The gene/protein map for NC_012032 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86608319

Identifier: 86608319

GI number: 86608319

Start: 869033

End: 870856

Strand: Reverse

Name: 86608319

Synonym: CYB_0837

Alternate gene names: NA

Gene position: 870856-869033 (Counterclockwise)

Preceding gene: 86608320

Following gene: 86608318

Centisome position: 28.58

GC content: 52.96

Gene sequence:

>1824_bases
ATGCCTAGCAATCGTCCTGCCAACTCCCAACCTTCTCCCTGGCTAGGGCATCCCTTGGATCCCAACCCCAGCCCAGATCC
CACAGCGAGCTTTATTGAATATCTGCGTTGGATGAGGGCTCCAGCAACTCCTTTCAAAGACGGAGCCAAAGTCGATCTGG
TGCACCAGGCAGAAGCAAAGGCAAACTACGGAGCGCGTCTTCAAGTTCTGAATGCTCGCATCAAACGCATTGCCGGAGAA
AAAAACACTTTTCAGGTCACCTGTCCCTGGCGAATTCGGGTGGGTGGAGCCAAAGGCCCGGAGAGCATGCTGCTCCCCGC
TTTCGATCCCTTAGGGATCCCTTACCTTCCCAGCTCCACCTTGCGGGGGGTAGCCCGCGCCCAGGCTATTCGAGAGTTGA
TGCAGAAGCACAATCTGTCTTGGGAGGAGGCAGATAAAGCAGTGGCACCCTGGCTTGGGCATCTAGAAGCTGAGGACAAA
GATAGTGCTGGCAAGGTGATCTTTTTGGATGCCTACCCTGTGCCGACCAGGACTCAAAGACAAGGGGATCCCGATAACTC
CAGGTCGGGAGGCTTGGCTGTTGATATTGCCAATAACGTTTGGAGTTGGGATGGCAATAGCTTGAAATATAGCCCAAATC
CCAATGTCTTTTTTTCTCTCAAACAGGCCACGTTTTTGATCGGGATCCGCAAAGGCCCAGGCTGCACCGACGAGATGTTA
GCCCAAGTGAAAGAATGGCTCATCCGCGGGCTGGAGCAAGGAGTGGGATCCCAAGTCAATACCGGCTACGGTCGGCTGAT
TCAAACTGGCAAAACTCTATCTCAATACAAGGGAGAATTCTTGCGGCTGCCTTTTGAGCTGGAGGGTCAGTTGATCCACG
GGCGGCAAGTGGTCAACTGGAGACCTGATAAGAACCGGTATGACAACAAATCAATTGCCGAAGTCCGACCGGTAGCCTTT
AAGAACATGCTGCGCTACTGGTTTCGAACCTTTGCCCTGGGTGTTTTGCCCGTGAAGCAGGTGCAGGAATGGGAGGGGCA
ACTTTTTGGGGCCATCACTCCCCAGCAAAAACATGGCTGGATCCACGTGGATCTTTTGAAGGGGCGAGTAACTCAACCAG
AGCCGGAACCCAACCAAGCGGGAAAGGGGAAGCGTGCCGGACGGCAAGAAGGGATCCTCATTCTCAGCCTTTCTGAGGAG
TGCCACAACCATGCTTCAAAGGAGAACCAGAAAGCGGTGCAAAAGCTCTTTCGGAATCTGACCTGGATGCTGTTTCACCT
GGGAGGTATTGGCCAGGGGGCAAGAAGGCCCTGCTACTCTCGCCAAGACCGCGGTAGAGCTCCTTGGTGGCGGGGATCCA
CCCTCATTCCCAACTCCGAAGATTCATTTTGGAATCTGCCAGAGTCGGTAGAGGAATTCCAGAAACTCTTTCAGAAGCGG
CTGCGGGGCTTTTTTGAGGCGCTCCAGGTTTTGACTGGGCAGGCCATTGATCCCAGCAATCCCAGGAGCTTTGGTCAGGT
CGGCAAAGAAAAGTTGCCTGAAGCTGTGGATGCCCATTGCAGGATTGTAGTCTGCAGCGGCCCAGAAGAGTTTAATAAGC
CCTATGCTTTGGCTGTTTTGCACAAGGTAGGCAAGATAGCGCCAGGAAAATACGACAAGTTTCTCTGCGGCGACACAGGC
ACGCCGTCCCCTGTTTGGATTGCAGATTTGGATGACTATCAGGTGGTTACCGTTTTTAGGGCAACGGTGAATCCTAGGAA
AAGTTATCTTGAACAGCTCAGGAAAAATGCTGATGATTTTGGAATAATCTGGCCCTTGAAGTAG

Upstream 100 bases:

>100_bases
TCGACGCGCCTTAGAAATTGGCACCAGCGCTATGTTGCGCGAATTTCGGGAAACGCTTCGCAATTCCTAATACTGCTTTC
CATCTTTAGGAGAAGATCAA

Downstream 100 bases:

>100_bases
AGATCTTGGAGAATCTCTGGAGGAATAAAATGTCCAAAAAGAGGATCAATGCCAAAGTTCTTAGAAACCTTGTTACAGCT
GTGGTCAACGGCTCGATCAC

Product: CRISPR-associated RAMP family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Family Protein

Number of amino acids: Translated: 607; Mature: 606

Protein sequence:

>607_residues
MPSNRPANSQPSPWLGHPLDPNPSPDPTASFIEYLRWMRAPATPFKDGAKVDLVHQAEAKANYGARLQVLNARIKRIAGE
KNTFQVTCPWRIRVGGAKGPESMLLPAFDPLGIPYLPSSTLRGVARAQAIRELMQKHNLSWEEADKAVAPWLGHLEAEDK
DSAGKVIFLDAYPVPTRTQRQGDPDNSRSGGLAVDIANNVWSWDGNSLKYSPNPNVFFSLKQATFLIGIRKGPGCTDEML
AQVKEWLIRGLEQGVGSQVNTGYGRLIQTGKTLSQYKGEFLRLPFELEGQLIHGRQVVNWRPDKNRYDNKSIAEVRPVAF
KNMLRYWFRTFALGVLPVKQVQEWEGQLFGAITPQQKHGWIHVDLLKGRVTQPEPEPNQAGKGKRAGRQEGILILSLSEE
CHNHASKENQKAVQKLFRNLTWMLFHLGGIGQGARRPCYSRQDRGRAPWWRGSTLIPNSEDSFWNLPESVEEFQKLFQKR
LRGFFEALQVLTGQAIDPSNPRSFGQVGKEKLPEAVDAHCRIVVCSGPEEFNKPYALAVLHKVGKIAPGKYDKFLCGDTG
TPSPVWIADLDDYQVVTVFRATVNPRKSYLEQLRKNADDFGIIWPLK

Sequences:

>Translated_607_residues
MPSNRPANSQPSPWLGHPLDPNPSPDPTASFIEYLRWMRAPATPFKDGAKVDLVHQAEAKANYGARLQVLNARIKRIAGE
KNTFQVTCPWRIRVGGAKGPESMLLPAFDPLGIPYLPSSTLRGVARAQAIRELMQKHNLSWEEADKAVAPWLGHLEAEDK
DSAGKVIFLDAYPVPTRTQRQGDPDNSRSGGLAVDIANNVWSWDGNSLKYSPNPNVFFSLKQATFLIGIRKGPGCTDEML
AQVKEWLIRGLEQGVGSQVNTGYGRLIQTGKTLSQYKGEFLRLPFELEGQLIHGRQVVNWRPDKNRYDNKSIAEVRPVAF
KNMLRYWFRTFALGVLPVKQVQEWEGQLFGAITPQQKHGWIHVDLLKGRVTQPEPEPNQAGKGKRAGRQEGILILSLSEE
CHNHASKENQKAVQKLFRNLTWMLFHLGGIGQGARRPCYSRQDRGRAPWWRGSTLIPNSEDSFWNLPESVEEFQKLFQKR
LRGFFEALQVLTGQAIDPSNPRSFGQVGKEKLPEAVDAHCRIVVCSGPEEFNKPYALAVLHKVGKIAPGKYDKFLCGDTG
TPSPVWIADLDDYQVVTVFRATVNPRKSYLEQLRKNADDFGIIWPLK
>Mature_606_residues
PSNRPANSQPSPWLGHPLDPNPSPDPTASFIEYLRWMRAPATPFKDGAKVDLVHQAEAKANYGARLQVLNARIKRIAGEK
NTFQVTCPWRIRVGGAKGPESMLLPAFDPLGIPYLPSSTLRGVARAQAIRELMQKHNLSWEEADKAVAPWLGHLEAEDKD
SAGKVIFLDAYPVPTRTQRQGDPDNSRSGGLAVDIANNVWSWDGNSLKYSPNPNVFFSLKQATFLIGIRKGPGCTDEMLA
QVKEWLIRGLEQGVGSQVNTGYGRLIQTGKTLSQYKGEFLRLPFELEGQLIHGRQVVNWRPDKNRYDNKSIAEVRPVAFK
NMLRYWFRTFALGVLPVKQVQEWEGQLFGAITPQQKHGWIHVDLLKGRVTQPEPEPNQAGKGKRAGRQEGILILSLSEEC
HNHASKENQKAVQKLFRNLTWMLFHLGGIGQGARRPCYSRQDRGRAPWWRGSTLIPNSEDSFWNLPESVEEFQKLFQKRL
RGFFEALQVLTGQAIDPSNPRSFGQVGKEKLPEAVDAHCRIVVCSGPEEFNKPYALAVLHKVGKIAPGKYDKFLCGDTGT
PSPVWIADLDDYQVVTVFRATVNPRKSYLEQLRKNADDFGIIWPLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68223; Mature: 68091

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNRPANSQPSPWLGHPLDPNPSPDPTASFIEYLRWMRAPATPFKDGAKVDLVHQAEAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHC
ANYGARLQVLNARIKRIAGEKNTFQVTCPWRIRVGGAKGPESMLLPAFDPLGIPYLPSST
CCCCCHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
LRGVARAQAIRELMQKHNLSWEEADKAVAPWLGHLEAEDKDSAGKVIFLDAYPVPTRTQR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCC
QGDPDNSRSGGLAVDIANNVWSWDGNSLKYSPNPNVFFSLKQATFLIGIRKGPGCTDEML
CCCCCCCCCCCEEEEECCCEECCCCCCEEECCCCCEEEEEECEEEEEEECCCCCCHHHHH
AQVKEWLIRGLEQGVGSQVNTGYGRLIQTGKTLSQYKGEFLRLPFELEGQLIHGRQVVNW
HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHCCCEEECCCEECCEEEECEEEEEE
RPDKNRYDNKSIAEVRPVAFKNMLRYWFRTFALGVLPVKQVQEWEGQLFGAITPQQKHGW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCC
IHVDLLKGRVTQPEPEPNQAGKGKRAGRQEGILILSLSEECHNHASKENQKAVQKLFRNL
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCHHHHHHHHHHHHHH
TWMLFHLGGIGQGARRPCYSRQDRGRAPWWRGSTLIPNSEDSFWNLPESVEEFQKLFQKR
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LRGFFEALQVLTGQAIDPSNPRSFGQVGKEKLPEAVDAHCRIVVCSGPEEFNKPYALAVL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCEEEEEECCHHHHCCCHHHHHH
HKVGKIAPGKYDKFLCGDTGTPSPVWIADLDDYQVVTVFRATVNPRKSYLEQLRKNADDF
HHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCEEEEEEEHHCCHHHHHHHHHHCCCCCC
GIIWPLK
EEEECCC
>Mature Secondary Structure 
PSNRPANSQPSPWLGHPLDPNPSPDPTASFIEYLRWMRAPATPFKDGAKVDLVHQAEAK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHC
ANYGARLQVLNARIKRIAGEKNTFQVTCPWRIRVGGAKGPESMLLPAFDPLGIPYLPSST
CCCCCHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
LRGVARAQAIRELMQKHNLSWEEADKAVAPWLGHLEAEDKDSAGKVIFLDAYPVPTRTQR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCC
QGDPDNSRSGGLAVDIANNVWSWDGNSLKYSPNPNVFFSLKQATFLIGIRKGPGCTDEML
CCCCCCCCCCCEEEEECCCEECCCCCCEEECCCCCEEEEEECEEEEEEECCCCCCHHHHH
AQVKEWLIRGLEQGVGSQVNTGYGRLIQTGKTLSQYKGEFLRLPFELEGQLIHGRQVVNW
HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHCCCEEECCCEECCEEEECEEEEEE
RPDKNRYDNKSIAEVRPVAFKNMLRYWFRTFALGVLPVKQVQEWEGQLFGAITPQQKHGW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCC
IHVDLLKGRVTQPEPEPNQAGKGKRAGRQEGILILSLSEECHNHASKENQKAVQKLFRNL
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCHHHHHHHHHHHHHH
TWMLFHLGGIGQGARRPCYSRQDRGRAPWWRGSTLIPNSEDSFWNLPESVEEFQKLFQKR
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LRGFFEALQVLTGQAIDPSNPRSFGQVGKEKLPEAVDAHCRIVVCSGPEEFNKPYALAVL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHCCCEEEEEECCHHHHCCCHHHHHH
HKVGKIAPGKYDKFLCGDTGTPSPVWIADLDDYQVVTVFRATVNPRKSYLEQLRKNADDF
HHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCEEEEEEEHHCCHHHHHHHHHHCCCCCC
GIIWPLK
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA