Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608246
Identifier: 86608246
GI number: 86608246
Start: 783496
End: 784899
Strand: Reverse
Name: 86608246
Synonym: CYB_0762
Alternate gene names: NA
Gene position: 784899-783496 (Counterclockwise)
Preceding gene: 86608247
Following gene: 86608245
Centisome position: 25.76
GC content: 59.62
Gene sequence:
>1404_bases ATGCAACAGAAGGTTCAGCCACCCCTCAAGTTTTTGCCACCGCGATTGACGCCTTGGGTCGTTCGTTTTGCTCAAGCAGG CTTGCCCTTTTGGTTGCGATGGACCAAAGGGATCCCTCGCGTTGAAGTGGAGGGGGGAGAGCGTTTGGCTCAGCTTTATC AGCAGTTTGAGGCGGGCAAGATTCGCCTGTTGGTGGCGTTTCGACACCCGACCCTCGATGATCCCCCCTGCTTGATGTAC TTGTTTGCCCATCTTCTGCCGCAGGTGGCCCAACGCCAGGGGATCGGCTTTCGGGGCCGACCCCACGTTTTGTTTGTCTA CGACCGCGGCCTACCTCTGTGGCTGGGATCCGTTGCCCGTTGGGGCTTGCCGCGCTTGGGCGGGATCCCGATTTTGCGAG GCCGTCTGGATCGGGCAGGGCTAAAGAGTTCTCGTGAGCAGTTTGTATCGGGCCGATATCCGCTGGCGGTAGCTCCAGAA GGAACGATCAACGGTATGAGCAGTCTTCTCAACCCGTTGGAGCCGGGGGTAGCCCAGATGAGCTTTTGGGCGGTGGAGGA TCTGCACAAGGCGGGACGGCCAGAGCAGGTGCTGATCTTGCCGGTAGGCCTTCGCTATTCCTACCTGCGGGATCCCAGTG CCGCTCTGAATAGATTGCTCAGCCGCATGGAGGCCGATTGCAAGCTGCCACCCCCGCGCTCAACCCATGCCAGTCAGGCC TTTTTGCTGGCCCGTATTCTTCGCTTGGGAGAACACCTGCTGCAAGTCGTGCAGACCTTCTATGAGCGCTTTTATGCCCC TGCCCTTCCTGCTGCAGATAGAGCCCAAGTTAAAGAGGGGGATCTGTTGGCGCGTCTTCAAAGCTTATCGGATCTGGTCC TGCGCGTGGCCGAGCAGCATTTTGGTCTGGAGCCCCAGGGAGACTTAATCGAGCGGCGGCACCGCATCGAACAGGCGGGC TGGGCCTGGATCTACCGCGAAGATATTGCCGATATTGCTGCTCTCTCGGCTTTGGAAAGGGGGCTGGCCAATCGAGTGGC TGCTGAGGCCAGTTTTCACCTCTGGCACATGCGCTTGGCGGAAACCTTAATGGTGTTTGCGGTGCGCCCTGTACCTGAGC AGCCCAGTTTGAGTCTGGATGAGTTGGCGGAAACCGCCCTGCGCCTCTGGAGTCTGCTGGCTTGGATCAAAGGAGAAAAT CCCGTCGGAACTGCTCCCCCCCGCTTGGGACCCCGCCTGGCCCGTTTCAGCATTGGGGATCCCCTCTCGGTTTCCGAACG CTGGCCCGCCTACCAGGCCAACCGCCGACAAGCCGTACAAGCCCTCACCCAAGATTTGCAAGCGGAAATGGAGCGGCTTA TCCAAGGGATCCCGTGCTCTCCTGTGGCTCTTCCTGCTGCCTAA
Upstream 100 bases:
>100_bases GACGAACTGTCACTGTGTGGCTTTCTTCCCGCTTTGCCCTCTTTAAGATGGGATCCAAAGCCTAGGTTCACCCTCTTTCT GACCCTAGATAAGGATCCCT
Downstream 100 bases:
>100_bases CATGCCTGGTCGGCTCAGGGGCAAAAAGTGTAACAATTCCTGAGACATCTTGTGAGATATTTCGTGAAAGTAAGACGAAC TTTTGCATTATCTGACAAGC
Product: acyltransferase domain-containing protein
Products: NA
Alternate protein names: Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MQQKVQPPLKFLPPRLTPWVVRFAQAGLPFWLRWTKGIPRVEVEGGERLAQLYQQFEAGKIRLLVAFRHPTLDDPPCLMY LFAHLLPQVAQRQGIGFRGRPHVLFVYDRGLPLWLGSVARWGLPRLGGIPILRGRLDRAGLKSSREQFVSGRYPLAVAPE GTINGMSSLLNPLEPGVAQMSFWAVEDLHKAGRPEQVLILPVGLRYSYLRDPSAALNRLLSRMEADCKLPPPRSTHASQA FLLARILRLGEHLLQVVQTFYERFYAPALPAADRAQVKEGDLLARLQSLSDLVLRVAEQHFGLEPQGDLIERRHRIEQAG WAWIYREDIADIAALSALERGLANRVAAEASFHLWHMRLAETLMVFAVRPVPEQPSLSLDELAETALRLWSLLAWIKGEN PVGTAPPRLGPRLARFSIGDPLSVSERWPAYQANRRQAVQALTQDLQAEMERLIQGIPCSPVALPAA
Sequences:
>Translated_467_residues MQQKVQPPLKFLPPRLTPWVVRFAQAGLPFWLRWTKGIPRVEVEGGERLAQLYQQFEAGKIRLLVAFRHPTLDDPPCLMY LFAHLLPQVAQRQGIGFRGRPHVLFVYDRGLPLWLGSVARWGLPRLGGIPILRGRLDRAGLKSSREQFVSGRYPLAVAPE GTINGMSSLLNPLEPGVAQMSFWAVEDLHKAGRPEQVLILPVGLRYSYLRDPSAALNRLLSRMEADCKLPPPRSTHASQA FLLARILRLGEHLLQVVQTFYERFYAPALPAADRAQVKEGDLLARLQSLSDLVLRVAEQHFGLEPQGDLIERRHRIEQAG WAWIYREDIADIAALSALERGLANRVAAEASFHLWHMRLAETLMVFAVRPVPEQPSLSLDELAETALRLWSLLAWIKGEN PVGTAPPRLGPRLARFSIGDPLSVSERWPAYQANRRQAVQALTQDLQAEMERLIQGIPCSPVALPAA >Mature_467_residues MQQKVQPPLKFLPPRLTPWVVRFAQAGLPFWLRWTKGIPRVEVEGGERLAQLYQQFEAGKIRLLVAFRHPTLDDPPCLMY LFAHLLPQVAQRQGIGFRGRPHVLFVYDRGLPLWLGSVARWGLPRLGGIPILRGRLDRAGLKSSREQFVSGRYPLAVAPE GTINGMSSLLNPLEPGVAQMSFWAVEDLHKAGRPEQVLILPVGLRYSYLRDPSAALNRLLSRMEADCKLPPPRSTHASQA FLLARILRLGEHLLQVVQTFYERFYAPALPAADRAQVKEGDLLARLQSLSDLVLRVAEQHFGLEPQGDLIERRHRIEQAG WAWIYREDIADIAALSALERGLANRVAAEASFHLWHMRLAETLMVFAVRPVPEQPSLSLDELAETALRLWSLLAWIKGEN PVGTAPPRLGPRLARFSIGDPLSVSERWPAYQANRRQAVQALTQDLQAEMERLIQGIPCSPVALPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52438; Mature: 52438
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQKVQPPLKFLPPRLTPWVVRFAQAGLPFWLRWTKGIPRVEVEGGERLAQLYQQFEAGK CCCCCCCCHHHCCCCCCHHHHHHHHCCCCEEEHHCCCCCEEEECCHHHHHHHHHHHCCCC IRLLVAFRHPTLDDPPCLMYLFAHLLPQVAQRQGIGFRGRPHVLFVYDRGLPLWLGSVAR EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH WGLPRLGGIPILRGRLDRAGLKSSREQFVSGRYPLAVAPEGTINGMSSLLNPLEPGVAQM CCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCHHHH SFWAVEDLHKAGRPEQVLILPVGLRYSYLRDPSAALNRLLSRMEADCKLPPPRSTHASQA HHHHHHHHHHCCCCCEEEEEEECCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH FLLARILRLGEHLLQVVQTFYERFYAPALPAADRAQVKEGDLLARLQSLSDLVLRVAEQH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH FGLEPQGDLIERRHRIEQAGWAWIYREDIADIAALSALERGLANRVAAEASFHLWHMRLA CCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLMVFAVRPVPEQPSLSLDELAETALRLWSLLAWIKGENPVGTAPPRLGPRLARFSIGD HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC PLSVSERWPAYQANRRQAVQALTQDLQAEMERLIQGIPCSPVALPAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQQKVQPPLKFLPPRLTPWVVRFAQAGLPFWLRWTKGIPRVEVEGGERLAQLYQQFEAGK CCCCCCCCHHHCCCCCCHHHHHHHHCCCCEEEHHCCCCCEEEECCHHHHHHHHHHHCCCC IRLLVAFRHPTLDDPPCLMYLFAHLLPQVAQRQGIGFRGRPHVLFVYDRGLPLWLGSVAR EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH WGLPRLGGIPILRGRLDRAGLKSSREQFVSGRYPLAVAPEGTINGMSSLLNPLEPGVAQM CCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCHHHH SFWAVEDLHKAGRPEQVLILPVGLRYSYLRDPSAALNRLLSRMEADCKLPPPRSTHASQA HHHHHHHHHHCCCCCEEEEEEECCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH FLLARILRLGEHLLQVVQTFYERFYAPALPAADRAQVKEGDLLARLQSLSDLVLRVAEQH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH FGLEPQGDLIERRHRIEQAGWAWIYREDIADIAALSALERGLANRVAAEASFHLWHMRLA CCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLMVFAVRPVPEQPSLSLDELAETALRLWSLLAWIKGENPVGTAPPRLGPRLARFSIGD HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC PLSVSERWPAYQANRRQAVQALTQDLQAEMERLIQGIPCSPVALPAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA