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The map label for this gene is ccsB

Identifier: 86608115

GI number: 86608115

Start: 635936

End: 637345

Strand: Direct

Name: ccsB

Synonym: CYB_0626

Alternate gene names: 86608115

Gene position: 635936-637345 (Clockwise)

Preceding gene: 86608114

Following gene: 86608116

Centisome position: 20.87

GC content: 58.3

Gene sequence:

>1410_bases
ATGGTCATATACTCTCTCCCGCTTGCCCGCTGGGTTTCCTCGCTGCGGCGGTACTTTCGTCATGAGCTGCTGCCGCTGCT
GGCGGATCTGCGCCTGGCCATTGGCCTTTTGTTGGCAATTGCGGTCTTGAGCGCCACCGGCACGGTGATCGAGCAAGAGG
AAACGGCGGCTTTTTATCAGGCTCACTATCCAGAGCATCCGGCCCTGTTTGGCTTTCTCACCTGGCGGGTGATCCTGAGC
TTGGGATTGGATCACGTCTACCGCACCCCTTGGTTTCTGGCCATTTTGATCCTGTTCGGCAGCAGCCTTGCCGCCTGTTC
CCTGACGCGCCAATGGCCGATGTTGAAGAGGGCCCGCCGTTGGAGCTATCTCACCCGCCCGCAGTCTTTTCAGCGCCTGC
CGTTTCGGACGTATCTGCCTCAGCAATCTTTACAAGGTCTGCCGCAGCAGTTGCGTCGACAGGGCTATCTGGTGTTTCAG
GAGGGCCATTACCTCTACGCCCGCAAAGGGTTAATCGGCAGGATCGGCCCCATCTTGGTGCATGTCAGCATGCTGCTGAT
CTTGCTGGGGGCCATTTGGGGCAGCATTAGCGGCTTCAAGGCCCAAGAACTCATTCCCAGCGGCGGCGTGGCTTCCATTC
AACACTTGACCGGAGCAGGGGATCTGGCTCGCGCTCACTTGCCTACCTGGCAAATTCGGGCCAATCGCTTCTGGATTGAC
TACGCTGCCGATGGCCGGGTCAAGCAGTTTTATTCCGACCTCTCGATTTTGGATCAGGGTCAGGAGGTTAAACGTCAGAC
CATTTCCGTCAACCATCCTCTCTCCTACCGGGGTGTGACCCTTTACCAAGCCGATTGGAGCATCGACAGCATCCGCATCC
GCATCAACAACAGCCCCACTTTTCAAATCCCGGTGGTGCCGGTGCGTACCGAGGCAGGCAACAAACTCTGGGGCGCTTTT
GTGCCCACCCAGCCGGACATGAGCCAGGGACTCACGCTGCTGCTGCCGGATTTGCAGGGGACAGCCCTGCTCTACGACAC
TGAAGGGCAATGGATGGGATCCCTGCGCCAAGGCATGAGCTTGGCCCTCGACGAGGTCGCTCCCCAACGCTTCCCCAACC
CCCTCACTCTGTATCTGGATGAGGTGATCGGCGCTACCGGACTGCAAATTAAATCGGATCCAGGGATCCCTGCGGTGTAT
CTCGGATTTGGCCTGTTGATGGTGGGGGTGGTGATGAGCTACTTCAGCTACAGCCAAATCTGGGCTTTGCAAACGGAGAC
GGGGCTCTACTTGGGGGGCAAAACCAACCGGGCCTTGGTCACCTTCGAGCGAGAATTCGACCGCTTGGTGGAGCAACAAA
AGGTCGCCTTCTCTCTTTCCCAGATCCCGGTGGAAGCTGAGATTGGCTAG

Upstream 100 bases:

>100_bases
TGCTGCAGGCTAAGATGGGGCTACACCTACAGCACCCTGTTGGGGACTGCACCTTGCCTGGCAAGAGCAGCGGTCTGAAT
CTTGAGCCGACAAACTTCTC

Downstream 100 bases:

>100_bases
ACGCAGCTTTTTCCGGCGAAACCAGCCTCCTGCCCAATAGGGATCCCATGAGGTTGAAAGCCCTCATTTGATTTTCCTTG
CCACACCCTAAAGTTCTCTG

Product: cytochrome c-type biogenesis protein ResB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MVIYSLPLARWVSSLRRYFRHELLPLLADLRLAIGLLLAIAVLSATGTVIEQEETAAFYQAHYPEHPALFGFLTWRVILS
LGLDHVYRTPWFLAILILFGSSLAACSLTRQWPMLKRARRWSYLTRPQSFQRLPFRTYLPQQSLQGLPQQLRRQGYLVFQ
EGHYLYARKGLIGRIGPILVHVSMLLILLGAIWGSISGFKAQELIPSGGVASIQHLTGAGDLARAHLPTWQIRANRFWID
YAADGRVKQFYSDLSILDQGQEVKRQTISVNHPLSYRGVTLYQADWSIDSIRIRINNSPTFQIPVVPVRTEAGNKLWGAF
VPTQPDMSQGLTLLLPDLQGTALLYDTEGQWMGSLRQGMSLALDEVAPQRFPNPLTLYLDEVIGATGLQIKSDPGIPAVY
LGFGLLMVGVVMSYFSYSQIWALQTETGLYLGGKTNRALVTFEREFDRLVEQQKVAFSLSQIPVEAEIG

Sequences:

>Translated_469_residues
MVIYSLPLARWVSSLRRYFRHELLPLLADLRLAIGLLLAIAVLSATGTVIEQEETAAFYQAHYPEHPALFGFLTWRVILS
LGLDHVYRTPWFLAILILFGSSLAACSLTRQWPMLKRARRWSYLTRPQSFQRLPFRTYLPQQSLQGLPQQLRRQGYLVFQ
EGHYLYARKGLIGRIGPILVHVSMLLILLGAIWGSISGFKAQELIPSGGVASIQHLTGAGDLARAHLPTWQIRANRFWID
YAADGRVKQFYSDLSILDQGQEVKRQTISVNHPLSYRGVTLYQADWSIDSIRIRINNSPTFQIPVVPVRTEAGNKLWGAF
VPTQPDMSQGLTLLLPDLQGTALLYDTEGQWMGSLRQGMSLALDEVAPQRFPNPLTLYLDEVIGATGLQIKSDPGIPAVY
LGFGLLMVGVVMSYFSYSQIWALQTETGLYLGGKTNRALVTFEREFDRLVEQQKVAFSLSQIPVEAEIG
>Mature_469_residues
MVIYSLPLARWVSSLRRYFRHELLPLLADLRLAIGLLLAIAVLSATGTVIEQEETAAFYQAHYPEHPALFGFLTWRVILS
LGLDHVYRTPWFLAILILFGSSLAACSLTRQWPMLKRARRWSYLTRPQSFQRLPFRTYLPQQSLQGLPQQLRRQGYLVFQ
EGHYLYARKGLIGRIGPILVHVSMLLILLGAIWGSISGFKAQELIPSGGVASIQHLTGAGDLARAHLPTWQIRANRFWID
YAADGRVKQFYSDLSILDQGQEVKRQTISVNHPLSYRGVTLYQADWSIDSIRIRINNSPTFQIPVVPVRTEAGNKLWGAF
VPTQPDMSQGLTLLLPDLQGTALLYDTEGQWMGSLRQGMSLALDEVAPQRFPNPLTLYLDEVIGATGLQIKSDPGIPAVY
LGFGLLMVGVVMSYFSYSQIWALQTETGLYLGGKTNRALVTFEREFDRLVEQQKVAFSLSQIPVEAEIG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CCS1_SYNJB (Q2JNP5)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_476877.1
- STRING:   Q2JNP5
- GeneID:   3902446
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_0626
- TIGR:   CYB_0626
- eggNOG:   COG1333
- HOGENOM:   HBG635079
- OMA:   VKCECGH
- ProtClustDB:   CLSK893068
- BioCyc:   SSP321332:CYB_0626-MONOMER
- HAMAP:   MF_01392
- InterPro:   IPR007816

Pfam domain/function: PF05140 ResB

EC number: NA

Molecular weight: Translated: 52748; Mature: 52748

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11cc9ec0)-; HASH(0x126b1134)-; HASH(0x11e95b20)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIYSLPLARWVSSLRRYFRHELLPLLADLRLAIGLLLAIAVLSATGTVIEQEETAAFYQ
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHH
AHYPEHPALFGFLTWRVILSLGLDHVYRTPWFLAILILFGSSLAACSLTRQWPMLKRARR
HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
WSYLTRPQSFQRLPFRTYLPQQSLQGLPQQLRRQGYLVFQEGHYLYARKGLIGRIGPILV
HHHHCCCCHHHCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCEEEECCCCHHHHHHHHH
HVSMLLILLGAIWGSISGFKAQELIPSGGVASIQHLTGAGDLARAHLPTWQIRANRFWID
HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHCCCCCHHHHCCCCEEEEEEEEEEE
YAADGRVKQFYSDLSILDQGQEVKRQTISVNHPLSYRGVTLYQADWSIDSIRIRINNSPT
ECCCCHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCEEEEEECCCEEEEEEEECCCCE
FQIPVVPVRTEAGNKLWGAFVPTQPDMSQGLTLLLPDLQGTALLYDTEGQWMGSLRQGMS
EEEEEEEEEECCCCCEEEEECCCCCCHHCCCEEEEECCCCCEEEEECCCHHHHHHHHHHH
LALDEVAPQRFPNPLTLYLDEVIGATGLQIKSDPGIPAVYLGFGLLMVGVVMSYFSYSQI
HHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHE
WALQTETGLYLGGKTNRALVTFEREFDRLVEQQKVAFSLSQIPVEAEIG
EEEEECCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEECCH
>Mature Secondary Structure
MVIYSLPLARWVSSLRRYFRHELLPLLADLRLAIGLLLAIAVLSATGTVIEQEETAAFYQ
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHH
AHYPEHPALFGFLTWRVILSLGLDHVYRTPWFLAILILFGSSLAACSLTRQWPMLKRARR
HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
WSYLTRPQSFQRLPFRTYLPQQSLQGLPQQLRRQGYLVFQEGHYLYARKGLIGRIGPILV
HHHHCCCCHHHCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCEEEECCCCHHHHHHHHH
HVSMLLILLGAIWGSISGFKAQELIPSGGVASIQHLTGAGDLARAHLPTWQIRANRFWID
HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHCCCCCHHHHCCCCEEEEEEEEEEE
YAADGRVKQFYSDLSILDQGQEVKRQTISVNHPLSYRGVTLYQADWSIDSIRIRINNSPT
ECCCCHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCEEEEEECCCEEEEEEEECCCCE
FQIPVVPVRTEAGNKLWGAFVPTQPDMSQGLTLLLPDLQGTALLYDTEGQWMGSLRQGMS
EEEEEEEEEECCCCCEEEEECCCCCCHHCCCEEEEECCCCCEEEEECCCHHHHHHHHHHH
LALDEVAPQRFPNPLTLYLDEVIGATGLQIKSDPGIPAVYLGFGLLMVGVVMSYFSYSQI
HHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHE
WALQTETGLYLGGKTNRALVTFEREFDRLVEQQKVAFSLSQIPVEAEIG
EEEEECCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEECCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA