| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608345
Identifier: 86608345
GI number: 86608345
Start: 896539
End: 897762
Strand: Reverse
Name: 86608345
Synonym: CYB_0863
Alternate gene names: NA
Gene position: 897762-896539 (Counterclockwise)
Preceding gene: 86608346
Following gene: 86608343
Centisome position: 29.47
GC content: 59.15
Gene sequence:
>1224_bases ATGTTCCCCATTCTTCATCTGCAGGGGGATCCCCAACAACGAGGCCAACAGTATGGATCCCAGGCGGCTCCCCTCATTCG CCACAGCATTGCTAGTTACGCCCGCCAATTTGCCCACCGCTGTGGTCTCACCTGGCAGCAGGCCCAGGCCCAAGCAGAGG GATCCCTGCCCTGGCTAGAGCGCCACGTGCCCCACCTGCTGGAAGAAATCCAAGGAATTGCCGCGGGGAGTGGCTTTCGT TTCGCCGAGATTCTGGCCCTCAATTTGCGCACCGAGATTTTATCCAGATCGGTTGTCGGTGGATCCCATCTCGACTGCGC CGCTGCTCTGGAACACAATCTCCAAAACGGGGTGCCCCAGCACCCAGCGGATCCTGCTCATGAATTCAAGGGGATTGATC TCATCGATCCAGCCCAAGCCAACCCGGATGGGGGAGAATGCACCACCCTGGCGGCCTTGCCCCAGGTTACCTCCACCCAC CACACCTACTTGGCCCAAACCTGGGATTGGATCGGGGAGCAGCGCAGGGCCTGTGTGCTGTTGTGCGTTCGCTCCGATAA CCACCCTGCCTACCTCACCCTGACCGAAGCTGGGATCCTGGCCAAAATCGGCCTCAACCGAGCAGGGTTGGCCGTGGCCC TCAACCTCTTGCGCTCTACCCTAGATGGGCAAACCGAGGGAATGCCGGTGCATCTGCTGTTGCGCTTATTGTTGGAGTGC GAGGAGTGGCAGCAGGCTGTAGAGAGGGTGGGATCCTACCCCTACACCGCCTCCTCTTGTGTCAGCGTTGCCGGTATTAC AGGACAGGCGACAGGCCTACAGCCCGCTAAGGCGACCAGCTTTGAAATCAGTCCACGAGGAATTGGCCTGCATCTCCCTC AAGGAGGGATCCTCGCCCACACCAATCATTTCCTGGATCCGGCCTTGCGAGAAGATGGCTGCCCCCCCCACACAGGATCC TCCACAAGGCTAGAACGGGCCTATCATTTGCTTCGCCAGAGCGCTCAAACCGGAACCCTAGAGGCGGTCACTCTTCAAAA AATCCTACAGGACCGGACGAATGCCCCCCACTGCATCTGCCGCTATCCGGATCCCCATCTGCCCGTCTGGGATCGCACCG AAAGCGTAGCGGCTGTGGTGATGGATCTGAACCAACAAATCCTGCATGTGGCCCCCAACATTCCCGATCACGTGGAGTTT GTACCGATTTCCGGGATTTTCTAG
Upstream 100 bases:
>100_bases GTTCACTCAGGTTCATAACATCAGCGGCGGCATTCACGCTTGGGCTTGTGAGGTGGATCCCTCCCTGCCCACCTATTGAG GTCACGGGCAAACCAGCACC
Downstream 100 bases:
>100_bases GTTTGGAAGATGCAGTAGGATCGAGCTGAAGAGAGAGGAGGGGCAGGCGATCGCGTCCTTGCTGTCGCCACCAGACAGCG GGATGAGGAAAGTCCGGGCT
Product: acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein
Products: NA
Alternate protein names: Acyl-Co A6-Aminopenicillanic Acid Acyl-Transferase Family; Acyl-Co A6-Aminopenicillanic Acid Acyl-Transferase; Acyltransferase; Acyl-Co A6-Aminopenicillanic-Acid-Acyltransferase; Acyl-CoA-6-Aminopenicillanic Acid Acyltransferase; Peptidase C; Isopenicillin-N N-Acyltransferase
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MFPILHLQGDPQQRGQQYGSQAAPLIRHSIASYARQFAHRCGLTWQQAQAQAEGSLPWLERHVPHLLEEIQGIAAGSGFR FAEILALNLRTEILSRSVVGGSHLDCAAALEHNLQNGVPQHPADPAHEFKGIDLIDPAQANPDGGECTTLAALPQVTSTH HTYLAQTWDWIGEQRRACVLLCVRSDNHPAYLTLTEAGILAKIGLNRAGLAVALNLLRSTLDGQTEGMPVHLLLRLLLEC EEWQQAVERVGSYPYTASSCVSVAGITGQATGLQPAKATSFEISPRGIGLHLPQGGILAHTNHFLDPALREDGCPPHTGS STRLERAYHLLRQSAQTGTLEAVTLQKILQDRTNAPHCICRYPDPHLPVWDRTESVAAVVMDLNQQILHVAPNIPDHVEF VPISGIF
Sequences:
>Translated_407_residues MFPILHLQGDPQQRGQQYGSQAAPLIRHSIASYARQFAHRCGLTWQQAQAQAEGSLPWLERHVPHLLEEIQGIAAGSGFR FAEILALNLRTEILSRSVVGGSHLDCAAALEHNLQNGVPQHPADPAHEFKGIDLIDPAQANPDGGECTTLAALPQVTSTH HTYLAQTWDWIGEQRRACVLLCVRSDNHPAYLTLTEAGILAKIGLNRAGLAVALNLLRSTLDGQTEGMPVHLLLRLLLEC EEWQQAVERVGSYPYTASSCVSVAGITGQATGLQPAKATSFEISPRGIGLHLPQGGILAHTNHFLDPALREDGCPPHTGS STRLERAYHLLRQSAQTGTLEAVTLQKILQDRTNAPHCICRYPDPHLPVWDRTESVAAVVMDLNQQILHVAPNIPDHVEF VPISGIF >Mature_407_residues MFPILHLQGDPQQRGQQYGSQAAPLIRHSIASYARQFAHRCGLTWQQAQAQAEGSLPWLERHVPHLLEEIQGIAAGSGFR FAEILALNLRTEILSRSVVGGSHLDCAAALEHNLQNGVPQHPADPAHEFKGIDLIDPAQANPDGGECTTLAALPQVTSTH HTYLAQTWDWIGEQRRACVLLCVRSDNHPAYLTLTEAGILAKIGLNRAGLAVALNLLRSTLDGQTEGMPVHLLLRLLLEC EEWQQAVERVGSYPYTASSCVSVAGITGQATGLQPAKATSFEISPRGIGLHLPQGGILAHTNHFLDPALREDGCPPHTGS STRLERAYHLLRQSAQTGTLEAVTLQKILQDRTNAPHCICRYPDPHLPVWDRTESVAAVVMDLNQQILHVAPNIPDHVEF VPISGIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44354; Mature: 44354
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPILHLQGDPQQRGQQYGSQAAPLIRHSIASYARQFAHRCGLTWQQAQAQAEGSLPWLE CCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHH RHVPHLLEEIQGIAAGSGFRFAEILALNLRTEILSRSVVGGSHLDCAAALEHNLQNGVPQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC HPADPAHEFKGIDLIDPAQANPDGGECTTLAALPQVTSTHHTYLAQTWDWIGEQRRACVL CCCCHHHHCCCCCCCCCCCCCCCCCCEEEHHHCCCHHCCHHHHHHHHHHHHHHCCCEEEE LCVRSDNHPAYLTLTEAGILAKIGLNRAGLAVALNLLRSTLDGQTEGMPVHLLLRLLLEC EEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH EEWQQAVERVGSYPYTASSCVSVAGITGQATGLQPAKATSFEISPRGIGLHLPQGGILAH HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEC TNHFLDPALREDGCPPHTGSSTRLERAYHLLRQSAQTGTLEAVTLQKILQDRTNAPHCIC CCHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEE RYPDPHLPVWDRTESVAAVVMDLNQQILHVAPNIPDHVEFVPISGIF ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC >Mature Secondary Structure MFPILHLQGDPQQRGQQYGSQAAPLIRHSIASYARQFAHRCGLTWQQAQAQAEGSLPWLE CCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHH RHVPHLLEEIQGIAAGSGFRFAEILALNLRTEILSRSVVGGSHLDCAAALEHNLQNGVPQ HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC HPADPAHEFKGIDLIDPAQANPDGGECTTLAALPQVTSTHHTYLAQTWDWIGEQRRACVL CCCCHHHHCCCCCCCCCCCCCCCCCCEEEHHHCCCHHCCHHHHHHHHHHHHHHCCCEEEE LCVRSDNHPAYLTLTEAGILAKIGLNRAGLAVALNLLRSTLDGQTEGMPVHLLLRLLLEC EEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH EEWQQAVERVGSYPYTASSCVSVAGITGQATGLQPAKATSFEISPRGIGLHLPQGGILAH HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEC TNHFLDPALREDGCPPHTGSSTRLERAYHLLRQSAQTGTLEAVTLQKILQDRTNAPHCIC CCHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEE RYPDPHLPVWDRTESVAAVVMDLNQQILHVAPNIPDHVEFVPISGIF ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA