Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608414
Identifier: 86608414
GI number: 86608414
Start: 972908
End: 973756
Strand: Reverse
Name: 86608414
Synonym: CYB_0934
Alternate gene names: NA
Gene position: 973756-972908 (Counterclockwise)
Preceding gene: 86608418
Following gene: 86608412
Centisome position: 31.96
GC content: 62.19
Gene sequence:
>849_bases ATGATAAAGGCTGTCGAGAATTACCCACTTCAGGATCCCTTAGAGCAAGCCCTATGGGACTGGCACCGAGGAGAGGCCAA GGGATCCCTGCTCTTGCATGCCTACGGCCTGGAGGGGATCCCGTTGGCGGAAGAGCCCCAGGTGGTCTCCCCAGAGGTGT TCTTCACCCAGGAGCTGCCGGAGGTGGAGGCCATGGCTTTGGATCTATGCCGCGGTCGGGTGCTGGACATCGGCGCCGGC ACGGGCCGCCACAGCCTGCTGCTGCAGGAGGAAGGATTGGCCGTGGCTGCCTTGGATCGCTCCCCGGTGGCGTTGCAGAT CATGGCAGAGCGGGGGGTGCGCTGCCGCATTGCCGCCGATCTTTTCCACTGGGCGGGGCCAGGAGAGCCCTTCGATACCC TACTCCTGCTGATGAACGGCGTCGGCTTGGCGGGATCCCTGTCGGGCTTGGAGCGTTTTTTGCGCCTGGCTCGCCACTGG GTTCAGCCCACTGGCCAGTTGCTCCTGGATTCCACCGATTTGAGCGATGCCAGCGACCTCGCAGATCTGCGGAATCTGCC GGCAGAAGAGGGAGGGCGTTTAGAAAACTTGGAAGATCCCTCTGGCAAGCTGGCCGCTCCTGCCCACCTCGAAGCAGGTG GCTCAGAAGATTGGCAGGAAGGGAGCGAGGCAAAAGCCAAGGTAGTGAACTTTGTAGCCGAGTACAACGGCCAGCGGGGG GATCCCTTTCCCTGGCTATTTGTAGATCCGGAAACCCTGCTGCAGTGTGCCCACGCCAACGGCTGGCAGGGGCAGATTGT CTATCAAGAGCCGGAGGGGGCTTTTCTGGCACGCCTCACCCCCTTCTGA
Upstream 100 bases:
>100_bases TGTTGCCCAAACCACCGCTGCAATCAGCAAAAGGACGATAGCGGCAGCGTCAAGAAATGCCACGATGGCCATCGGGTCAA TGGTTTAGCTTTCCCCTTCC
Downstream 100 bases:
>100_bases AGGACTCGCTAGTGGGAAAGGATCTGGGATAAAAACAGGCGGGAGCGCTCTTCTTTCGGATTGCTGAAAAACTCTTGGGG GGTGTTTTCCTCCACGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type; SAM-Dependent Methyltransferase; Methyltransferase Protein
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MIKAVENYPLQDPLEQALWDWHRGEAKGSLLLHAYGLEGIPLAEEPQVVSPEVFFTQELPEVEAMALDLCRGRVLDIGAG TGRHSLLLQEEGLAVAALDRSPVALQIMAERGVRCRIAADLFHWAGPGEPFDTLLLLMNGVGLAGSLSGLERFLRLARHW VQPTGQLLLDSTDLSDASDLADLRNLPAEEGGRLENLEDPSGKLAAPAHLEAGGSEDWQEGSEAKAKVVNFVAEYNGQRG DPFPWLFVDPETLLQCAHANGWQGQIVYQEPEGAFLARLTPF
Sequences:
>Translated_282_residues MIKAVENYPLQDPLEQALWDWHRGEAKGSLLLHAYGLEGIPLAEEPQVVSPEVFFTQELPEVEAMALDLCRGRVLDIGAG TGRHSLLLQEEGLAVAALDRSPVALQIMAERGVRCRIAADLFHWAGPGEPFDTLLLLMNGVGLAGSLSGLERFLRLARHW VQPTGQLLLDSTDLSDASDLADLRNLPAEEGGRLENLEDPSGKLAAPAHLEAGGSEDWQEGSEAKAKVVNFVAEYNGQRG DPFPWLFVDPETLLQCAHANGWQGQIVYQEPEGAFLARLTPF >Mature_282_residues MIKAVENYPLQDPLEQALWDWHRGEAKGSLLLHAYGLEGIPLAEEPQVVSPEVFFTQELPEVEAMALDLCRGRVLDIGAG TGRHSLLLQEEGLAVAALDRSPVALQIMAERGVRCRIAADLFHWAGPGEPFDTLLLLMNGVGLAGSLSGLERFLRLARHW VQPTGQLLLDSTDLSDASDLADLRNLPAEEGGRLENLEDPSGKLAAPAHLEAGGSEDWQEGSEAKAKVVNFVAEYNGQRG DPFPWLFVDPETLLQCAHANGWQGQIVYQEPEGAFLARLTPF
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30761; Mature: 30761
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKAVENYPLQDPLEQALWDWHRGEAKGSLLLHAYGLEGIPLAEEPQVVSPEVFFTQELP CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCC EVEAMALDLCRGRVLDIGAGTGRHSLLLQEEGLAVAALDRSPVALQIMAERGVRCRIAAD HHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCEEEEEHH LFHWAGPGEPFDTLLLLMNGVGLAGSLSGLERFLRLARHWVQPTGQLLLDSTDLSDASDL HHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHH ADLRNLPAEEGGRLENLEDPSGKLAAPAHLEAGGSEDWQEGSEAKAKVVNFVAEYNGQRG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCC DPFPWLFVDPETLLQCAHANGWQGQIVYQEPEGAFLARLTPF CCCCEEEECHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCC >Mature Secondary Structure MIKAVENYPLQDPLEQALWDWHRGEAKGSLLLHAYGLEGIPLAEEPQVVSPEVFFTQELP CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCC EVEAMALDLCRGRVLDIGAGTGRHSLLLQEEGLAVAALDRSPVALQIMAERGVRCRIAAD HHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCEEEEEHH LFHWAGPGEPFDTLLLLMNGVGLAGSLSGLERFLRLARHWVQPTGQLLLDSTDLSDASDL HHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHH ADLRNLPAEEGGRLENLEDPSGKLAAPAHLEAGGSEDWQEGSEAKAKVVNFVAEYNGQRG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCC DPFPWLFVDPETLLQCAHANGWQGQIVYQEPEGAFLARLTPF CCCCEEEECHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA