Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607570

Identifier: 86607570

GI number: 86607570

Start: 79887

End: 81374

Strand: Reverse

Name: 86607570

Synonym: CYB_0068

Alternate gene names: NA

Gene position: 81374-79887 (Counterclockwise)

Preceding gene: 86607579

Following gene: 86607569

Centisome position: 2.67

GC content: 63.04

Gene sequence:

>1488_bases
GTGGGGAAGCCTGCCGATCCCGAGAGCAAAGTGGAGTCTTTTAAGGGCTGCTTCCTACCGCTATTGAGCGCTACGGCTAT
GGCTCGCCGCAACACCCTACAAGATGACCTCAACTACCAACAAGCCAAGCGCAGCCTGCGCCAGTGGGTGGCCCAACTGG
ATCTGCGCCCCCAAGAGGTCGCGGGCTTAGAAGGGGAGTTGGAGAGCTTGCAAGCGCTCTTGGACAAGCTGGAAACCGAG
GTCATCCACATCGCCGCCTTTGGTCTGGTGGGGCGAGGCAAGTCTTCCCTGCTCAATGCCCTGCTGGGCGAGCCAGTCTT
TGAGACGGGGCCCACCCATGGCATCACCCGTACCCAGCAAGCGGCAACTTGGAACATCAGCTGGGAAACCCGCCCCCAGT
CCTCCTTCTCTGGCACATCCCTGAAGGGATCCCGCCTCCCCCCTTCCTCGGTGCAGTCGGTACAGGTCGCCCATTGGCAG
GGATCCCGTCTGGAGCTGATCGACACTCCCGGCCTGGATGAAGTAGACGGCGAAGAGCGGGCGCGGCTGGCCCGAGAAGT
GGCCCAGCGAGCGGATCTGATCCTGTTTGTCGTCTGCGGGGATCTGACGCGGGTGGAGTTTGAGGCTCTGGCCACCCTGC
GGGAGGCGGGCAAGCCTATGCTGCTGGTGTTCAACAAGATCGACCAGTACCCAGAGGCAGATCGCCAGGCCATCTACGAC
AAGATCCGCAACGAACGGGTGCGGCAGCTCCTTTCTCCCAACGAGATCGTCATGGTGGCGGCCTCCCCTCGCGTGCCCCG
CCTGGTGCAAAGGCCGGATGGGAGCTTTGCTGCCCAGATGGAAGTGGGATCCCCGCAGGTGGATGAGCTGCGCCTGAAAA
TCCTGGAAGTCCTGCATCGGGAGGGGCGTTCGCTGCTGGCCTTGAATGCCCTCCTGTTTGCCGATCGGGTTAACCAGCAG
GTAATTGAGCGCAAGCTGCAAACCCGTGCCCAGCAAGCCCAAGATCTGATCGCCTCAGCCGCCCGCACTAAAGCGCTGGC
GGTTGCCCTCAACCCCATCACCCTGCTCGATACCTTGGGAGGGCTGGCCATCGATGTCACCCTGATCCTGCGCCTGGCCC
GCCTGTACGGCTGGCCCATGAGCACTGCGGGAGCCACACAACTGCTGCAGAAGATCATCCTCAGCATGCTCAGCCTGGGC
GCCGGCGAGTGGGTGGCGCTGTTGGGCCTGGGATCCCTGAAAACCTTGCTGGGGGGATTCTCTCTGGGAGCCTACGGTTC
CGTGGCCCTGACGCAGGCGGTGTTGGCCGGGTTTTCCTGCTATGCCATCGGCGAGTCCGCCCGCCGCTACCTGGCCCAGG
GAGCCAGTTGGGGGCCAGAGGGCCCCAAAGCCGCCATAGCCCAGATTTTGGCCGATTTGGACGAAGCCTCGATCACCGCC
CGCCTGCGGGAGGAAATCCGCCACAAAATCGGATTTGCTTTCCCCTGA

Upstream 100 bases:

>100_bases
CGGCGGCTGAGGCCGCCTTGCTTTGAGCTTAACTCTTCCCTTCCTCTTATGATCGTCTTGTATTGTCCCTTGTATTGTCC
GATGAGAAGCTCTCTGTCCG

Downstream 100 bases:

>100_bases
ACCTCTACAATCGCCTCTACAATCAGAGAGCCGAGCCGCATCGTTCGCATGACCTACTGCCTTGGCATCATCACCCGCTT
TGGCTTGGTGATGGCGGCAG

Product: GTP-binding protein

Products: NA

Alternate protein names: GTPase SAR1 And Related Small G Proteins; Membrane Associated GTPase; GTPase SAR1 And Related Small G Protein

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MGKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETE
VIHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQ
GSRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYD
KIRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQ
VIERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLGGLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLG
AGEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITA
RLREEIRHKIGFAFP

Sequences:

>Translated_495_residues
MGKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETE
VIHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQ
GSRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYD
KIRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQ
VIERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLGGLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLG
AGEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITA
RLREEIRHKIGFAFP
>Mature_494_residues
GKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEVAGLEGELESLQALLDKLETEV
IHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQAATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQG
SRLELIDTPGLDEVDGEERARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYDK
IRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHREGRSLLALNALLFADRVNQQV
IERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLGGLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLGA
GEWVALLGLGSLKTLLGGFSLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITAR
LREEIRHKIGFAFP

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53948; Mature: 53817

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH
AGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
AATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEER
CEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCEEEECCCCCCCCCCHHH
ARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYD
HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHH
KIRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHR
HHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
EGRSLLALNALLFADRVNQQVIERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHC
GLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLGAGEWVALLGLGSLKTLLGGF
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCC
SLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLREEIRHKIGFAFP
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
GKPADPESKVESFKGCFLPLLSATAMARRNTLQDDLNYQQAKRSLRQWVAQLDLRPQEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH
AGLEGELESLQALLDKLETEVIHIAAFGLVGRGKSSLLNALLGEPVFETGPTHGITRTQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
AATWNISWETRPQSSFSGTSLKGSRLPPSSVQSVQVAHWQGSRLELIDTPGLDEVDGEER
CEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCEEEECCCCCCCCCCHHH
ARLAREVAQRADLILFVVCGDLTRVEFEALATLREAGKPMLLVFNKIDQYPEADRQAIYD
HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHH
KIRNERVRQLLSPNEIVMVAASPRVPRLVQRPDGSFAAQMEVGSPQVDELRLKILEVLHR
HHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
EGRSLLALNALLFADRVNQQVIERKLQTRAQQAQDLIASAARTKALAVALNPITLLDTLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHC
GLAIDVTLILRLARLYGWPMSTAGATQLLQKIILSMLSLGAGEWVALLGLGSLKTLLGGF
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHCCC
SLGAYGSVALTQAVLAGFSCYAIGESARRYLAQGASWGPEGPKAAIAQILADLDEASITA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLREEIRHKIGFAFP
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA