| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86607594
Identifier: 86607594
GI number: 86607594
Start: 107841
End: 108458
Strand: Reverse
Name: 86607594
Synonym: CYB_0092
Alternate gene names: NA
Gene position: 108458-107841 (Counterclockwise)
Preceding gene: 86607595
Following gene: 86607593
Centisome position: 3.56
GC content: 59.22
Gene sequence:
>618_bases ATGAAAGACCCGAAGGGCAATTCTACTGCGGATCCCTCTTGGCGGGCGCTGATTCAGGCGGCACTGCACCGTAACCGTAG CGATCCCAGTGTGCGGTATTTGCAATTGGCCACGGTGGATCCCCAGGGGCATCCGCGCAACCGCACGGTCGTTTTCCGGG GGTTTTTGGGCGATACCGACCGCATTCAATTGGCGGTGGATAGTCGCAGCGAGAAGATCCGACAAATTGCCCACTGCCCC CAAGCCCAGATCTGCTGGTATTTCTGCAAAACCCGCGAGCAATTCCGCATCGCTGGCACCCTTGAGGCCATCGCCGCGGA TCATCCGGATCCCCAAGCCCAGCGCCAGCGGCAGCAGTTGTGGCAACAGATATCGGAAAAAGGACGGCTCCTCTGGTTTT GGCCGGAACCCAAAGGGCCGCTCGCCCCGCCAGAGGCTTTTATCCAGGAGTTGCCCAAAGAGAAAGATCTGCTGCCTCCG CAGACCTTTGTGGCTTTACTGCTGGAGCCAACGGAGGTGGATCACCTACAGCTTAAGGGGGATCAGATCTATCCCCAATT GCGGACGGTGTACGAGCGCACTTCCAAAGGGTGGCAGCGTCGGGCCGTGAATCCCTGA
Upstream 100 bases:
>100_bases TCTCCAGAGACTCCCAATCTGAGGCTTCTCCACCCCCTAGCTGATCGCGTCAGGGAGAGAAAACCCCAATCCCGGCTTGC TTGCACCTTGCGAAAAACGG
Downstream 100 bases:
>100_bases AGGCGATCCAAACTTGCTTAGCCTGGTCTGGAGTGGGGGATCCCTTATTCCTTGTTCCTCCAAAGCACAGGGAATAGAGG AATGGACGTGTTAACGTAGC
Product: pyridoxamine 5'-phosphate oxidase family protein
Products: NA
Alternate protein names: Pyridoxamine Phosphate Oxidase
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKDPKGNSTADPSWRALIQAALHRNRSDPSVRYLQLATVDPQGHPRNRTVVFRGFLGDTDRIQLAVDSRSEKIRQIAHCP QAQICWYFCKTREQFRIAGTLEAIAADHPDPQAQRQRQQLWQQISEKGRLLWFWPEPKGPLAPPEAFIQELPKEKDLLPP QTFVALLLEPTEVDHLQLKGDQIYPQLRTVYERTSKGWQRRAVNP
Sequences:
>Translated_205_residues MKDPKGNSTADPSWRALIQAALHRNRSDPSVRYLQLATVDPQGHPRNRTVVFRGFLGDTDRIQLAVDSRSEKIRQIAHCP QAQICWYFCKTREQFRIAGTLEAIAADHPDPQAQRQRQQLWQQISEKGRLLWFWPEPKGPLAPPEAFIQELPKEKDLLPP QTFVALLLEPTEVDHLQLKGDQIYPQLRTVYERTSKGWQRRAVNP >Mature_205_residues MKDPKGNSTADPSWRALIQAALHRNRSDPSVRYLQLATVDPQGHPRNRTVVFRGFLGDTDRIQLAVDSRSEKIRQIAHCP QAQICWYFCKTREQFRIAGTLEAIAADHPDPQAQRQRQQLWQQISEKGRLLWFWPEPKGPLAPPEAFIQELPKEKDLLPP QTFVALLLEPTEVDHLQLKGDQIYPQLRTVYERTSKGWQRRAVNP
Specific function: Unknown
COG id: COG5135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23704; Mature: 23704
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDPKGNSTADPSWRALIQAALHRNRSDPSVRYLQLATVDPQGHPRNRTVVFRGFLGDTD CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCC RIQLAVDSRSEKIRQIAHCPQAQICWYFCKTREQFRIAGTLEAIAADHPDPQAQRQRQQL EEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHH WQQISEKGRLLWFWPEPKGPLAPPEAFIQELPKEKDLLPPQTFVALLLEPTEVDHLQLKG HHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEECC DQIYPQLRTVYERTSKGWQRRAVNP CHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKDPKGNSTADPSWRALIQAALHRNRSDPSVRYLQLATVDPQGHPRNRTVVFRGFLGDTD CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCC RIQLAVDSRSEKIRQIAHCPQAQICWYFCKTREQFRIAGTLEAIAADHPDPQAQRQRQQL EEEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHH WQQISEKGRLLWFWPEPKGPLAPPEAFIQELPKEKDLLPPQTFVALLLEPTEVDHLQLKG HHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEECC DQIYPQLRTVYERTSKGWQRRAVNP CHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA