| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is chlL [H]
Identifier: 86608495
GI number: 86608495
Start: 1055032
End: 1055883
Strand: Reverse
Name: chlL [H]
Synonym: CYB_1016
Alternate gene names: 86608495
Gene position: 1055883-1055032 (Counterclockwise)
Preceding gene: 86608496
Following gene: 86608494
Centisome position: 34.66
GC content: 59.27
Gene sequence:
>852_bases ATGGAGGAACGCGCTGTGAAGTTGGCAGTTTACGGAAAAGGTGGGATCGGCAAATCCACCACCAGTTGCAACATCTCGGT GGCCTTGGCCAGGCGGGGCAAAAAGGTCTTGCAGATTGGCTGTGATCCCAAGCACGACAGCACCTTCACCCTGACCGGCT TTCTCATCCCCACCATCATCGACACTCTGGAAGCCAAGGGCTATCACCACGAAGACATCTACCCAGAAGATGTGATCTAC CGCGGCTACGGCGGCGTGGACTGTGTGGAAGCGGGTGGGCCCCCGGCAGGGGCCGGCTGTGGCGGCTATGTGGTGGGGGA AACCGTCAAACTCCTGAAGGAGCTGAACGCCTTCGATGAGTACGATGTCATCCTCTTCGATGTGCTGGGGGATGTGGTGT GCGGCGGTTTTGCGGCTCCCCTCAACTACGCCGACTACTGCCTGATCGTAACCGACAACGGCTTTGATGCCCTGTTTGCC GCCAATCGGATTGCTGCCTCGGTGCGAGAAAAGGCCAAAACCCGCAAGCTGCGGTTGGCCGGGCTGATCGGCAATCGCAC CAGTAAGCGGGATCTGATTGACAAATACGTCTCGGCAGTTCCCATGCCCGTTATCGAGGTGCTTCCCCTCATCGAAGATA TTCGCGTCTCGCGGGTCAAGGGCAAAACCCTCTTCGAGATGGCGGAAACCGATCCCAGCCTGGAGCCCGTCTGCCAGTAC TACCTGAACATCGCCGATGAGCTGCTGGCCCGCCCGGAAGGGATCGTGCCCCAACCTGCCGAGGATCGGGAGCTGTTTGC TTTGCTCTCCGACTTTTACAACACCCCGGCCCGTCAACTGGCCCTGGTGTGA
Upstream 100 bases:
>100_bases AAGATCTGGGAACTTCTAGCTTTTTGAGGGATCCACCTTTATCCTTCGCAACAGTTCTCAGGGGGCGGATCGGCTGCCGA TAATGTCCCTTGTCTGCCCC
Downstream 100 bases:
>100_bases CGGATCCCCTGCCAGCGGGGGCAGTGTGTCCAAAAATGAAGCCACTGTTTCGGAAGACTGTCGCAAACCTTATCAATTTG TTGTCCGATCCGCTTTCCCC
Product: protochlorophyllide reductase iron-sulfur ATP-binding protein
Products: NA
Alternate protein names: DPOR subunit L; LI-POR subunit L [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MEERAVKLAVYGKGGIGKSTTSCNISVALARRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLEAKGYHHEDIYPEDVIY RGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFA ANRIAASVREKAKTRKLRLAGLIGNRTSKRDLIDKYVSAVPMPVIEVLPLIEDIRVSRVKGKTLFEMAETDPSLEPVCQY YLNIADELLARPEGIVPQPAEDRELFALLSDFYNTPARQLALV
Sequences:
>Translated_283_residues MEERAVKLAVYGKGGIGKSTTSCNISVALARRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLEAKGYHHEDIYPEDVIY RGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFA ANRIAASVREKAKTRKLRLAGLIGNRTSKRDLIDKYVSAVPMPVIEVLPLIEDIRVSRVKGKTLFEMAETDPSLEPVCQY YLNIADELLARPEGIVPQPAEDRELFALLSDFYNTPARQLALV >Mature_283_residues MEERAVKLAVYGKGGIGKSTTSCNISVALARRGKKVLQIGCDPKHDSTFTLTGFLIPTIIDTLEAKGYHHEDIYPEDVIY RGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDEYDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFA ANRIAASVREKAKTRKLRLAGLIGNRTSKRDLIDKYVSAVPMPVIEVLPLIEDIRVSRVKGKTLFEMAETDPSLEPVCQY YLNIADELLARPEGIVPQPAEDRELFALLSDFYNTPARQLALV
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent [H]
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000392 - InterPro: IPR005971 [H]
Pfam domain/function: PF00142 Fer4_NifH [H]
EC number: 1.18.-.-
Molecular weight: Translated: 30768; Mature: 30768
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEERAVKLAVYGKGGIGKSTTSCNISVALARRGKKVLQIGCDPKHDSTFTLTGFLIPTII CCCCEEEEEEEECCCCCCCCCCCEEEEEEHHCCCEEEEECCCCCCCCEEEEHHHHHHHHH DTLEAKGYHHEDIYPEDVIYRGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDE HHHHCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC YDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKAKTRKLRLA CCHHHHHHHHHHHHCCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEE GLIGNRTSKRDLIDKYVSAVPMPVIEVLPLIEDIRVSRVKGKTLFEMAETDPSLEPVCQY HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH YLNIADELLARPEGIVPQPAEDRELFALLSDFYNTPARQLALV HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEECC >Mature Secondary Structure MEERAVKLAVYGKGGIGKSTTSCNISVALARRGKKVLQIGCDPKHDSTFTLTGFLIPTII CCCCEEEEEEEECCCCCCCCCCCEEEEEEHHCCCEEEEECCCCCCCCEEEEHHHHHHHHH DTLEAKGYHHEDIYPEDVIYRGYGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFDE HHHHCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC YDVILFDVLGDVVCGGFAAPLNYADYCLIVTDNGFDALFAANRIAASVREKAKTRKLRLA CCHHHHHHHHHHHHCCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEE GLIGNRTSKRDLIDKYVSAVPMPVIEVLPLIEDIRVSRVKGKTLFEMAETDPSLEPVCQY HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH YLNIADELLARPEGIVPQPAEDRELFALLSDFYNTPARQLALV HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA