| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608363
Identifier: 86608363
GI number: 86608363
Start: 910559
End: 911224
Strand: Reverse
Name: 86608363
Synonym: CYB_0883
Alternate gene names: NA
Gene position: 911224-910559 (Counterclockwise)
Preceding gene: 86608365
Following gene: 86608362
Centisome position: 29.91
GC content: 56.91
Gene sequence:
>666_bases ATGTCACTTGTTTCCATCACATCGGCAACAGAGGCTCAGGAATGGCGTGAGCTTTGCCAGTGGGCCGAGGAGCACTACCG CTGTCGCACCTTTCCCAAAGACGTGCGCATTCCCACTCGTCCGGGATTGGTGTACATCACCCAAGAGGGAGTGGTGCGCC TGGTCAGCCAAACTCCAGAGCGGCGGGAGGTCTTTGTTGGGTTCATCACGGCTGGATTTCCTTTTGAGCTGAGCAACCCA GAGCGCTTTGAGTTGAAAGCCTGCACCCACGCCGATCGCACCACGGTGATGTGGTTTTACTGGCAGGATCTAGAGCAGTG GCCCTATCTGCACCAGAAGATTCAGGAAAACTTCCGCCAGCAACTGCAACGGAAGCTGCTGTGGTTGGGAAATCTGGGCC AACGGCGCGCCATCGATCGCCTCAAGGGCTTCTTGAGCCTGTTGATCGAAGAGTATGGACAGCCCTGTGAACAAGGGATG TATCTCCCCTGGCCCCTTACCCATGCCCAGATTGGGGATGCCATTGGGGCCACCCGCGTGACGGTGACTCGTCTTCTGGG ATCCCTGCGTTCGAAAGGGTTTGTGCAGGTGCTGGATCAAAACTTAATTTGCATTCCCAACGGGGTAAAGCTCCAGCCCA CTCCGAAGAAGGCGGCCAGCGCCTAA
Upstream 100 bases:
>100_bases CGCCGGCGCGAACGCGGAAGCGTTGCATAGCCTACAGCCGGGTAAAGCTGGAAAGTCTGTAAAACCCATCAGGTCGCTCG AGCGACAGGAAGTTGATCTC
Downstream 100 bases:
>100_bases CCCTGCTGTCTAGATGTTATCCAGAGTGTTATGCCTACAGCAGTCGGGAACTGCACTGCTGACGCGATGGGCCTGCAGCT CCACTACCGTACTTGGGGAA
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family Protein; Transcriptional Regulator Crp/Fnr Family; Crp Family Transcriptional Regulatory Protein; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator CRP Family Protein; Two-Component Response Regulator; CRP Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSLVSITSATEAQEWRELCQWAEEHYRCRTFPKDVRIPTRPGLVYITQEGVVRLVSQTPERREVFVGFITAGFPFELSNP ERFELKACTHADRTTVMWFYWQDLEQWPYLHQKIQENFRQQLQRKLLWLGNLGQRRAIDRLKGFLSLLIEEYGQPCEQGM YLPWPLTHAQIGDAIGATRVTVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA
Sequences:
>Translated_221_residues MSLVSITSATEAQEWRELCQWAEEHYRCRTFPKDVRIPTRPGLVYITQEGVVRLVSQTPERREVFVGFITAGFPFELSNP ERFELKACTHADRTTVMWFYWQDLEQWPYLHQKIQENFRQQLQRKLLWLGNLGQRRAIDRLKGFLSLLIEEYGQPCEQGM YLPWPLTHAQIGDAIGATRVTVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA >Mature_220_residues SLVSITSATEAQEWRELCQWAEEHYRCRTFPKDVRIPTRPGLVYITQEGVVRLVSQTPERREVFVGFITAGFPFELSNPE RFELKACTHADRTTVMWFYWQDLEQWPYLHQKIQENFRQQLQRKLLWLGNLGQRRAIDRLKGFLSLLIEEYGQPCEQGMY LPWPLTHAQIGDAIGATRVTVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25576; Mature: 25445
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVSITSATEAQEWRELCQWAEEHYRCRTFPKDVRIPTRPGLVYITQEGVVRLVSQTPE CCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCC RREVFVGFITAGFPFELSNPERFELKACTHADRTTVMWFYWQDLEQWPYLHQKIQENFRQ HHHEEEEEEECCCCEECCCCCCEEEEECCCCCCCEEEEEEECCHHHCHHHHHHHHHHHHH QLQRKLLWLGNLGQRRAIDRLKGFLSLLIEEYGQPCEQGMYLPWPLTHAQIGDAIGATRV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHH TVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA HHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCCCHHHCCC >Mature Secondary Structure SLVSITSATEAQEWRELCQWAEEHYRCRTFPKDVRIPTRPGLVYITQEGVVRLVSQTPE CEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCC RREVFVGFITAGFPFELSNPERFELKACTHADRTTVMWFYWQDLEQWPYLHQKIQENFRQ HHHEEEEEEECCCCEECCCCCCEEEEECCCCCCCEEEEEEECCHHHCHHHHHHHHHHHHH QLQRKLLWLGNLGQRRAIDRLKGFLSLLIEEYGQPCEQGMYLPWPLTHAQIGDAIGATRV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHH TVTRLLGSLRSKGFVQVLDQNLICIPNGVKLQPTPKKAASA HHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA