Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86608184

Identifier: 86608184

GI number: 86608184

Start: 715473

End: 716333

Strand: Direct

Name: 86608184

Synonym: CYB_0699

Alternate gene names: NA

Gene position: 715473-716333 (Clockwise)

Preceding gene: 86608183

Following gene: 86608186

Centisome position: 23.48

GC content: 56.56

Gene sequence:

>861_bases
ATGTCAACTGATGAGCAATCAGCACAGCAGGGCACTCCCCAGCCCAAGGTGGCTTCTCTAGGAGTTGCCGGGGATCGGGA
AGCGCGGAAGAGGGCTGCCCATGAAGATCTTCAGCCGCTCAAAGTCAGCACCCGCAAGGACTCCGTGCCGCTGACGCGAT
CCGCTCTGATGCGGCGTTTTAACCAGAGCTTTCCGCCTTTTTACAGCCAGTTTGTCAGCAGCGAGGTACAGGCCCAAAAT
CTGCGCTTGGCTTACACCCTCTACCAGACCCGCAAGGCGGTGGTACAGGTGCAGGACGAAGGTCGCAAGACGGTGGTCTG
TCTGGCCTACCGCAACCGACCTTCTCTGCTCAGCGATCTGTTTGGGGTGTTCACCGCTTTTAATCTCTCGGTGCATGGCA
TTCATCTCTATGGGCAGATCTACTCACCACACCTGGTGTTTATCCGCACCATTGTCTCCCGCGATGGCCACAGCCTTTCT
TCCCAAACCAAGCTCAGCCTAGAACGGGCCATTCACGAATGCCTGGCGGGTGTGTTTCGCGTTCATGAAACCTTGGCGCT
GGAGTTTGATCTCAAGGCCGGCCTGAAAGAGGCGCAGGTTTCTTTTTACTTTGACCCAGTGTTTCATTTGCCCACACTTT
TGGTGGATGTGGACAACCAGCCGGGCGCGTTTTACCGGGTGATGACGGCCCTCGCGCAGGAGGATTTGACCGTTGTTAAC
CTCAACTTGATGCTCCGCCGCAAGCAGACGCGCTTTATTTTCTACTTGCTGGGGCCGGATTCAACTCCAACCATGCCGGA
GTTCCTGGGGCAAAAATTGGCCTTGAGCATCCAGCAGCGGCTGCAAGGGGATCCCGCCTAG

Upstream 100 bases:

>100_bases
TGACATTCGTTCCGAGCCTCAGTGATTTTGCGGATAGATGGGGTTTGGCTGGGGCGTACTGAGCAACGATGGAGAAGGAG
CAACGCAGGTGGCGAGGTCG

Downstream 100 bases:

>100_bases
ATCTGCACGGGACTGGGAGGCAAATCGAAAAGGACGGTGTTCATGTAGCGCTCTGCCCAGGCGGGACCGAAGGCTTTTTC
CAAAACGCGGCGGGTGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSTDEQSAQQGTPQPKVASLGVAGDREARKRAAHEDLQPLKVSTRKDSVPLTRSALMRRFNQSFPPFYSQFVSSEVQAQN
LRLAYTLYQTRKAVVQVQDEGRKTVVCLAYRNRPSLLSDLFGVFTAFNLSVHGIHLYGQIYSPHLVFIRTIVSRDGHSLS
SQTKLSLERAIHECLAGVFRVHETLALEFDLKAGLKEAQVSFYFDPVFHLPTLLVDVDNQPGAFYRVMTALAQEDLTVVN
LNLMLRRKQTRFIFYLLGPDSTPTMPEFLGQKLALSIQQRLQGDPA

Sequences:

>Translated_286_residues
MSTDEQSAQQGTPQPKVASLGVAGDREARKRAAHEDLQPLKVSTRKDSVPLTRSALMRRFNQSFPPFYSQFVSSEVQAQN
LRLAYTLYQTRKAVVQVQDEGRKTVVCLAYRNRPSLLSDLFGVFTAFNLSVHGIHLYGQIYSPHLVFIRTIVSRDGHSLS
SQTKLSLERAIHECLAGVFRVHETLALEFDLKAGLKEAQVSFYFDPVFHLPTLLVDVDNQPGAFYRVMTALAQEDLTVVN
LNLMLRRKQTRFIFYLLGPDSTPTMPEFLGQKLALSIQQRLQGDPA
>Mature_285_residues
STDEQSAQQGTPQPKVASLGVAGDREARKRAAHEDLQPLKVSTRKDSVPLTRSALMRRFNQSFPPFYSQFVSSEVQAQNL
RLAYTLYQTRKAVVQVQDEGRKTVVCLAYRNRPSLLSDLFGVFTAFNLSVHGIHLYGQIYSPHLVFIRTIVSRDGHSLSS
QTKLSLERAIHECLAGVFRVHETLALEFDLKAGLKEAQVSFYFDPVFHLPTLLVDVDNQPGAFYRVMTALAQEDLTVVNL
NLMLRRKQTRFIFYLLGPDSTPTMPEFLGQKLALSIQQRLQGDPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32228; Mature: 32097

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDEQSAQQGTPQPKVASLGVAGDREARKRAAHEDLQPLKVSTRKDSVPLTRSALMRRF
CCCCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHH
NQSFPPFYSQFVSSEVQAQNLRLAYTLYQTRKAVVQVQDEGRKTVVCLAYRNRPSLLSDL
CCCCCHHHHHHHHHHHHHHCEEEEEHHHHHHHHHEEEECCCCEEEEEEEECCCCHHHHHH
FGVFTAFNLSVHGIHLYGQIYSPHLVFIRTIVSRDGHSLSSQTKLSLERAIHECLAGVFR
HHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
VHETLALEFDLKAGLKEAQVSFYFDPVFHLPTLLVDVDNQPGAFYRVMTALAQEDLTVVN
HHHHHEEEEEHHCCCCHHEEEEEECCHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEE
LNLMLRRKQTRFIFYLLGPDSTPTMPEFLGQKLALSIQQRLQGDPA
EEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STDEQSAQQGTPQPKVASLGVAGDREARKRAAHEDLQPLKVSTRKDSVPLTRSALMRRF
CCCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHH
NQSFPPFYSQFVSSEVQAQNLRLAYTLYQTRKAVVQVQDEGRKTVVCLAYRNRPSLLSDL
CCCCCHHHHHHHHHHHHHHCEEEEEHHHHHHHHHEEEECCCCEEEEEEEECCCCHHHHHH
FGVFTAFNLSVHGIHLYGQIYSPHLVFIRTIVSRDGHSLSSQTKLSLERAIHECLAGVFR
HHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
VHETLALEFDLKAGLKEAQVSFYFDPVFHLPTLLVDVDNQPGAFYRVMTALAQEDLTVVN
HHHHHEEEEEHHCCCCHHEEEEEECCHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEE
LNLMLRRKQTRFIFYLLGPDSTPTMPEFLGQKLALSIQQRLQGDPA
EEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA