Click here to switch to the map view.

The map label for this gene is potI [H]

Identifier: 86607633

GI number: 86607633

Start: 143786

End: 144610

Strand: Reverse

Name: potI [H]

Synonym: CYB_0130

Alternate gene names: 86607633

Gene position: 144610-143786 (Counterclockwise)

Preceding gene: 86607634

Following gene: 86607628

Centisome position: 4.75

GC content: 63.88

Gene sequence:

>825_bases
GTGAAAGGACGCAGATGGATTGGGGGATCCCTGCTCCGCCTTGGGGTGGCCGGAGTGGCCCTCCTTTGGGCTTTGCCCTT
TGGGGTGCTGGCCCTTTGGGCCTTCACGCGGGCCTGGTATTTTCCCGATGCCCTGCCCCGGGCATGGAGCATAGCCGGTT
GGCAGCAACTGCTGAGCTGGGGATCCCAGTTCCGGGCAGCCTTCGGCCAGAGCTTGCAAATTGCCCTGTTCACCACCCTG
CTGGCCCTGGGGGTGGGGATCCCGGCAGGGCGAGTTTTGGGCACCCGTCCCGTGCCTGCCTGGCTGCGCCTGCTGCTGCT
GTTGCCCGTCATCACCTCTCCTCTGGCTGTGCTGATGGGGATCCAAGGGGTGCTGATTCGCCTGCGGCTAGACGGTGCCC
TGCTGGGGGTGGTGCTGGTGCATCTGATCCCCACCATTCCCTACATGGCTCTGGTGATGGGCAGTGTGTTCGCCCGTTTC
GACCGCGGCTACGAGGCGCAGGCCCGCTGTTTGGGGGCGGATCCCTGGCAGGTGTGGTGGCAGGTGACGTTGCCCCTCAT
TGCCCCTGGGGCAGCCATTGGGGCGGTATTTGCCTTTTTGATCTCTTGGAACGAATTTTTGCTCACCTTCTTTGTCGGCG
GTGGGCGGGTTCTCACGCTGCCAATGCTGCTCTACAGCCTTTTGCAAGGGGGAAACAATACCCTGGTGGCTGCAGTGGCC
TTCCTGTCGCTGCTGCCGGGGTGGTTGGCCTTGCTGGGGGCCAGCGTCTGTTTGGGGCAGGCCATCGGGCTACCCCCCAC
AGAGGTTCAAGAGGGGGAGAGCTAA

Upstream 100 bases:

>100_bases
CGGCAGCGGTGGTCAGCCTAATCGGAGGGCTGTTTGCAGCCAGAGTATCCTTTCTGCAGCTGCCGTTTGGCTCAGCGGGA
CGGAGTCCTTGGAGAAAGCC

Downstream 100 bases:

>100_bases
TATCCCTTCAGGGCCAGGTTGGGCCGTTGCAGAGCAGCTCCCACCCGTTGAACCTGAGTTTTGAAGCTGCCATCTCGCTC
CAACCATATCTGCCTCAGGG

Product: ABC transporter, permease protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKGRRWIGGSLLRLGVAGVALLWALPFGVLALWAFTRAWYFPDALPRAWSIAGWQQLLSWGSQFRAAFGQSLQIALFTTL
LALGVGIPAGRVLGTRPVPAWLRLLLLLPVITSPLAVLMGIQGVLIRLRLDGALLGVVLVHLIPTIPYMALVMGSVFARF
DRGYEAQARCLGADPWQVWWQVTLPLIAPGAAIGAVFAFLISWNEFLLTFFVGGGRVLTLPMLLYSLLQGGNNTLVAAVA
FLSLLPGWLALLGASVCLGQAIGLPPTEVQEGES

Sequences:

>Translated_274_residues
MKGRRWIGGSLLRLGVAGVALLWALPFGVLALWAFTRAWYFPDALPRAWSIAGWQQLLSWGSQFRAAFGQSLQIALFTTL
LALGVGIPAGRVLGTRPVPAWLRLLLLLPVITSPLAVLMGIQGVLIRLRLDGALLGVVLVHLIPTIPYMALVMGSVFARF
DRGYEAQARCLGADPWQVWWQVTLPLIAPGAAIGAVFAFLISWNEFLLTFFVGGGRVLTLPMLLYSLLQGGNNTLVAAVA
FLSLLPGWLALLGASVCLGQAIGLPPTEVQEGES
>Mature_274_residues
MKGRRWIGGSLLRLGVAGVALLWALPFGVLALWAFTRAWYFPDALPRAWSIAGWQQLLSWGSQFRAAFGQSLQIALFTTL
LALGVGIPAGRVLGTRPVPAWLRLLLLLPVITSPLAVLMGIQGVLIRLRLDGALLGVVLVHLIPTIPYMALVMGSVFARF
DRGYEAQARCLGADPWQVWWQVTLPLIAPGAAIGAVFAFLISWNEFLLTFFVGGGRVLTLPMLLYSLLQGGNNTLVAAVA
FLSLLPGWLALLGASVCLGQAIGLPPTEVQEGES

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787081, Length=114, Percent_Identity=35.9649122807018, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29450; Mature: 29450

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]