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The map label for this gene is 86608325

Identifier: 86608325

GI number: 86608325

Start: 877089

End: 878468

Strand: Reverse

Name: 86608325

Synonym: CYB_0843

Alternate gene names: NA

Gene position: 878468-877089 (Counterclockwise)

Preceding gene: 86608328

Following gene: 86608324

Centisome position: 28.83

GC content: 55.07

Gene sequence:

>1380_bases
ATGCCCGTGCTTCAATGCTTGAAAGCCGTCATCGAGAGGATCCCTATGGCTAATACCCTTTTGACCACTCTAGGCACCAG
CCCCTACAGCGAGACGGTGTATGTTTTTGGGGAGCGGAAAGCCGATAGAACCCGTTATGTTGCCAAAGCCCTCTGTCAGC
TCTTTGACATCGAGAGGGTGATTGTGCTGCTAACCCAAGAAGCACATGACACCCATTGGAAGCATCTACAGGACTGCCTA
CCCCCCCACGTGGAGAAAATTGCCAAGGCCATTCCTGAAGGGAAAACCGAGGCAGAGACCTGGGAGATCTTCGATGTGCT
GGTCGATAGCATCGAGCCCCATACGCGGCTGGTTTTCGATATCACCCACGCCTTTCGCTCCATCCCCGTGCTGGTGCTCT
TGGGAGCTGCCCTTTTGCGCAAGGCCAAAAATGTAGAGATTCAGGGTCTCTACTATGGTCTGTACCGCTCTGGCCAAGCG
GAAACCCCCATTATCGATCTCACCCCCGCCCTTCGTCTTTTGGATTGGCTGACGGCTACCGACAAATTCATCAGCACCGG
CTCGGCGCTGGAGTTGGGTCAACTTTTGGATACGGTTCAACGGGACTTTTACCGCCGACAAAAGTCTGGCAAAGGGGATC
CCAGACCTACTCGGCTGCAAAGCTTTGGCCGAGCCATCCGCAATGTTTCCCGCTCTCTTGAACTGGTAAGACCTGTCAAT
CTCCTAAAAGAGGACTTGCCCAATTTGCAAAAGCACTCCACCGCGGATCTGGAGCAAGAGGTGGGTCAATTTGCCAAGCC
TTTTGGCCTGCTGCTGCGAAGCATTCAGGATAGCTACAGCCAACTGGCTCTACCCGCGGACAGGGCTTCGGATCCCAAAG
CCCAAGTTCAAAAGCAATTTCAACTGCTGCGCTGGTATGTAGAAAAGCGCCTCATCACCCAAGCTCTTCTACTGGCCCGG
GAGTGGGTGGTCTCCGCCCTTTGCCTCTGTGAGGGGATCCAAAACTACCTCGAACGAGAAGAGCGGCAGGGAATTGAACA
CCAGTTGGCATCCCTCATTCCACGAGAAGACCAGCCCCTTGGAGATCCCCCTGCGACTGGCGAATCGGGCCGATCCCTCA
TCCCACGGGAAGACCAGCCCCAGGCGCTTCCTCCTATTACCGCCCATGTGCCCGACGCCAAGCAGCTTGCCGATCTCTGG
TCTCGCCTCAGCCAGTACCGCAACGATGTTGCCCATGTGCAGATGAATCCAGACCCTTTGAACAGCGAAGCTCTAGAAAG
CTTTGTTTTGCAAGACCTGCTGCCTGGCCTGGAAGAGCTGTTTCCCAAATTGACCTGGGCAGAAGGGAAGTTGGAAGGGG
ATCTTTCCACTTCTCCGTAG

Upstream 100 bases:

>100_bases
GAGGATGCCACTTTTCGGGAGAGGATAGGGCAACATTCAACCCAGAACCCTCTCCAGGCAACTTGAGAAGGGGGGGCTTC
CAAGCTGCAGTAGCTTGAAG

Downstream 100 bases:

>100_bases
GCTAAAGACATCGGTTCGCCCTCAGGTTCTGGGTTTTTGGTCAAACAACGGCTATTGAGAAATACTGAAGAAAACTGAGG
GCTGGCCGGGATCAGATCGA

Product: CRISPR-associated TM1812 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MPVLQCLKAVIERIPMANTLLTTLGTSPYSETVYVFGERKADRTRYVAKALCQLFDIERVIVLLTQEAHDTHWKHLQDCL
PPHVEKIAKAIPEGKTEAETWEIFDVLVDSIEPHTRLVFDITHAFRSIPVLVLLGAALLRKAKNVEIQGLYYGLYRSGQA
ETPIIDLTPALRLLDWLTATDKFISTGSALELGQLLDTVQRDFYRRQKSGKGDPRPTRLQSFGRAIRNVSRSLELVRPVN
LLKEDLPNLQKHSTADLEQEVGQFAKPFGLLLRSIQDSYSQLALPADRASDPKAQVQKQFQLLRWYVEKRLITQALLLAR
EWVVSALCLCEGIQNYLEREERQGIEHQLASLIPREDQPLGDPPATGESGRSLIPREDQPQALPPITAHVPDAKQLADLW
SRLSQYRNDVAHVQMNPDPLNSEALESFVLQDLLPGLEELFPKLTWAEGKLEGDLSTSP

Sequences:

>Translated_459_residues
MPVLQCLKAVIERIPMANTLLTTLGTSPYSETVYVFGERKADRTRYVAKALCQLFDIERVIVLLTQEAHDTHWKHLQDCL
PPHVEKIAKAIPEGKTEAETWEIFDVLVDSIEPHTRLVFDITHAFRSIPVLVLLGAALLRKAKNVEIQGLYYGLYRSGQA
ETPIIDLTPALRLLDWLTATDKFISTGSALELGQLLDTVQRDFYRRQKSGKGDPRPTRLQSFGRAIRNVSRSLELVRPVN
LLKEDLPNLQKHSTADLEQEVGQFAKPFGLLLRSIQDSYSQLALPADRASDPKAQVQKQFQLLRWYVEKRLITQALLLAR
EWVVSALCLCEGIQNYLEREERQGIEHQLASLIPREDQPLGDPPATGESGRSLIPREDQPQALPPITAHVPDAKQLADLW
SRLSQYRNDVAHVQMNPDPLNSEALESFVLQDLLPGLEELFPKLTWAEGKLEGDLSTSP
>Mature_458_residues
PVLQCLKAVIERIPMANTLLTTLGTSPYSETVYVFGERKADRTRYVAKALCQLFDIERVIVLLTQEAHDTHWKHLQDCLP
PHVEKIAKAIPEGKTEAETWEIFDVLVDSIEPHTRLVFDITHAFRSIPVLVLLGAALLRKAKNVEIQGLYYGLYRSGQAE
TPIIDLTPALRLLDWLTATDKFISTGSALELGQLLDTVQRDFYRRQKSGKGDPRPTRLQSFGRAIRNVSRSLELVRPVNL
LKEDLPNLQKHSTADLEQEVGQFAKPFGLLLRSIQDSYSQLALPADRASDPKAQVQKQFQLLRWYVEKRLITQALLLARE
WVVSALCLCEGIQNYLEREERQGIEHQLASLIPREDQPLGDPPATGESGRSLIPREDQPQALPPITAHVPDAKQLADLWS
RLSQYRNDVAHVQMNPDPLNSEALESFVLQDLLPGLEELFPKLTWAEGKLEGDLSTSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013383
- InterPro:   IPR011742 [H]

Pfam domain/function: PF09530 Cas_TM1812 [H]

EC number: NA

Molecular weight: Translated: 51803; Mature: 51672

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLQCLKAVIERIPMANTLLTTLGTSPYSETVYVFGERKADRTRYVAKALCQLFDIERV
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
IVLLTQEAHDTHWKHLQDCLPPHVEKIAKAIPEGKTEAETWEIFDVLVDSIEPHTRLVFD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
ITHAFRSIPVLVLLGAALLRKAKNVEIQGLYYGLYRSGQAETPIIDLTPALRLLDWLTAT
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCEEECHHHHHHHHHHHHH
DKFISTGSALELGQLLDTVQRDFYRRQKSGKGDPRPTRLQSFGRAIRNVSRSLELVRPVN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLKEDLPNLQKHSTADLEQEVGQFAKPFGLLLRSIQDSYSQLALPADRASDPKAQVQKQF
HHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QLLRWYVEKRLITQALLLAREWVVSALCLCEGIQNYLEREERQGIEHQLASLIPREDQPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
GDPPATGESGRSLIPREDQPQALPPITAHVPDAKQLADLWSRLSQYRNDVAHVQMNPDPL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCC
NSEALESFVLQDLLPGLEELFPKLTWAEGKLEGDLSTSP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PVLQCLKAVIERIPMANTLLTTLGTSPYSETVYVFGERKADRTRYVAKALCQLFDIERV
CHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
IVLLTQEAHDTHWKHLQDCLPPHVEKIAKAIPEGKTEAETWEIFDVLVDSIEPHTRLVFD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
ITHAFRSIPVLVLLGAALLRKAKNVEIQGLYYGLYRSGQAETPIIDLTPALRLLDWLTAT
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCEEECHHHHHHHHHHHHH
DKFISTGSALELGQLLDTVQRDFYRRQKSGKGDPRPTRLQSFGRAIRNVSRSLELVRPVN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLKEDLPNLQKHSTADLEQEVGQFAKPFGLLLRSIQDSYSQLALPADRASDPKAQVQKQF
HHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QLLRWYVEKRLITQALLLAREWVVSALCLCEGIQNYLEREERQGIEHQLASLIPREDQPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
GDPPATGESGRSLIPREDQPQALPPITAHVPDAKQLADLWSRLSQYRNDVAHVQMNPDPL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCC
NSEALESFVLQDLLPGLEELFPKLTWAEGKLEGDLSTSP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]