Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608342

Identifier: 86608342

GI number: 86608342

Start: 893829

End: 894107

Strand: Direct

Name: 86608342

Synonym: CYB_0860

Alternate gene names: NA

Gene position: 893829-894107 (Clockwise)

Preceding gene: 86608341

Following gene: 86608344

Centisome position: 29.34

GC content: 48.03

Gene sequence:

>279_bases
TTGATTGGGTTGTCATACGTGAGCGTCCCCAAGCTGAAACGCTACGCTGTTCGCTACGATTCTATGCCCCTGATGGTTTA
TCGGGAATTGGCTGCCCATTTGGCTTGTGTTTCAGGGGTAGAAACGGAGCTGGAGTGGAAAAAAAACTCCACCTTTCGCT
ACCAAGACAGCCAAATAGAGGCATTGCATATTCATCAAGAACCCGATGCCGACATAGAACAAATTAAGCGTATTCTTGAC
CACTATGGAGCGTGGCAGTACAGCCCCTTAGAAGACTAG

Upstream 100 bases:

>100_bases
TCGCGGAAGTGATGCGGAGCATTTGGGCGACACCGCGGAGTAGTTAGGAAGCGTCTTAATCTAGCTTGAAGTGACTATAC
TTGAGTTGTTTTGAGCTACG

Downstream 100 bases:

>100_bases
CTCTCTCTGCAACCCAAAAGGGATCCCTAGGGATAGGGATCCCCGGATGATTCCTCTGCAAGGTCTGGGAAAAACCAGTT
CAGCGAGCAGCTTGGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIEALHIHQEPDADIEQIKRILD
HYGAWQYSPLED

Sequences:

>Translated_92_residues
MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIEALHIHQEPDADIEQIKRILD
HYGAWQYSPLED
>Mature_92_residues
MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIEALHIHQEPDADIEQIKRILD
HYGAWQYSPLED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10786; Mature: 10786

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIE
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCEE
ALHIHQEPDADIEQIKRILDHYGAWQYSPLED
EEEECCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIE
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCEE
ALHIHQEPDADIEQIKRILDHYGAWQYSPLED
EEEECCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA