Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608342
Identifier: 86608342
GI number: 86608342
Start: 893829
End: 894107
Strand: Direct
Name: 86608342
Synonym: CYB_0860
Alternate gene names: NA
Gene position: 893829-894107 (Clockwise)
Preceding gene: 86608341
Following gene: 86608344
Centisome position: 29.34
GC content: 48.03
Gene sequence:
>279_bases TTGATTGGGTTGTCATACGTGAGCGTCCCCAAGCTGAAACGCTACGCTGTTCGCTACGATTCTATGCCCCTGATGGTTTA TCGGGAATTGGCTGCCCATTTGGCTTGTGTTTCAGGGGTAGAAACGGAGCTGGAGTGGAAAAAAAACTCCACCTTTCGCT ACCAAGACAGCCAAATAGAGGCATTGCATATTCATCAAGAACCCGATGCCGACATAGAACAAATTAAGCGTATTCTTGAC CACTATGGAGCGTGGCAGTACAGCCCCTTAGAAGACTAG
Upstream 100 bases:
>100_bases TCGCGGAAGTGATGCGGAGCATTTGGGCGACACCGCGGAGTAGTTAGGAAGCGTCTTAATCTAGCTTGAAGTGACTATAC TTGAGTTGTTTTGAGCTACG
Downstream 100 bases:
>100_bases CTCTCTCTGCAACCCAAAAGGGATCCCTAGGGATAGGGATCCCCGGATGATTCCTCTGCAAGGTCTGGGAAAAACCAGTT CAGCGAGCAGCTTGGCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIEALHIHQEPDADIEQIKRILD HYGAWQYSPLED
Sequences:
>Translated_92_residues MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIEALHIHQEPDADIEQIKRILD HYGAWQYSPLED >Mature_92_residues MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIEALHIHQEPDADIEQIKRILD HYGAWQYSPLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10786; Mature: 10786
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIE CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCEE ALHIHQEPDADIEQIKRILDHYGAWQYSPLED EEEECCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIGLSYVSVPKLKRYAVRYDSMPLMVYRELAAHLACVSGVETELEWKKNSTFRYQDSQIE CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCEE ALHIHQEPDADIEQIKRILDHYGAWQYSPLED EEEECCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA