Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608248
Identifier: 86608248
GI number: 86608248
Start: 785522
End: 785767
Strand: Reverse
Name: 86608248
Synonym: CYB_0764
Alternate gene names: NA
Gene position: 785767-785522 (Counterclockwise)
Preceding gene: 86608249
Following gene: 86608247
Centisome position: 25.79
GC content: 50.81
Gene sequence:
>246_bases GTGAGTCGGATCTACACCGCGGTACTACCCCCAAGGCGATCTTTTGTCAGCTCCATCCACAAAAGCCCCAGCACTCTTCA GGGCTTGAGTTCTTTTTGCCCCCATCACCTTTTGGCAAGGGCAGGAACACCTCTTGAGGGAGACGAGGTTTTTCCTTCGG AGCTGCTGGCTCAAGGAACAAGAGAAAAACCTGTCTTCAAAAAAGTCTCAGACTTTCGGTTGCAGGAGTACATCACAAGG GTATGA
Upstream 100 bases:
>100_bases TCACCATCTCAGCGGCGGTTTTTTGGAAAGTCGAGCCTGTTTTCTGGCTGTGATCAGAGTTTGGGGCAGCCGACGAGTGG GGATGAGGCTGTAGAAAGCG
Downstream 100 bases:
>100_bases TCTTAAGAGAAGGATGTAGGACATTAAAAAATGTCAGATATACCACCACAACCTTTAACCGGGAAGGCTCTGCTGCAGAA GGTCGAAGCTTTGGGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSRIYTAVLPPRRSFVSSIHKSPSTLQGLSSFCPHHLLARAGTPLEGDEVFPSELLAQGTREKPVFKKVSDFRLQEYITR V
Sequences:
>Translated_81_residues MSRIYTAVLPPRRSFVSSIHKSPSTLQGLSSFCPHHLLARAGTPLEGDEVFPSELLAQGTREKPVFKKVSDFRLQEYITR V >Mature_80_residues SRIYTAVLPPRRSFVSSIHKSPSTLQGLSSFCPHHLLARAGTPLEGDEVFPSELLAQGTREKPVFKKVSDFRLQEYITRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9114; Mature: 8982
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIYTAVLPPRRSFVSSIHKSPSTLQGLSSFCPHHLLARAGTPLEGDEVFPSELLAQGT CCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC REKPVFKKVSDFRLQEYITRV CCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRIYTAVLPPRRSFVSSIHKSPSTLQGLSSFCPHHLLARAGTPLEGDEVFPSELLAQGT CCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC REKPVFKKVSDFRLQEYITRV CCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA