQRVKSYRVLGHLFGTTTLPEEIKKAPLVFVGAVTRDFERVILQEKG DWEKAPKIALQKHMSEEVVKAGMEAISQATPLCSCLEAREDIQSMWHRVADLYQKAYPDWVRPSLPQLPELYSTTTVRSI IRRWITEWDVRRYYSPDTEIVIVEDEAIKSTPTEELPELEEDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41356; Mature: 41356
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKGDFGTGKSHLLLTLQERARKNNFATSLVVVSKELPLGNPNRLIPRLLAQVELPDMV CEECCCCCCCCCCEEEEEHHHHCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHCCCHHHH ERGIQGMAARLQDSSPSFSPSFQKFQLWVNQWQFGSGWWPATLALYQRLGGDDEKLDAIV HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHH RFWAGEPTLKSSEVRRSLRDHGLAGAYPIGKLPPAESLHWQRLAFCAQLCRAIGFGGLVV HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH LVDEIELIAQYSLLQRVKSYRVLGHLFGTTTLPEEIKKAPLVFVGAVTRDFERVILQEKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEHHHHHHHHHHHHHCCC DWEKAPKIALQKHMSEEVVKAGMEAISQATPLCSCLEAREDIQSMWHRVADLYQKAYPDW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VRPSLPQLPELYSTTTVRSIIRRWITEWDVRRYYSPDTEIVIVEDEAIKSTPTEELPELE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCHHHCCCCC EDEE CCCC >Mature Secondary Structure MLIKGDFGTGKSHLLLTLQERARKNNFATSLVVVSKELPLGNPNRLIPRLLAQVELPDMV CEECCCCCCCCCCEEEEEHHHHCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHCCCHHHH ERGIQGMAARLQDSSPSFSPSFQKFQLWVNQWQFGSGWWPATLALYQRLGGDDEKLDAIV HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHH RFWAGEPTLKSSEVRRSLRDHGLAGAYPIGKLPPAESLHWQRLAFCAQLCRAIGFGGLVV HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH LVDEIELIAQYSLLQRVKSYRVLGHLFGTTTLPEEIKKAPLVFVGAVTRDFERVILQEKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEHHHHHHHHHHHHHCCC DWEKAPKIALQKHMSEEVVKAGMEAISQATPLCSCLEAREDIQSMWHRVADLYQKAYPDW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VRPSLPQLPELYSTTTVRSIIRRWITEWDVRRYYSPDTEIVIVEDEAIKSTPTEELPELE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCHHHCCCCC EDEE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA