Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608066

Identifier: 86608066

GI number: 86608066

Start: 581587

End: 582180

Strand: Direct

Name: 86608066

Synonym: CYB_0574

Alternate gene names: NA

Gene position: 581587-582180 (Clockwise)

Preceding gene: 86608065

Following gene: 86608067

Centisome position: 19.09

GC content: 59.09

Gene sequence:

>594_bases
ATGGATGACCTTCACTCTTGGCCGGAGCGCATTGCCGATCGAGAAGGGGGTTACCTAACACCCGACGATCTGCAAGACCT
GATTCGCTACTCTCTCTCTTTTCAAGAACGGCTGGAGCTTTACCAGGTCTTACAACAGCAGGAGCTGACCTGGATCCAAA
AGGTTTTGCAACAGCAGGGGCCAACCCCCGTCGCGACAGCGTTGCCCAGCAGCAATCCCGCCAGAGAGGGGGCAGAACCT
TCTCTAACCCCGGCTCAGCGCCTCTTGGCTCGTCAATTGGCCTTTTGCTTGCGCTCCCTGGGCCTGAGCCTGTTGATAGG
GGATCCCACCCCTGTGCAGCAGGTAACTCTTGGTGCGATGGAACAGTACCTAGGGTTGCCGCAAGCGCTCGCTCAGCTAC
GGGCAGTGGTTCAGGGATCCCTGCCGGCGGATCAGCAGGGGTTGCTTGCCCCCTACTGGCAAGAGCTACAAGCTGTCTGC
GCCACTTCTCAGGCCCAGTTCCCTTCCCCCTCTTCTTCTAGGTCTGAGGCCGAGGTTGACCTGCCCACAGTTCCGCCGGA
GAGGGCTCTCACCTTGGCGGAAATGTTTGTGTGA

Upstream 100 bases:

>100_bases
GAGGATTTTGCCGCTTTGTTTGGCGGAGCTTTGCTCTAGCTCTGGTTTGTTCAGGGATCTCGGTTTTGTTTTGCCCTCTG
TTTTTAAGGAGACTTCACCC

Downstream 100 bases:

>100_bases
AGCCCACTGAAGGAGGCTCTATCTATGAATTCAAGGGTTGCCGAGCTGATGCACCAAAGTGAGGGCCGCTATCTGCGCCC
AGATGAGTTGAAAACTCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MDDLHSWPERIADREGGYLTPDDLQDLIRYSLSFQERLELYQVLQQQELTWIQKVLQQQGPTPVATALPSSNPAREGAEP
SLTPAQRLLARQLAFCLRSLGLSLLIGDPTPVQQVTLGAMEQYLGLPQALAQLRAVVQGSLPADQQGLLAPYWQELQAVC
ATSQAQFPSPSSSRSEAEVDLPTVPPERALTLAEMFV

Sequences:

>Translated_197_residues
MDDLHSWPERIADREGGYLTPDDLQDLIRYSLSFQERLELYQVLQQQELTWIQKVLQQQGPTPVATALPSSNPAREGAEP
SLTPAQRLLARQLAFCLRSLGLSLLIGDPTPVQQVTLGAMEQYLGLPQALAQLRAVVQGSLPADQQGLLAPYWQELQAVC
ATSQAQFPSPSSSRSEAEVDLPTVPPERALTLAEMFV
>Mature_197_residues
MDDLHSWPERIADREGGYLTPDDLQDLIRYSLSFQERLELYQVLQQQELTWIQKVLQQQGPTPVATALPSSNPAREGAEP
SLTPAQRLLARQLAFCLRSLGLSLLIGDPTPVQQVTLGAMEQYLGLPQALAQLRAVVQGSLPADQQGLLAPYWQELQAVC
ATSQAQFPSPSSSRSEAEVDLPTVPPERALTLAEMFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21690; Mature: 21690

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLHSWPERIADREGGYLTPDDLQDLIRYSLSFQERLELYQVLQQQELTWIQKVLQQQG
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTPVATALPSSNPAREGAEPSLTPAQRLLARQLAFCLRSLGLSLLIGDPTPVQQVTLGAM
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
EQYLGLPQALAQLRAVVQGSLPADQQGLLAPYWQELQAVCATSQAQFPSPSSSRSEAEVD
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LPTVPPERALTLAEMFV
CCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MDDLHSWPERIADREGGYLTPDDLQDLIRYSLSFQERLELYQVLQQQELTWIQKVLQQQG
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTPVATALPSSNPAREGAEPSLTPAQRLLARQLAFCLRSLGLSLLIGDPTPVQQVTLGAM
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
EQYLGLPQALAQLRAVVQGSLPADQQGLLAPYWQELQAVCATSQAQFPSPSSSRSEAEVD
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LPTVPPERALTLAEMFV
CCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA