| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is purE [H]
Identifier: 86608510
GI number: 86608510
Start: 1074130
End: 1074669
Strand: Direct
Name: purE [H]
Synonym: CYB_1031
Alternate gene names: 86608510
Gene position: 1074130-1074669 (Clockwise)
Preceding gene: 86608509
Following gene: 86608511
Centisome position: 35.26
GC content: 59.63
Gene sequence:
>540_bases ATGGAACTCTCCCCCCTCGTTGCCATCGTAATGGGTAGCGATTCCGATTTGCCCACCCTTGCACCTGCCGCCCAGGTGTG TGAGGAGTTTGGGATCCCTTACCAATTGCAGATCCTCAGCGCCCATCGCACTCCCGAGGCGATGGTAGAGTTTGCCCGCC GCGCCCATACCCAAGGGATCCGCGTCATCATTGCCGGGGCAGGGGGAGCAGCCCATTTGCCGGGGATGGTGGCGTCCCTC ACCCCTCTGCCGGTGATCGGGGTGCCGGTGCTCAGCCCATCCCTGCAGGGGATCGACTCCTTATACTCGATTGTGCAAAT GCCCAAAGGGATCCCGGTGGCCACGGTGGCCATTGGCAACGGCTACAACGCGGGTCTGTTGGCGGTGCAGATCCTAGCCA GTGGGGATCCCGATCTGCTCCGGCGGGTGATCGCCTATCGGGAAAGCCTAAAACAGGCGGTGCAGGAGAAAAACGACCAG TTGCAAACCCAAGGGTGGAAAGCCTACCTCGACTCTATAAAGCATAAGAGCATAATTTAA
Upstream 100 bases:
>100_bases TGCTGGCAGAGCCCCCACCCATCTCGACGGGGTTGGGCTATGCGATGATGGATCGGCTACGCCGGGCCAGCAGCCTTTCG CGTTAGCGTCGCTTAGCGAT
Downstream 100 bases:
>100_bases GGAGCGTTGATCTATCTTGCCGCTTGCAAAGGGCCAGATAGGGCCGAGTTTTGGGAGTTGCCATCGGTGAAGCATCAATC GGGTCGCCCTTCTTCCGGCC
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MELSPLVAIVMGSDSDLPTLAPAAQVCEEFGIPYQLQILSAHRTPEAMVEFARRAHTQGIRVIIAGAGGAAHLPGMVASL TPLPVIGVPVLSPSLQGIDSLYSIVQMPKGIPVATVAIGNGYNAGLLAVQILASGDPDLLRRVIAYRESLKQAVQEKNDQ LQTQGWKAYLDSIKHKSII
Sequences:
>Translated_179_residues MELSPLVAIVMGSDSDLPTLAPAAQVCEEFGIPYQLQILSAHRTPEAMVEFARRAHTQGIRVIIAGAGGAAHLPGMVASL TPLPVIGVPVLSPSLQGIDSLYSIVQMPKGIPVATVAIGNGYNAGLLAVQILASGDPDLLRRVIAYRESLKQAVQEKNDQ LQTQGWKAYLDSIKHKSII >Mature_179_residues MELSPLVAIVMGSDSDLPTLAPAAQVCEEFGIPYQLQILSAHRTPEAMVEFARRAHTQGIRVIIAGAGGAAHLPGMVASL TPLPVIGVPVLSPSLQGIDSLYSIVQMPKGIPVATVAIGNGYNAGLLAVQILASGDPDLLRRVIAYRESLKQAVQEKNDQ LQTQGWKAYLDSIKHKSII
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Homo sapiens, GI119220559, Length=111, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI119220557, Length=111, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI5453539, Length=111, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1786734, Length=155, Percent_Identity=52.258064516129, Blast_Score=135, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324702, Length=170, Percent_Identity=53.5294117647059, Blast_Score=187, Evalue=7e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 18984; Mature: 18984
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSPLVAIVMGSDSDLPTLAPAAQVCEEFGIPYQLQILSAHRTPEAMVEFARRAHTQGI CCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCE RVIIAGAGGAAHLPGMVASLTPLPVIGVPVLSPSLQGIDSLYSIVQMPKGIPVATVAIGN EEEEECCCCCHHCCCHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC GYNAGLLAVQILASGDPDLLRRVIAYRESLKQAVQEKNDQLQTQGWKAYLDSIKHKSII CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELSPLVAIVMGSDSDLPTLAPAAQVCEEFGIPYQLQILSAHRTPEAMVEFARRAHTQGI CCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCE RVIIAGAGGAAHLPGMVASLTPLPVIGVPVLSPSLQGIDSLYSIVQMPKGIPVATVAIGN EEEEECCCCCHHCCCHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC GYNAGLLAVQILASGDPDLLRRVIAYRESLKQAVQEKNDQLQTQGWKAYLDSIKHKSII CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]