| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607677
Identifier: 86607677
GI number: 86607677
Start: 188444
End: 189625
Strand: Reverse
Name: 86607677
Synonym: CYB_0176
Alternate gene names: NA
Gene position: 189625-188444 (Counterclockwise)
Preceding gene: 86607679
Following gene: 86607675
Centisome position: 6.22
GC content: 61.93
Gene sequence:
>1182_bases ATGAACGGGATCCCTGCTTGGGCCGGAGATGCTGCCGCCCTGAGCCTATTGGTTATGCAAGTGCCGATGCTGGCGGTGCT GCTGGCGCGGCTGCTGCCCTCTTTGCGGCGCCCTTCCCCTCTGCCTCCCGGTCAGCCTGGGATCCCTTTGCAGCCGGGCT TGGTCAGCGTGTTGTTGCCCACCCTCAACGAAGCCGAGCGCATCGATCCCTGCCTAGAAGGATTGCACCAACAGAGCTCC GTACTGCGGGAGGTGCTGGTGGTGGACAGCCGCTCTCAAGATGGCACCCCCGAAAAAGTGCTGCAGATGGCCAAGCGGGA TCCGCGCTTCCGTCTGGTAACCGACGATCCCTTGCCCAACGGATGGGTGGGGCGCCCCTGGGCCTTGCACTATGGATTTC TCCAGTCGGATCCGGCCTCTGAGTGGATCCTGGGCATTGATGCCGATACCCGTCCCCAGCCAGGATTGGTGGAGCGCCTG CTGGAAACTGCCCAGGCCCAAGGTCTGGATCTGATCACCCTGGCACCGCAGTTTATCCTGCAGCACTGGGGGGAAGGCTG GCTGCAGCCGGCTCTTTTGGTGACCCTGATCTACCGCTACGGGGCCGCCGGAGACACCGCCACCCTGCCGGAACGGACGA TGGCCAATGGGCAATGTATGCTAGTGCGCCGGTCGGTGCTGGAAGCGATGAATGGCTACACAGTGGCGCGGGCTTCATTT TGTGACGATGTGACCCTGGTGCGGCAGATTGCGGCAGCCGGCTTTAAAGTAGCTTTTTACGACGGTCGGCACCTGCTCAA GGTGCGCATGTACACTTCTTTTGGCGAAACTTGGCGAGAGTGGGGCCGATCCCTCGATTTGAAAGATGCCACCCCTGTGG CCCAGTTGTGGGGGGATATAGCTCTCCTCGTCCTCACCCAAGGGATCCCTGGGCCGGTGGTTGTAGGGCTGTTGGGCAAA GCCGGGATGGGGTTTCCCTTTTCCCTGACGGAGCAGGTGCTGCTGGGGCTTAACCTAGGCTTACTGATTCTGCGCTTAGG TGTACTGCTGGGCATTCGCGGCTCCTATCAGGATCCCCCTTGGACGTTCTGGATGTCGCCTCTGGCGGATCCCTTGGCCG TTCTGCGGATAATCCTATCTGCCCTCAGCCGGCCCCGCTCTTGGCGCGGGCGCACCTACTAG
Upstream 100 bases:
>100_bases TGATTTTGAATTGCTAAATCACCATGAGTATGAGTTTGTCCTCCCTGGGCTTCTCTTGCAAGCATTCTTGGACACTTTTC CCTTACAGGTTAGAACTGGC
Downstream 100 bases:
>100_bases GAGAGCCCTCAATCGGCTATTGCCTCGGGATCCACGCCCAACTCCCGCAATTTCGCGGCTAGGCGCTGCTGTTCCAGACG GGCCTGTTCGAGGGCTGCTT
Product: glycosyl transferase, group 2
Products: NA
Alternate protein names: Glycosyl Transferase; Hopene-Associated Glycosyltransferase HpnB; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase; Family 2 Glycosyl Transferase Protein; HpnB Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLPTLNEAERIDPCLEGLHQQSS VLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPNGWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERL LETAQAQGLDLITLAPQFILQHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDIALLVLTQGIPGPVVVGLLGK AGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPPWTFWMSPLADPLAVLRIILSALSRPRSWRGRTY
Sequences:
>Translated_393_residues MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLPTLNEAERIDPCLEGLHQQSS VLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPNGWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERL LETAQAQGLDLITLAPQFILQHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDIALLVLTQGIPGPVVVGLLGK AGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPPWTFWMSPLADPLAVLRIILSALSRPRSWRGRTY >Mature_393_residues MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLPTLNEAERIDPCLEGLHQQSS VLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPNGWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERL LETAQAQGLDLITLAPQFILQHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDIALLVLTQGIPGPVVVGLLGK AGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPPWTFWMSPLADPLAVLRIILSALSRPRSWRGRTY
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43137; Mature: 43137
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH TLNEAERIDPCLEGLHQQSSVLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPN HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC GWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERLLETAQAQGLDLITLAPQFIL CCCCCCHHEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHH QHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEHHHH CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDI HHHHHHHHHHHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH ALLVLTQGIPGPVVVGLLGKAGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPP HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC WTFWMSPLADPLAVLRIILSALSRPRSWRGRTY CEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH TLNEAERIDPCLEGLHQQSSVLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPN HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC GWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERLLETAQAQGLDLITLAPQFIL CCCCCCHHEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHH QHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEHHHH CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDI HHHHHHHHHHHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH ALLVLTQGIPGPVVVGLLGKAGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPP HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC WTFWMSPLADPLAVLRIILSALSRPRSWRGRTY CEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA