The gene/protein map for NC_011748 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86607677

Identifier: 86607677

GI number: 86607677

Start: 188444

End: 189625

Strand: Reverse

Name: 86607677

Synonym: CYB_0176

Alternate gene names: NA

Gene position: 189625-188444 (Counterclockwise)

Preceding gene: 86607679

Following gene: 86607675

Centisome position: 6.22

GC content: 61.93

Gene sequence:

>1182_bases
ATGAACGGGATCCCTGCTTGGGCCGGAGATGCTGCCGCCCTGAGCCTATTGGTTATGCAAGTGCCGATGCTGGCGGTGCT
GCTGGCGCGGCTGCTGCCCTCTTTGCGGCGCCCTTCCCCTCTGCCTCCCGGTCAGCCTGGGATCCCTTTGCAGCCGGGCT
TGGTCAGCGTGTTGTTGCCCACCCTCAACGAAGCCGAGCGCATCGATCCCTGCCTAGAAGGATTGCACCAACAGAGCTCC
GTACTGCGGGAGGTGCTGGTGGTGGACAGCCGCTCTCAAGATGGCACCCCCGAAAAAGTGCTGCAGATGGCCAAGCGGGA
TCCGCGCTTCCGTCTGGTAACCGACGATCCCTTGCCCAACGGATGGGTGGGGCGCCCCTGGGCCTTGCACTATGGATTTC
TCCAGTCGGATCCGGCCTCTGAGTGGATCCTGGGCATTGATGCCGATACCCGTCCCCAGCCAGGATTGGTGGAGCGCCTG
CTGGAAACTGCCCAGGCCCAAGGTCTGGATCTGATCACCCTGGCACCGCAGTTTATCCTGCAGCACTGGGGGGAAGGCTG
GCTGCAGCCGGCTCTTTTGGTGACCCTGATCTACCGCTACGGGGCCGCCGGAGACACCGCCACCCTGCCGGAACGGACGA
TGGCCAATGGGCAATGTATGCTAGTGCGCCGGTCGGTGCTGGAAGCGATGAATGGCTACACAGTGGCGCGGGCTTCATTT
TGTGACGATGTGACCCTGGTGCGGCAGATTGCGGCAGCCGGCTTTAAAGTAGCTTTTTACGACGGTCGGCACCTGCTCAA
GGTGCGCATGTACACTTCTTTTGGCGAAACTTGGCGAGAGTGGGGCCGATCCCTCGATTTGAAAGATGCCACCCCTGTGG
CCCAGTTGTGGGGGGATATAGCTCTCCTCGTCCTCACCCAAGGGATCCCTGGGCCGGTGGTTGTAGGGCTGTTGGGCAAA
GCCGGGATGGGGTTTCCCTTTTCCCTGACGGAGCAGGTGCTGCTGGGGCTTAACCTAGGCTTACTGATTCTGCGCTTAGG
TGTACTGCTGGGCATTCGCGGCTCCTATCAGGATCCCCCTTGGACGTTCTGGATGTCGCCTCTGGCGGATCCCTTGGCCG
TTCTGCGGATAATCCTATCTGCCCTCAGCCGGCCCCGCTCTTGGCGCGGGCGCACCTACTAG

Upstream 100 bases:

>100_bases
TGATTTTGAATTGCTAAATCACCATGAGTATGAGTTTGTCCTCCCTGGGCTTCTCTTGCAAGCATTCTTGGACACTTTTC
CCTTACAGGTTAGAACTGGC

Downstream 100 bases:

>100_bases
GAGAGCCCTCAATCGGCTATTGCCTCGGGATCCACGCCCAACTCCCGCAATTTCGCGGCTAGGCGCTGCTGTTCCAGACG
GGCCTGTTCGAGGGCTGCTT

Product: glycosyl transferase, group 2

Products: NA

Alternate protein names: Glycosyl Transferase; Hopene-Associated Glycosyltransferase HpnB; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase; Family 2 Glycosyl Transferase Protein; HpnB Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLPTLNEAERIDPCLEGLHQQSS
VLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPNGWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERL
LETAQAQGLDLITLAPQFILQHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF
CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDIALLVLTQGIPGPVVVGLLGK
AGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPPWTFWMSPLADPLAVLRIILSALSRPRSWRGRTY

Sequences:

>Translated_393_residues
MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLPTLNEAERIDPCLEGLHQQSS
VLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPNGWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERL
LETAQAQGLDLITLAPQFILQHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF
CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDIALLVLTQGIPGPVVVGLLGK
AGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPPWTFWMSPLADPLAVLRIILSALSRPRSWRGRTY
>Mature_393_residues
MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLPTLNEAERIDPCLEGLHQQSS
VLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPNGWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERL
LETAQAQGLDLITLAPQFILQHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF
CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDIALLVLTQGIPGPVVVGLLGK
AGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPPWTFWMSPLADPLAVLRIILSALSRPRSWRGRTY

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43137; Mature: 43137

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
TLNEAERIDPCLEGLHQQSSVLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
GWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERLLETAQAQGLDLITLAPQFIL
CCCCCCHHEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHH
QHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEHHHH
CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDI
HHHHHHHHHHHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
ALLVLTQGIPGPVVVGLLGKAGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPP
HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
WTFWMSPLADPLAVLRIILSALSRPRSWRGRTY
CEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNGIPAWAGDAAALSLLVMQVPMLAVLLARLLPSLRRPSPLPPGQPGIPLQPGLVSVLLP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
TLNEAERIDPCLEGLHQQSSVLREVLVVDSRSQDGTPEKVLQMAKRDPRFRLVTDDPLPN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
GWVGRPWALHYGFLQSDPASEWILGIDADTRPQPGLVERLLETAQAQGLDLITLAPQFIL
CCCCCCHHEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHH
QHWGEGWLQPALLVTLIYRYGAAGDTATLPERTMANGQCMLVRRSVLEAMNGYTVARASF
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEHHHH
CDDVTLVRQIAAAGFKVAFYDGRHLLKVRMYTSFGETWREWGRSLDLKDATPVAQLWGDI
HHHHHHHHHHHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
ALLVLTQGIPGPVVVGLLGKAGMGFPFSLTEQVLLGLNLGLLILRLGVLLGIRGSYQDPP
HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
WTFWMSPLADPLAVLRIILSALSRPRSWRGRTY
CEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA