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The map label for this gene is scpB

Identifier: 86607616

GI number: 86607616

Start: 128097

End: 128666

Strand: Reverse

Name: scpB

Synonym: CYB_0114

Alternate gene names: NA

Gene position: 128666-128097 (Counterclockwise)

Preceding gene: 86607617

Following gene: 86607612

Centisome position: 4.22

GC content: 56.32

Gene sequence:

>570_bases
ATGGCCCCGCGTCGTCTTACGTCGATTTCGGATCCCTTGTTGGCGGAAAGGCAAGGTCAGAGGGAGCGTGTCTTGGCCCT
GAAAAATCAGATCGAAGCGATCCTCTACTTAAAAGGGCAGCCCCTGGAGCTATCCGCCCTGGCCCAGTTGGCCCATTGCA
GTCGCGACGAAGCCTACGATGCGCTGCTGGAATTAATGGAAGACTATGCCCATCGAGATTCTGCCTTGGAGGTCTTACAG
GTGGAGGAGGGGTTTGCCCTGCAGTTGCGGGAGCCGTTTTTGGAGCTGGCCAACCAGCTTTTACCCCCTGAAATTGGGGT
GGGTGCTACCCGTACCCTGGCTACAATCATTCTGCGTGGCCCGCTCTCGCAGGCGGAGTTGGTGGAGTTGCGCGGCCAAG
GTGCTTATCAGCACGTGGCAGAGCTGGTAGAAAAAGGCTTCGTTACCCGCTATCGCAAAGAAGGCAGCCGTTCCCCCTGG
TTGCGGGTGACCGATAAGTTTCATCGCTACTTCATGGTAGATGAGCTGGCCAAAAAAGCAACAGAGGCGGCTTCTTTCCC
CGAAGAATAA

Upstream 100 bases:

>100_bases
GCTCGAAGGCGAGGATGGATCCGGCCCGCTTGGCCAAGGGATCCCTCAGCCTAGAACTGCTGCTATGCTACGGAGCAAGT
TGAGCGGATCCCTTGTTGCA

Downstream 100 bases:

>100_bases
ACTTTGAAGAATAAACTTTCCCCAACTGCAAAATGAGGGATCCCTAACTCCTCTCTCCCAAAGGGAAAGTGTCTCAATCT
GGCTTGAAATAAAAAAGGAT

Product: segregation and condensation protein B

Products: NA

Alternate protein names: Segregation And Condensation Protein B; Condensin Subunit ScpB; Transcriptional Regulator; Transcription Regulator; YpuH-Like Family Transcriptional Regulator; Chromosome Segregation/Condensation Protein B; Transcription Regulator YpuH-Like Family; Transcriptional Regulator Containing HTH Domain

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MAPRRLTSISDPLLAERQGQRERVLALKNQIEAILYLKGQPLELSALAQLAHCSRDEAYDALLELMEDYAHRDSALEVLQ
VEEGFALQLREPFLELANQLLPPEIGVGATRTLATIILRGPLSQAELVELRGQGAYQHVAELVEKGFVTRYRKEGSRSPW
LRVTDKFHRYFMVDELAKKATEAASFPEE

Sequences:

>Translated_189_residues
MAPRRLTSISDPLLAERQGQRERVLALKNQIEAILYLKGQPLELSALAQLAHCSRDEAYDALLELMEDYAHRDSALEVLQ
VEEGFALQLREPFLELANQLLPPEIGVGATRTLATIILRGPLSQAELVELRGQGAYQHVAELVEKGFVTRYRKEGSRSPW
LRVTDKFHRYFMVDELAKKATEAASFPEE
>Mature_188_residues
APRRLTSISDPLLAERQGQRERVLALKNQIEAILYLKGQPLELSALAQLAHCSRDEAYDALLELMEDYAHRDSALEVLQV
EEGFALQLREPFLELANQLLPPEIGVGATRTLATIILRGPLSQAELVELRGQGAYQHVAELVEKGFVTRYRKEGSRSPWL
RVTDKFHRYFMVDELAKKATEAASFPEE

Specific function: Unknown

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21357; Mature: 21226

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRRLTSISDPLLAERQGQRERVLALKNQIEAILYLKGQPLELSALAQLAHCSRDEAYD
CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCHHHHH
ALLELMEDYAHRDSALEVLQVEEGFALQLREPFLELANQLLPPEIGVGATRTLATIILRG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
PLSQAELVELRGQGAYQHVAELVEKGFVTRYRKEGSRSPWLRVTDKFHRYFMVDELAKKA
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TEAASFPEE
HHHCCCCCC
>Mature Secondary Structure 
APRRLTSISDPLLAERQGQRERVLALKNQIEAILYLKGQPLELSALAQLAHCSRDEAYD
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCHHHHH
ALLELMEDYAHRDSALEVLQVEEGFALQLREPFLELANQLLPPEIGVGATRTLATIILRG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
PLSQAELVELRGQGAYQHVAELVEKGFVTRYRKEGSRSPWLRVTDKFHRYFMVDELAKKA
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TEAASFPEE
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA