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The map label for this gene is visC [C]

Identifier: 86608264

GI number: 86608264

Start: 804484

End: 805785

Strand: Direct

Name: visC [C]

Synonym: CYB_0780

Alternate gene names: 86608264

Gene position: 804484-805785 (Clockwise)

Preceding gene: 86608259

Following gene: 86608266

Centisome position: 26.41

GC content: 62.98

Gene sequence:

>1302_bases
TTGCCCACTTCCGCTGCTCCCCTAGCCATTGCTCCGACAGCAGCCAAGCCAAGGCGACTGGACTTCGAGGTGGTGATTGC
CGGAGCTGGGATGGTGGGATCCACCTTAGCAGCCGCTTTGGGCCAGGCCGGGATCCGCGTCGGGCTGATCGAGGGGCGGG
ATCTCTCGCAGGGGGTGGGGCCCGATGGCCGAGCCAGCGCTTTGGCTCTGGGGACAGCCCGCATTCTGCAGCGGATTGGG
GTATGGCCCCTTATGGAGGCCTGGGGAGTTTCTCCCATTCACCGCATTCAGGTCTCTGATGGGGAAAGCCCCTGGGTGGC
TCAGCTGCGCCGTGAGATGCTCCAAGCGCCGGCGCTGGGCTACGTCGTGGAAAATCAAATCACCCAAAAGGCCCTGTTGC
AGCGCATTCGCGAGTGCCCTTCGGTAACCCTTTTCAGCCCCGCCCAGGTGCAAAGTTTCTCCCCTGCAGCAGATCACATT
CGGGTAGAGCTGGCCCAGGAGGGATCCCGGCAAACTCTGCGAGCTGCTCTGCTAGTGGTTGCAGATGGGGCCCGTTCGCG
GCTGCGGGAACAGGCTGGGATCCCGTTATCCCGCTGGGGCTATGGACAGGTGTGCATCGTTTCCACCCTCACCCATGAGC
ATCCTCACCGGCAGGTGGCCTACGAGCGCTTTCAGGTCAGCGGTCCCTTCGCCATTTTGCCCACCTCCGATCCCCATCGC
AGTTGCGTCGTCTGGACAGTGCGCCAAGGGGATCGAGATCGGCTGATGGGCTTGTCTGAGGCTGAGTTTTTGCAGGCCAT
CCGGCCCTGCTTTGGATCCCAGTTGGGAGCCTTGCTGGCGGCCTCTCCCAGAGCCTGTTATGAGCCACAGCGGGCCCATG
CCCAAACCTACATCGGATCCCGGCTAGCTTTGGTGGGGGATGCTGCTCACACCACCCATCCGCTGGGGGGGCAGGGAGCG
AATCTGGGCATGCGGGATGTGGCGGCCTTGGCTGCCCTGTTGATCGAAGCCAAAATGGCGGGCCGGGATCCCGGCGATCC
GGCTTTGTTAAAAGCCTACGAGCGCTGTCGCCGCCCAGAAAACGCGCTGGTTCTTTTTGCAACCGATGCTGCCAATCGCC
TCTTTTCCAACCGAAGCTGGCCGTTGCTGGTCTTGCGTCGCCTGGGCCTGTGGGGACTGGAGGTTTTGCCGCTGCTCAAG
CCTGCTTTGATGCGCCAAGCAATGGGGATCCGCCCCCACCAACCCCAACTGCAGCAGCTCCCTTTCCCTGCACCCCCGGA
ACCTCTGGCTACGCCTGTCTAG

Upstream 100 bases:

>100_bases
GCGCTTTGACCCCACTTGCCGCTTGTCCTTAGCGGCCTGCCGGGTGCAGGAACCCTAGAATGGAAGTTAAGCCCACTTGC
CGTGAGTGCCCATGAGCCTT

Downstream 100 bases:

>100_bases
ATCCGGCCAAACTGTTGAGAGCTGGGCCCAGATCCTCGCCCGCCGCCTTTGTCCCCAGCAGACCAAGCGCTCCACAGGGA
TCAAGGCTGCTCCAGGGGTA

Product: UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MPTSAAPLAIAPTAAKPRRLDFEVVIAGAGMVGSTLAAALGQAGIRVGLIEGRDLSQGVGPDGRASALALGTARILQRIG
VWPLMEAWGVSPIHRIQVSDGESPWVAQLRREMLQAPALGYVVENQITQKALLQRIRECPSVTLFSPAQVQSFSPAADHI
RVELAQEGSRQTLRAALLVVADGARSRLREQAGIPLSRWGYGQVCIVSTLTHEHPHRQVAYERFQVSGPFAILPTSDPHR
SCVVWTVRQGDRDRLMGLSEAEFLQAIRPCFGSQLGALLAASPRACYEPQRAHAQTYIGSRLALVGDAAHTTHPLGGQGA
NLGMRDVAALAALLIEAKMAGRDPGDPALLKAYERCRRPENALVLFATDAANRLFSNRSWPLLVLRRLGLWGLEVLPLLK
PALMRQAMGIRPHQPQLQQLPFPAPPEPLATPV

Sequences:

>Translated_433_residues
MPTSAAPLAIAPTAAKPRRLDFEVVIAGAGMVGSTLAAALGQAGIRVGLIEGRDLSQGVGPDGRASALALGTARILQRIG
VWPLMEAWGVSPIHRIQVSDGESPWVAQLRREMLQAPALGYVVENQITQKALLQRIRECPSVTLFSPAQVQSFSPAADHI
RVELAQEGSRQTLRAALLVVADGARSRLREQAGIPLSRWGYGQVCIVSTLTHEHPHRQVAYERFQVSGPFAILPTSDPHR
SCVVWTVRQGDRDRLMGLSEAEFLQAIRPCFGSQLGALLAASPRACYEPQRAHAQTYIGSRLALVGDAAHTTHPLGGQGA
NLGMRDVAALAALLIEAKMAGRDPGDPALLKAYERCRRPENALVLFATDAANRLFSNRSWPLLVLRRLGLWGLEVLPLLK
PALMRQAMGIRPHQPQLQQLPFPAPPEPLATPV
>Mature_432_residues
PTSAAPLAIAPTAAKPRRLDFEVVIAGAGMVGSTLAAALGQAGIRVGLIEGRDLSQGVGPDGRASALALGTARILQRIGV
WPLMEAWGVSPIHRIQVSDGESPWVAQLRREMLQAPALGYVVENQITQKALLQRIRECPSVTLFSPAQVQSFSPAADHIR
VELAQEGSRQTLRAALLVVADGARSRLREQAGIPLSRWGYGQVCIVSTLTHEHPHRQVAYERFQVSGPFAILPTSDPHRS
CVVWTVRQGDRDRLMGLSEAEFLQAIRPCFGSQLGALLAASPRACYEPQRAHAQTYIGSRLALVGDAAHTTHPLGGQGAN
LGMRDVAALAALLIEAKMAGRDPGDPALLKAYERCRRPENALVLFATDAANRLFSNRSWPLLVLRRLGLWGLEVLPLLKP
ALMRQAMGIRPHQPQLQQLPFPAPPEPLATPV

Specific function: Not Yet Known. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=387, Percent_Identity=30.749354005168, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI32967307, Length=331, Percent_Identity=32.02416918429, Blast_Score=147, Evalue=2e-35,
Organism=Escherichia coli, GI1789273, Length=392, Percent_Identity=36.4795918367347, Blast_Score=228, Evalue=6e-61,
Organism=Escherichia coli, GI1789274, Length=393, Percent_Identity=36.1323155216285, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI1786883, Length=393, Percent_Identity=35.1145038167939, Blast_Score=192, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI25146631, Length=432, Percent_Identity=26.3888888888889, Blast_Score=142, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6321694, Length=452, Percent_Identity=26.1061946902655, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI19920760, Length=433, Percent_Identity=29.7921478060046, Blast_Score=163, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 46745; Mature: 46614

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSAAPLAIAPTAAKPRRLDFEVVIAGAGMVGSTLAAALGQAGIRVGLIEGRDLSQGVG
CCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
PDGRASALALGTARILQRIGVWPLMEAWGVSPIHRIQVSDGESPWVAQLRREMLQAPALG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHH
YVVENQITQKALLQRIRECPSVTLFSPAQVQSFSPAADHIRVELAQEGSRQTLRAALLVV
HHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCHHHEEEEEHHCCCHHHHHHHHHHE
ADGARSRLREQAGIPLSRWGYGQVCIVSTLTHEHPHRQVAYERFQVSGPFAILPTSDPHR
ECCHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCC
SCVVWTVRQGDRDRLMGLSEAEFLQAIRPCFGSQLGALLAASPRACYEPQRAHAQTYIGS
EEEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCC
RLALVGDAAHTTHPLGGQGANLGMRDVAALAALLIEAKMAGRDPGDPALLKAYERCRRPE
EEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
NALVLFATDAANRLFSNRSWPLLVLRRLGLWGLEVLPLLKPALMRQAMGIRPHQPQLQQL
CEEEEEEECHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PFPAPPEPLATPV
CCCCCCCCCCCCC
>Mature Secondary Structure 
PTSAAPLAIAPTAAKPRRLDFEVVIAGAGMVGSTLAAALGQAGIRVGLIEGRDLSQGVG
CCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
PDGRASALALGTARILQRIGVWPLMEAWGVSPIHRIQVSDGESPWVAQLRREMLQAPALG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHH
YVVENQITQKALLQRIRECPSVTLFSPAQVQSFSPAADHIRVELAQEGSRQTLRAALLVV
HHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCHHHEEEEEHHCCCHHHHHHHHHHE
ADGARSRLREQAGIPLSRWGYGQVCIVSTLTHEHPHRQVAYERFQVSGPFAILPTSDPHR
ECCHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCC
SCVVWTVRQGDRDRLMGLSEAEFLQAIRPCFGSQLGALLAASPRACYEPQRAHAQTYIGS
EEEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCC
RLALVGDAAHTTHPLGGQGANLGMRDVAALAALLIEAKMAGRDPGDPALLKAYERCRRPE
EEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
NALVLFATDAANRLFSNRSWPLLVLRRLGLWGLEVLPLLKPALMRQAMGIRPHQPQLQQL
CEEEEEEECHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PFPAPPEPLATPV
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]