Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608451

Identifier: 86608451

GI number: 86608451

Start: 1008126

End: 1008764

Strand: Direct

Name: 86608451

Synonym: CYB_0972

Alternate gene names: NA

Gene position: 1008126-1008764 (Clockwise)

Preceding gene: 86608450

Following gene: 86608453

Centisome position: 33.09

GC content: 61.35

Gene sequence:

>639_bases
ATGCCAAAACTGGGGTGGAGTTGTAGGGGATCGGTTCTGCGGGGCACGATTAGCCTTGTGGCTATTGTGCTGGTGGGGCT
GCTGGCCGGCTGCGGCCCTAGACCGCCAAAGCCGATTGTGCAGCAGGCCCTCGCCTATCAGATCGCTCATTTGTCCGGGC
CGGTGGGATCCTTAGTGGGCAGCGACCGGTTGTCGGCACATCTGGAATTGCAGGATGTGAAAATCCGCCAGGATCGCCGT
GAACCTTTGCTGTTAGTCTCAGGAGAAACCCTGGAAGGCCATCACCTCAGCGGCACCTACACCCTAATCGTGCATCCGCC
GGGATCCCGCCGCCCCTATCGCCGCAAAGGGGATCCCTTCCAGATCACCCTGGCCCACCAAAAGGCACAAACTGTTGCTA
CACAACGCTCGCCCGACCGCGTCAAAACCGTGCCCGAACGGTGGCTGCTGGCCTACAGCTCACCGGATTCCAAGACTTGG
GAGGTCATCGACTTTCTGCCTCAGCCCGCACCGGCACCGGAGTTGCCTCCTGCTGGGCCAGAACCTACACTGCCGGCAAC
TGCACCTGCTGCCGCCGACGTTGGCAGGACGGAGTCCGATGGAGCTCCCAGCCCTACCAATACTTCTACTCCCACCTGA

Upstream 100 bases:

>100_bases
GTACCGGCCTTGTGGCTCTCACCCGCGAGTCCGGCGTGAATACGGAATACCTGAAGCAACACCCCACCTTAGTTACCGTC
TGATGGCCTCAGGGGAAGCG

Downstream 100 bases:

>100_bases
AGCAGAGTTATGGGGATGTCCCAGCTCACCGCAGCAGAGCTGCCCCCCAGCCAAATAGCCCATCCACCAACAGGGTATTC
AGCACTGCTCCCGCAAATGC

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPKLGWSCRGSVLRGTISLVAIVLVGLLAGCGPRPPKPIVQQALAYQIAHLSGPVGSLVGSDRLSAHLELQDVKIRQDRR
EPLLLVSGETLEGHHLSGTYTLIVHPPGSRRPYRRKGDPFQITLAHQKAQTVATQRSPDRVKTVPERWLLAYSSPDSKTW
EVIDFLPQPAPAPELPPAGPEPTLPATAPAAADVGRTESDGAPSPTNTSTPT

Sequences:

>Translated_212_residues
MPKLGWSCRGSVLRGTISLVAIVLVGLLAGCGPRPPKPIVQQALAYQIAHLSGPVGSLVGSDRLSAHLELQDVKIRQDRR
EPLLLVSGETLEGHHLSGTYTLIVHPPGSRRPYRRKGDPFQITLAHQKAQTVATQRSPDRVKTVPERWLLAYSSPDSKTW
EVIDFLPQPAPAPELPPAGPEPTLPATAPAAADVGRTESDGAPSPTNTSTPT
>Mature_211_residues
PKLGWSCRGSVLRGTISLVAIVLVGLLAGCGPRPPKPIVQQALAYQIAHLSGPVGSLVGSDRLSAHLELQDVKIRQDRRE
PLLLVSGETLEGHHLSGTYTLIVHPPGSRRPYRRKGDPFQITLAHQKAQTVATQRSPDRVKTVPERWLLAYSSPDSKTWE
VIDFLPQPAPAPELPPAGPEPTLPATAPAAADVGRTESDGAPSPTNTSTPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22666; Mature: 22535

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLGWSCRGSVLRGTISLVAIVLVGLLAGCGPRPPKPIVQQALAYQIAHLSGPVGSLVG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHC
SDRLSAHLELQDVKIRQDRREPLLLVSGETLEGHHLSGTYTLIVHPPGSRRPYRRKGDPF
CCCCEEEEEEEHHHCCCCCCCCEEEEECCCCCCEECCCEEEEEEECCCCCCCCCCCCCCE
QITLAHQKAQTVATQRSPDRVKTVPERWLLAYSSPDSKTWEVIDFLPQPAPAPELPPAGP
EEEEECHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCHHEECCCCCCCCCCCCCCCC
EPTLPATAPAAADVGRTESDGAPSPTNTSTPT
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKLGWSCRGSVLRGTISLVAIVLVGLLAGCGPRPPKPIVQQALAYQIAHLSGPVGSLVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHC
SDRLSAHLELQDVKIRQDRREPLLLVSGETLEGHHLSGTYTLIVHPPGSRRPYRRKGDPF
CCCCEEEEEEEHHHCCCCCCCCEEEEECCCCCCEECCCEEEEEEECCCCCCCCCCCCCCE
QITLAHQKAQTVATQRSPDRVKTVPERWLLAYSSPDSKTWEVIDFLPQPAPAPELPPAGP
EEEEECHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCHHEECCCCCCCCCCCCCCCC
EPTLPATAPAAADVGRTESDGAPSPTNTSTPT
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA