Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608323

Identifier: 86608323

GI number: 86608323

Start: 872763

End: 873902

Strand: Reverse

Name: 86608323

Synonym: CYB_0841

Alternate gene names: NA

Gene position: 873902-872763 (Counterclockwise)

Preceding gene: 86608324

Following gene: 86608322

Centisome position: 28.68

GC content: 62.81

Gene sequence:

>1140_bases
ATGAGTTGGTTTACCCTATCACCCTTGGATGTGTGGATGTTTCGAGATGCTAAGCCCTTTGCCCCGGGAGAGCGGGCCTG
GGCCAATAGCAGCTTTCCCCCTAGCGGCCATACCTTGGCCGGGGCTGTTCAAGCCTACCTGGGCCAACCCTTGACGCTGC
GGCTGCGGGGCCCCTTTCTCTGCCACGACGAAAGGCTCTATTTCCCCGCCCCTCTGCATCTGGAAGACGGATTCCCCCTT
GTTCCCGTTCCTTGGTTGGACGAGAGGGATCCCTACTTCCATTGCCACTGGGATCCCACCCGGCCAGCCCCCTTGGTTTC
CTTGAGGCCGGTAGAGGAGGAACCCGAACGCAGCCAGAGCAGCAAGAAGAAAAAAACAGGAGGCTACCTGCCCTTCGAGG
TGGTGCAAAAGGCGCTGGAAGGCAAAGGCTGGGATCTCAGCCAGGCCGTCAAGCCGCCGTTGAAGTATGAAGTACGGCCC
CACAACACCCTGCAGGTGAGCAAGCGGCAAGTGCGAGAAGCCGATGGCTACTTTGTGGAGACCTGCATCCGCCTTCAGCC
GGGCTGGAGTTTGGCCCTTTCCATCGAGGGCTGGGATCCCGATCGCGAAGCCTGGGATCCCCTACCCCTTACTCAGGAAG
CAGTGCTGCGGCTGGGGGGAGAAGGCCACTGCGCTTTGCTGGCCCCCTGTCCGAAGCTGCAGGAGCAGTGGCAGCAGTTG
CAGGCCCTTTCTCAGGCCGCCTTTTGCCAAGCCGGACGCGCTTTGGCCTACTTAGCGACCCCAGGCGTGTTCATCAAGAA
GGTGGAGGGACGCTCCCTATGCCGTGCCTGGCCCTGGGAATGGAGATTGGCCACTCCCCACCCCGCCCATCCCCTCACCG
GCCCCTTGGTGAGCGTGGCCACCGGCAAGCCCGTTGCCATCAGTGGACGCCTGCGGGTGGATCGCCCCCCAGAGCAGCGG
CAGATGAGCCTGCCCGCCCCCCAAGTTTTTGCCGCGCCCCCTGGCAGTATCTACTACCTGGAGCAGCCGGCCCCCCTCAA
CCAAGAAGAGCCCGAGCTAGAAGATGGCCGGCTCAACGTGTTCCACCGCTGGCGGCTGTTGGGCTATAGCGAGCTCCTAT
GGCTGCCTTGGGCCAACTGA

Upstream 100 bases:

>100_bases
CCGCCCAGCCCCAGGAGTGGGATCTGGAGATCAAAAACTGGTTCAAGCTGGCGGCTTTTGTGCTGCGCAACCGCACCGTG
AAATTGGGGAGGAACGGCCG

Downstream 100 bases:

>100_bases
GTTTTGCTTTCAGTCCTTGAATACTTACTCGCAAAAGGAGCCCATCCATGACTTTTCAGATTGCCTACCTCCATCTATTG
ACTCCCCTGCACACTGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSWFTLSPLDVWMFRDAKPFAPGERAWANSSFPPSGHTLAGAVQAYLGQPLTLRLRGPFLCHDERLYFPAPLHLEDGFPL
VPVPWLDERDPYFHCHWDPTRPAPLVSLRPVEEEPERSQSSKKKKTGGYLPFEVVQKALEGKGWDLSQAVKPPLKYEVRP
HNTLQVSKRQVREADGYFVETCIRLQPGWSLALSIEGWDPDREAWDPLPLTQEAVLRLGGEGHCALLAPCPKLQEQWQQL
QALSQAAFCQAGRALAYLATPGVFIKKVEGRSLCRAWPWEWRLATPHPAHPLTGPLVSVATGKPVAISGRLRVDRPPEQR
QMSLPAPQVFAAPPGSIYYLEQPAPLNQEEPELEDGRLNVFHRWRLLGYSELLWLPWAN

Sequences:

>Translated_379_residues
MSWFTLSPLDVWMFRDAKPFAPGERAWANSSFPPSGHTLAGAVQAYLGQPLTLRLRGPFLCHDERLYFPAPLHLEDGFPL
VPVPWLDERDPYFHCHWDPTRPAPLVSLRPVEEEPERSQSSKKKKTGGYLPFEVVQKALEGKGWDLSQAVKPPLKYEVRP
HNTLQVSKRQVREADGYFVETCIRLQPGWSLALSIEGWDPDREAWDPLPLTQEAVLRLGGEGHCALLAPCPKLQEQWQQL
QALSQAAFCQAGRALAYLATPGVFIKKVEGRSLCRAWPWEWRLATPHPAHPLTGPLVSVATGKPVAISGRLRVDRPPEQR
QMSLPAPQVFAAPPGSIYYLEQPAPLNQEEPELEDGRLNVFHRWRLLGYSELLWLPWAN
>Mature_378_residues
SWFTLSPLDVWMFRDAKPFAPGERAWANSSFPPSGHTLAGAVQAYLGQPLTLRLRGPFLCHDERLYFPAPLHLEDGFPLV
PVPWLDERDPYFHCHWDPTRPAPLVSLRPVEEEPERSQSSKKKKTGGYLPFEVVQKALEGKGWDLSQAVKPPLKYEVRPH
NTLQVSKRQVREADGYFVETCIRLQPGWSLALSIEGWDPDREAWDPLPLTQEAVLRLGGEGHCALLAPCPKLQEQWQQLQ
ALSQAAFCQAGRALAYLATPGVFIKKVEGRSLCRAWPWEWRLATPHPAHPLTGPLVSVATGKPVAISGRLRVDRPPEQRQ
MSLPAPQVFAAPPGSIYYLEQPAPLNQEEPELEDGRLNVFHRWRLLGYSELLWLPWAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42850; Mature: 42719

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFTLSPLDVWMFRDAKPFAPGERAWANSSFPPSGHTLAGAVQAYLGQPLTLRLRGPFL
CCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEE
CHDERLYFPAPLHLEDGFPLVPVPWLDERDPYFHCHWDPTRPAPLVSLRPVEEEPERSQS
ECCCCEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHH
SKKKKTGGYLPFEVVQKALEGKGWDLSQAVKPPLKYEVRPHNTLQVSKRQVREADGYFVE
HHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCEEEE
TCIRLQPGWSLALSIEGWDPDREAWDPLPLTQEAVLRLGGEGHCALLAPCPKLQEQWQQL
EEEEECCCCEEEEEEECCCCCHHCCCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHHH
QALSQAAFCQAGRALAYLATPGVFIKKVEGRSLCRAWPWEWRLATPHPAHPLTGPLVSVA
HHHHHHHHHHCCCEEEEEECCCEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCEEEEC
TGKPVAISGRLRVDRPPEQRQMSLPAPQVFAAPPGSIYYLEQPAPLNQEEPELEDGRLNV
CCCCEEEECEEECCCCCHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE
FHRWRLLGYSELLWLPWAN
EEEEEECCCEEEEEEECCC
>Mature Secondary Structure 
SWFTLSPLDVWMFRDAKPFAPGERAWANSSFPPSGHTLAGAVQAYLGQPLTLRLRGPFL
CEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEE
CHDERLYFPAPLHLEDGFPLVPVPWLDERDPYFHCHWDPTRPAPLVSLRPVEEEPERSQS
ECCCCEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHH
SKKKKTGGYLPFEVVQKALEGKGWDLSQAVKPPLKYEVRPHNTLQVSKRQVREADGYFVE
HHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCEEEE
TCIRLQPGWSLALSIEGWDPDREAWDPLPLTQEAVLRLGGEGHCALLAPCPKLQEQWQQL
EEEEECCCCEEEEEEECCCCCHHCCCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHHH
QALSQAAFCQAGRALAYLATPGVFIKKVEGRSLCRAWPWEWRLATPHPAHPLTGPLVSVA
HHHHHHHHHHCCCEEEEEECCCEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCEEEEC
TGKPVAISGRLRVDRPPEQRQMSLPAPQVFAAPPGSIYYLEQPAPLNQEEPELEDGRLNV
CCCCEEEECEEECCCCCHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE
FHRWRLLGYSELLWLPWAN
EEEEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA