| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607603
Identifier: 86607603
GI number: 86607603
Start: 117452
End: 118333
Strand: Reverse
Name: 86607603
Synonym: CYB_0101
Alternate gene names: NA
Gene position: 118333-117452 (Counterclockwise)
Preceding gene: 86607604
Following gene: 86607602
Centisome position: 3.88
GC content: 60.77
Gene sequence:
>882_bases ATGGTTTGGCCAACGCTGCAAGTCCCGCAGGTGCTGCTGTTTGTGGAGGCGGCCAGCCTGTTGCAGGACTCTAGCCAGGT TTTGTTGCAGGCCGGTCGGGCAACGGCGGATTTGCCGGAGTTGATCGCAGAAGCACAGGCGCGGGCCGAAGCCCAGGTGC AGCTCCTTGGGATCCCCGCAGACTTGCGGGCACAGGTGCGAGGGATCCTCAGGTTGACCTCGCCCCAAGAGGTGCTGGCC TACTTGCAGGACTTGCTGGACAGGGGATCTGGCCCGGATTTGGAAGCCTTTTTGGAGCAGGCGGGATCTGCCTCTACGGT GCTGCGCTTCCCCCCCCTGTTGGTGGGGGCTGTGGCTCTGGAGGTGGTGCTGGAGCGGTTGGACTTTTCCCCAGAAGAGC GGGCTGTGGTGCAAGCCCAACGGGATCAATGGGAACAGGCCCTGGCGGAATTGGCCATCCACCACAGGGTTTCCCCAGAG CCGCTGCAGGCTGCTGCCGAGACGGTGCTGCGGGCGGCTTCAGCAGAGGAGCTGCTGCAACTGGGTCAGGATCTTTTTCA AGATCTCCAAGATCTCGCTGTTGCTGATTCTGAGCCAGAAGCCGAGCCCCAGGTGGAATTGGCGGGGCCTCTGCTGTTCA TGATGGTGGCCGATCACCTGTTGGCCCAAACAGAGTATCCGCTGACCCCGGAGCAGCGGCTGGACTTGCAAACCAATCGC GCCGAGGCAGAAACCCGCTACTTGGCCATGCAAAAGTTGGGCCGCATTGAAAACTTGGCGGAGCAGCAGGCTTATATTCG ATCCTGGATTGACCAAGCTTCCGTACCGGATTTGCTGCAGGCTTTGGATCGCCTTTTTGCGGCGTCTGAACCCAACTCAT GA
Upstream 100 bases:
>100_bases CTGATCGGTCTGCACTGGCACAAGCCCACTTCAGCTCACCCCGCTGCGCCAGCCAATCCAGAATCGGAGGGATCCCCTGC GGATCCACAGCTTGGCTAGC
Downstream 100 bases:
>100_bases GGCTCAGGGATCGCCGAAGATTTTGGATCCCCTATCCTGGAAGCAAAGGGATCCCACTTGAGGTGCGAAAGTGGACTGGG GCAGCCTGTTCTGGATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVWPTLQVPQVLLFVEAASLLQDSSQVLLQAGRATADLPELIAEAQARAEAQVQLLGIPADLRAQVRGILRLTSPQEVLA YLQDLLDRGSGPDLEAFLEQAGSASTVLRFPPLLVGAVALEVVLERLDFSPEERAVVQAQRDQWEQALAELAIHHRVSPE PLQAAAETVLRAASAEELLQLGQDLFQDLQDLAVADSEPEAEPQVELAGPLLFMMVADHLLAQTEYPLTPEQRLDLQTNR AEAETRYLAMQKLGRIENLAEQQAYIRSWIDQASVPDLLQALDRLFAASEPNS
Sequences:
>Translated_293_residues MVWPTLQVPQVLLFVEAASLLQDSSQVLLQAGRATADLPELIAEAQARAEAQVQLLGIPADLRAQVRGILRLTSPQEVLA YLQDLLDRGSGPDLEAFLEQAGSASTVLRFPPLLVGAVALEVVLERLDFSPEERAVVQAQRDQWEQALAELAIHHRVSPE PLQAAAETVLRAASAEELLQLGQDLFQDLQDLAVADSEPEAEPQVELAGPLLFMMVADHLLAQTEYPLTPEQRLDLQTNR AEAETRYLAMQKLGRIENLAEQQAYIRSWIDQASVPDLLQALDRLFAASEPNS >Mature_293_residues MVWPTLQVPQVLLFVEAASLLQDSSQVLLQAGRATADLPELIAEAQARAEAQVQLLGIPADLRAQVRGILRLTSPQEVLA YLQDLLDRGSGPDLEAFLEQAGSASTVLRFPPLLVGAVALEVVLERLDFSPEERAVVQAQRDQWEQALAELAIHHRVSPE PLQAAAETVLRAASAEELLQLGQDLFQDLQDLAVADSEPEAEPQVELAGPLLFMMVADHLLAQTEYPLTPEQRLDLQTNR AEAETRYLAMQKLGRIENLAEQQAYIRSWIDQASVPDLLQALDRLFAASEPNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32201; Mature: 32201
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWPTLQVPQVLLFVEAASLLQDSSQVLLQAGRATADLPELIAEAQARAEAQVQLLGIPA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCH DLRAQVRGILRLTSPQEVLAYLQDLLDRGSGPDLEAFLEQAGSASTVLRFPPLLVGAVAL HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH EVVLERLDFSPEERAVVQAQRDQWEQALAELAIHHRVSPEPLQAAAETVLRAASAEELLQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH LGQDLFQDLQDLAVADSEPEAEPQVELAGPLLFMMVADHLLAQTEYPLTPEQRLDLQTNR HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHH AEAETRYLAMQKLGRIENLAEQQAYIRSWIDQASVPDLLQALDRLFAASEPNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVWPTLQVPQVLLFVEAASLLQDSSQVLLQAGRATADLPELIAEAQARAEAQVQLLGIPA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCH DLRAQVRGILRLTSPQEVLAYLQDLLDRGSGPDLEAFLEQAGSASTVLRFPPLLVGAVAL HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH EVVLERLDFSPEERAVVQAQRDQWEQALAELAIHHRVSPEPLQAAAETVLRAASAEELLQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH LGQDLFQDLQDLAVADSEPEAEPQVELAGPLLFMMVADHLLAQTEYPLTPEQRLDLQTNR HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHH AEAETRYLAMQKLGRIENLAEQQAYIRSWIDQASVPDLLQALDRLFAASEPNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA