| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ybfF [C]
Identifier: 86608293
GI number: 86608293
Start: 839996
End: 841399
Strand: Reverse
Name: ybfF [C]
Synonym: CYB_0811
Alternate gene names: 86608293
Gene position: 841399-839996 (Counterclockwise)
Preceding gene: 86608294
Following gene: 86608292
Centisome position: 27.62
GC content: 59.26
Gene sequence:
>1404_bases TTGACCCACCCCTTGTATTACTGGCGGCAAAAAAACCGCTACTACCACGAGGATCTGGAGCGGCTGCATCGCTTTTTTGT CCCTGCCGGTTTGCGCATCTTGGAGATTGGTTCCGGCACGGGATCCCTGCTCAATGCCTTGCAGCCCAGCTTCGGGGTGG GGATCGACCGGGATGCGGACATTGTTGCCCAAGCTCAGGCAGAGTTTCCCCATCTCCATTTCCGGGTGCAAGATGCCCAC ACGCTGGACAAAGGGGATCCCGTCTTGGCGGAGCCTTTTGATGTGATCTTGCTCGTCAATACCCTGGGCTACCTGGCCGA CATCCAGCAGGTTCTCCAGCAGTTGCGCCGCTTCTGTACCCCACGCACCCGCCTGATCCTCTCCCACCACAACCCGCTCT GGGAGCCGATTCTGGGCTTGGCAACCGCTCTGAAGCAACGGATGCCTCTGCCGGCAGCCAACTGGTTATCGGCAGCCGAT GTGGCCAACCTGCTGCACTTGGCAGGATACGAGGTCATTCAGCAGGGCAAGCGGCTGTTGTTGCCGCGGCGGATCCCGTT CCTTTCGACTGTGATCAACCGGGTGATTGCCCCATTGCCCGGGATCAACGCCCTCTGCCTGACAGAGTACACGATCGCTC GCCTGCAGCCCGACCCTGCCTGGGATCCCCCCCCTGAGCAGCAGCCTTCCTGCACCGTGGTGATTCCGGCTCGGAATGAA GCGGGCAACATCCGCCGCTGCGTGGAACATTTGCCCGAGATGGGATCCCGCACCGAGATCATTTTTGTGGAGGGGCATTC CAGCGACGGGACTTGGGCCGAGATCCAGCGGGTACAGGCGGAATACCAAGGGATCCGCAATATCCGGGCTCTACGGCAGG AGGGCAAGGGCAAGGGGGATGCGGTGCGCAAGGGGCTAGCCGCCGCTACAGGGGATGTGTTGATCATCCTCGATGCCGAT TTGACGGTACAGGCAGAGGACATGCCCAAGTTTTTCCGGGCTGTGGCTTCCGGGCGATGTGATTTTGCCAATGGTTGTCG CCTTATCTATCCCCTGAAACCAGAGGCAATGCCTCGGCTAAACCAATGGGCCAATCGTTTTTTTGCCGCTCTCCTCTCCT ACATTCTCGGCATCCGCATCAAAGATTCCCTCTGTGGCACCAAGGCCCTGTGGCGGGAGGATTACCAGCAGATTGCCAAG CTGTGCCAAGAGTGGGGGGATTTCGACCCGTTTGGAGATTTTGACCTGTTGCTGGGATCCGCCAAGCGCACCCTGAAGAT CCTGGATATCCCCGTGCGCTATTTCCCCAGAACCTATGGTCGCTCCAACATTCACCATGTGCGAGAGGGGCTGCGGCTGC TGCAGATCTGTGGCTTTGCCCTCAAGCGCTTTAAGGGATACTGA
Upstream 100 bases:
>100_bases CAACAGATTGAGATCTAAGGTGCTTGAAGCCGTTATTGCAAACGATCACACCTTATGATCGAAGACTATCCAGCGATACC CCAGGGATCCCTTGCCAGCG
Downstream 100 bases:
>100_bases AGTTTGCTCTGACCCAAAGGTGCCGGTCTGTACTTCTGTCGAGGCAGGGCCAGTCTCTGCAAGTACTTCTCCACCGTTGG GATTCCCGCCTAGGCACCCA
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: Glycosyltransferase; Dolichol-P-Glucose Synthetase; Family 2 Glycosyl Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyl Transferase Family 2 Protein; Dolichol-Phosphate Mannosyltransferase; Methyltransferase Domain Family; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Methyltransferase Type; Dolichol-Phosphate Mannose Synthase; Histidinol-Phosphate Phosphatase Family Protein; Histidinol-Phosphate Phosphatase; Polyprenol-Phosphate Mannosyltransferase; Fused Dolichol-Phosphate Mannosyltransferase/ Protein; Dolichyl-Phosphate Mannose Synthase Related Protein; Dolichyl-Phosphate Hexose Synthase; Dolichyl-P-Glucose Synthetase; Polysaccharide Biosynthesis Protein; Undecaprenol Glycosyltransferase; Dolichol Monophosphate Mannose Synthase; Glycosyl Transferase
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTHPLYYWRQKNRYYHEDLERLHRFFVPAGLRILEIGSGTGSLLNALQPSFGVGIDRDADIVAQAQAEFPHLHFRVQDAH TLDKGDPVLAEPFDVILLVNTLGYLADIQQVLQQLRRFCTPRTRLILSHHNPLWEPILGLATALKQRMPLPAANWLSAAD VANLLHLAGYEVIQQGKRLLLPRRIPFLSTVINRVIAPLPGINALCLTEYTIARLQPDPAWDPPPEQQPSCTVVIPARNE AGNIRRCVEHLPEMGSRTEIIFVEGHSSDGTWAEIQRVQAEYQGIRNIRALRQEGKGKGDAVRKGLAAATGDVLIILDAD LTVQAEDMPKFFRAVASGRCDFANGCRLIYPLKPEAMPRLNQWANRFFAALLSYILGIRIKDSLCGTKALWREDYQQIAK LCQEWGDFDPFGDFDLLLGSAKRTLKILDIPVRYFPRTYGRSNIHHVREGLRLLQICGFALKRFKGY
Sequences:
>Translated_467_residues MTHPLYYWRQKNRYYHEDLERLHRFFVPAGLRILEIGSGTGSLLNALQPSFGVGIDRDADIVAQAQAEFPHLHFRVQDAH TLDKGDPVLAEPFDVILLVNTLGYLADIQQVLQQLRRFCTPRTRLILSHHNPLWEPILGLATALKQRMPLPAANWLSAAD VANLLHLAGYEVIQQGKRLLLPRRIPFLSTVINRVIAPLPGINALCLTEYTIARLQPDPAWDPPPEQQPSCTVVIPARNE AGNIRRCVEHLPEMGSRTEIIFVEGHSSDGTWAEIQRVQAEYQGIRNIRALRQEGKGKGDAVRKGLAAATGDVLIILDAD LTVQAEDMPKFFRAVASGRCDFANGCRLIYPLKPEAMPRLNQWANRFFAALLSYILGIRIKDSLCGTKALWREDYQQIAK LCQEWGDFDPFGDFDLLLGSAKRTLKILDIPVRYFPRTYGRSNIHHVREGLRLLQICGFALKRFKGY >Mature_466_residues THPLYYWRQKNRYYHEDLERLHRFFVPAGLRILEIGSGTGSLLNALQPSFGVGIDRDADIVAQAQAEFPHLHFRVQDAHT LDKGDPVLAEPFDVILLVNTLGYLADIQQVLQQLRRFCTPRTRLILSHHNPLWEPILGLATALKQRMPLPAANWLSAADV ANLLHLAGYEVIQQGKRLLLPRRIPFLSTVINRVIAPLPGINALCLTEYTIARLQPDPAWDPPPEQQPSCTVVIPARNEA GNIRRCVEHLPEMGSRTEIIFVEGHSSDGTWAEIQRVQAEYQGIRNIRALRQEGKGKGDAVRKGLAAATGDVLIILDADL TVQAEDMPKFFRAVASGRCDFANGCRLIYPLKPEAMPRLNQWANRFFAALLSYILGIRIKDSLCGTKALWREDYQQIAKL CQEWGDFDPFGDFDLLLGSAKRTLKILDIPVRYFPRTYGRSNIHHVREGLRLLQICGFALKRFKGY
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6325441, Length=109, Percent_Identity=34.8623853211009, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52819; Mature: 52688
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPLYYWRQKNRYYHEDLERLHRFFVPAGLRILEIGSGTGSLLNALQPSFGVGIDRDAD CCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCH IVAQAQAEFPHLHFRVQDAHTLDKGDPVLAEPFDVILLVNTLGYLADIQQVLQQLRRFCT HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRTRLILSHHNPLWEPILGLATALKQRMPLPAANWLSAADVANLLHLAGYEVIQQGKRLL CHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCC LPRRIPFLSTVINRVIAPLPGINALCLTEYTIARLQPDPAWDPPPEQQPSCTVVIPARNE CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCC AGNIRRCVEHLPEMGSRTEIIFVEGHSSDGTWAEIQRVQAEYQGIRNIRALRQEGKGKGD CCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AVRKGLAAATGDVLIILDADLTVQAEDMPKFFRAVASGRCDFANGCRLIYPLKPEAMPRL HHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH NQWANRFFAALLSYILGIRIKDSLCGTKALWREDYQQIAKLCQEWGDFDPFGDFDLLLGS HHHHHHHHHHHHHHHHCCEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC AKRTLKILDIPVRYFPRTYGRSNIHHVREGLRLLQICGFALKRFKGY HHHEEEEEECCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure THPLYYWRQKNRYYHEDLERLHRFFVPAGLRILEIGSGTGSLLNALQPSFGVGIDRDAD CCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCH IVAQAQAEFPHLHFRVQDAHTLDKGDPVLAEPFDVILLVNTLGYLADIQQVLQQLRRFCT HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRTRLILSHHNPLWEPILGLATALKQRMPLPAANWLSAADVANLLHLAGYEVIQQGKRLL CHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCC LPRRIPFLSTVINRVIAPLPGINALCLTEYTIARLQPDPAWDPPPEQQPSCTVVIPARNE CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCC AGNIRRCVEHLPEMGSRTEIIFVEGHSSDGTWAEIQRVQAEYQGIRNIRALRQEGKGKGD CCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AVRKGLAAATGDVLIILDADLTVQAEDMPKFFRAVASGRCDFANGCRLIYPLKPEAMPRL HHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH NQWANRFFAALLSYILGIRIKDSLCGTKALWREDYQQIAKLCQEWGDFDPFGDFDLLLGS HHHHHHHHHHHHHHHHCCEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC AKRTLKILDIPVRYFPRTYGRSNIHHVREGLRLLQICGFALKRFKGY HHHEEEEEECCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA