| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607596
Identifier: 86607596
GI number: 86607596
Start: 110017
End: 110670
Strand: Reverse
Name: 86607596
Synonym: CYB_0094
Alternate gene names: NA
Gene position: 110670-110017 (Counterclockwise)
Preceding gene: 86607600
Following gene: 86607595
Centisome position: 3.63
GC content: 57.95
Gene sequence:
>654_bases ATGATCGCCACTCAAGTCTCTGCCCAAGAGTTGTTTCGGGCCGCCTATGAAAACCGCTACACCTGGGATCCCGCTTTCCC GGGCTACAGCGCCGAGGTCACCTATTGGGATGGGGAGCGCACATTCGTTGGGCAGGTGCGAGTGGGGGCAGACCTAAAGG CCACCGTTACGGGCGTAGAAGATGAGGAAGCTCGAAAAGCCATTCACAACCAACTCTGGGAGATTGCCATTCACCGGGTG CGCCGCAGCTTCGACGAGACCCATGGGAACAACACCTTCCGTTACGGCCAAACCCTGCCCGATGGCACAGTAGAGATCCT GGTGGGGGGCAAAGCCGAAGGGGATCGCTACCACGTGCGCGATAACCAGGTTACCATGGTGCATCGGCATATCCACGGAG TGGTGGTTACCATCCACACCTTCAGCAGCCACGATACCGGCGAAGGCTATCTTTCCCACCGCTACGATTCCGTCTATCAC GATCCCCAAACGGGCGAGCAAAAAGGCGGGCGCAGCCAATTCGAGGATCTGTATACAAAAGTGGGCAAGTATTACATCCT CTCGGAGCGGCGTATCCAGACGGAGACGGAAACCGGCCCTGTGGAGAAGCGCTTCACCTTCAGCAACTTGACCTTGCTGG ACACTGGGGCGTGA
Upstream 100 bases:
>100_bases GCTCTCAGCGAAGGCAACTGGGGGGCAGCCCAACAGCAGGGGGCGGTATGATGGATGCTCAGGGGAAGTGCTTGCAAGGA AAACAGGAAGGAGACAGCCG
Downstream 100 bases:
>100_bases GCGACCCGGCATTGACCCCAGCAGGGTAGGGGGCCAGCTCTCCCGTTCGTCACTGTTGGGCAGCTACCGGGAGGCTGAGT TCACGCCCTTCTTGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MIATQVSAQELFRAAYENRYTWDPAFPGYSAEVTYWDGERTFVGQVRVGADLKATVTGVEDEEARKAIHNQLWEIAIHRV RRSFDETHGNNTFRYGQTLPDGTVEILVGGKAEGDRYHVRDNQVTMVHRHIHGVVVTIHTFSSHDTGEGYLSHRYDSVYH DPQTGEQKGGRSQFEDLYTKVGKYYILSERRIQTETETGPVEKRFTFSNLTLLDTGA
Sequences:
>Translated_217_residues MIATQVSAQELFRAAYENRYTWDPAFPGYSAEVTYWDGERTFVGQVRVGADLKATVTGVEDEEARKAIHNQLWEIAIHRV RRSFDETHGNNTFRYGQTLPDGTVEILVGGKAEGDRYHVRDNQVTMVHRHIHGVVVTIHTFSSHDTGEGYLSHRYDSVYH DPQTGEQKGGRSQFEDLYTKVGKYYILSERRIQTETETGPVEKRFTFSNLTLLDTGA >Mature_217_residues MIATQVSAQELFRAAYENRYTWDPAFPGYSAEVTYWDGERTFVGQVRVGADLKATVTGVEDEEARKAIHNQLWEIAIHRV RRSFDETHGNNTFRYGQTLPDGTVEILVGGKAEGDRYHVRDNQVTMVHRHIHGVVVTIHTFSSHDTGEGYLSHRYDSVYH DPQTGEQKGGRSQFEDLYTKVGKYYILSERRIQTETETGPVEKRFTFSNLTLLDTGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24762; Mature: 24762
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATQVSAQELFRAAYENRYTWDPAFPGYSAEVTYWDGERTFVGQVRVGADLKATVTGVE CCCCCCCHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEECCC DEEARKAIHNQLWEIAIHRVRRSFDETHGNNTFRYGQTLPDGTVEILVGGKAEGDRYHVR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEC DNQVTMVHRHIHGVVVTIHTFSSHDTGEGYLSHRYDSVYHDPQTGEQKGGRSQFEDLYTK CCCEEEEEEEECEEEEEEEECCCCCCCCCHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHH VGKYYILSERRIQTETETGPVEKRFTFSNLTLLDTGA HCCEEEEECCEECCCCCCCCCCEEEEECCEEEEECCC >Mature Secondary Structure MIATQVSAQELFRAAYENRYTWDPAFPGYSAEVTYWDGERTFVGQVRVGADLKATVTGVE CCCCCCCHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEECCC DEEARKAIHNQLWEIAIHRVRRSFDETHGNNTFRYGQTLPDGTVEILVGGKAEGDRYHVR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEC DNQVTMVHRHIHGVVVTIHTFSSHDTGEGYLSHRYDSVYHDPQTGEQKGGRSQFEDLYTK CCCEEEEEEEECEEEEEEEECCCCCCCCCHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHH VGKYYILSERRIQTETETGPVEKRFTFSNLTLLDTGA HCCEEEEECCEECCCCCCCCCCEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA