| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607570
Identifier: 86607570
GI number: 86607570
Start: 79887
End: 81374
Strand: Reverse
Name: 86607570
Synonym: CYB_0068
Alternate gene names: NA
Gene position: 81374-79887 (Counterclockwise)
Preceding gene: 86607579
Following gene: 86607569
Centisome position: 2.67
GC content: 63.04
Gene sequence:
>1488_bases GTGGGGAAGCCTGCCGATCCCGAGAGCAAAGTGGAGTCTTTTAAGGGCTGCTTCCTACCGCTATTGAGCGCTACGGCTAT GGCTCGCCGCAACACCCTACAAGATGACCTCAACTACCAACAAGCCAAGCGCAGCCTGCGCCAGTGGGTGGCCCAACTGG ATCTGCGCCCCCAAGAGGTCGCGGGCTTAGAAGGGGAGTTGGAGAGCTTGCAAGCGCTCTTGGACAAGCTGGAAACCGAG GTCATCCACATCGCCGCCTTTGGTCTGGTGGGGCGAGGCAAGTCTTCCCTGCTCAATGCCCTGCTGGGCGAGCCAGTCTT TGAGACGGGGCCCACCCATGGCATCACCCGTACCCAGCAAGCGGCAACTTGGAACATCAGCTGGGAAACCCGCCCCCAGT CCTCCTTCTCTGGCACATCCCTGAAGGGATCCCGCCTCCCCCCTTCCTCGGTGCAGTCGGTACAGGTCGCCCATTGGCAG GGATCCCGTCTGGAGCTGATCGACACTCCCGGCCTGGATGAAGTAGACGGCGAAGAGCGGGCGCGGCTGGCCCGAGAAGT GGCCCAGCGAGCGGATCTGATCCTGTTTGTCGTCTGCGGGGATCTGACGCGGGTGGAGTTTGAGGCTCTGGCCACCCTGC GGGAGGCGGGCAAGCCTATGCTGCTGGTGTTCAACAAGATCGACCAGTACCCAGAGGCAGATCGCCAGGCCATCTACGAC AAGATCCGCAACGAACGGGTGCGGCAGCTCCTTTCTCCCAACGAGATCGTCATGGTGGCGGCCTCCCCTCGCGTGCCCCG CCTGGTGCAAAGGCCGGATGGGAGCTTTGCTGCCCAGATGGAAGTGGGATCCCCGCAGGTGGATGAGCTGCGCCTGAAAA TCCTGGAAGTCCTGCATCGGGAGGGGCGTTCGCTGCTGGCCTTGAATGCCCTCCTGTTTGCCGATCGGGTTAACCAGCAG GTAATTGAGCGCAAGCTGCAAACCCGTGCCCAGCAAGCCCAAGATCTGATCGCCTCAGCCGCCCGCACTAAAGCGCTGGC GGTTGCCCTCAACCCCATCACCCTGCTCGATACCTTGGGAGGGCTGGCCATCGATGTCACCCTGATCCTGCGCCTGGCCC GCCTGTACGGCTGGCCCATGAGCACTGCGGGAGCCACACAACTGCTGCAGAAGATCATCCTCAGCATGCTCAGCCTGGGC GCCGGCGAGTGGGTGGCGCTGTTGGGCCTGGGATCCCTGAAAACCTTGCTGGGGGGATTCTCTCTGGGAGCCTACGGTTC CGTGGCCCTGACGCAGGCGGTGTTGGCCGGGTTTTCCTGCTATGCCATCGGCGAGTCCGCCCGCCGCTACCTGGCCCAGG GAGCCAGTTGGGGGCCAGAGGGCCCCAAAGCCGCCATAGCCCAGATTTTGGCCGATTTGGACGAAGCCTCGATCACCGCC CGCCTGCGGGAGGAAATCCGCCACAAAATCGGATTTGCTTTCCCCTGA
Upstream 100 bases:
>100_bases CGGCGGCTGAGGCCGCCTTGCTTTGAGCTTAACTCTTCCCTTCCTCTTATGATCGTCTTGTATTGTCCCTTGTATTGTCC GATGAGAAGCTCTCTGTCCG
Downstream 100 bases:
>100_bases ACCTCTACAATCGCCTCTACAATCAGAGAGCCGAGCCGCATCGTTCGCATGACCTACTGCCTTGGCATCATCACCCGCTT TGGCTTGGTGATGGCGGCAG
Product: GTP-binding protein
Products: NA
Alternate protein names: GTPase SAR1 And Related Small G Proteins; Membrane Associated GTPase; GTPase SAR1 And Related Small G Protein
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MGKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETE VIHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQ GSRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYD KIRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQ VIERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLGGLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLG AGEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITA RLREEIRHKIGFAFP
Sequences:
>Translated_495_residues MGKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETE VIHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQ GSRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYD KIRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQ VIERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLGGLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLG AGEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITA RLREEIRHKIGFAFP >Mature_494_residues GKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEV IHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQG SRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYDK IRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQV IERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLGGLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLGA GEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITAR LREEIRHKIGFAFP
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53948; Mature: 53817
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH AGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC AATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEER CEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCEEEECCCCCCCCCCHHH ARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYD HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHH KIRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHR HHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH EGRSLLALNALLFADRVNQQVIERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHC GLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLGAGEWVALLGLGSLKTLLGGF CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCC SLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITA CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RLREEIRHKIGFAFP HHHHHHHHHCCCCCC >Mature Secondary Structure GKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH AGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC AATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEER CEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCEEEECCCCCCCCCCHHH ARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYD HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHH KIRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHR HHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH EGRSLLALNALLFADRVNQQVIERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHC GLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLGAGEWVALLGLGSLKTLLGGF CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCC SLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITA CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RLREEIRHKIGFAFP HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA