Click here to switch to the map view.

The map label for this gene is psaA [H]

Identifier: 86607524

GI number: 86607524

Start: 26084

End: 28351

Strand: Reverse

Name: psaA [H]

Synonym: CYB_0022

Alternate gene names: 86607524

Gene position: 28351-26084 (Counterclockwise)

Preceding gene: 86607530

Following gene: 86607523

Centisome position: 0.93

GC content: 59.92

Gene sequence:

>2268_bases
ATGACAACTACGCCAAAGGAGCGAGAGCCGAAGGTCAAGGTGTCGGTTGATGTGGATCCGGTTCCCACCTCATTTGAGAA
ATGGGCTAAGCCGGGCCACTTCGATCGCAGCCTATCCCGTGGCCCCAAGACCACGACCTGGATCTGGAACCTCCATGCTC
TTGCTCATGACTTCGACAGTCACACCAGCGACTTAGAAGACGTCTCTCGTAAGATCTTTTCCGCTCACTTCGGCCACTTG
GCAGTGGTTTTCGTCTGGCTGAGCGGCATGTACTACCACGGAGCTCAGTTCTCCAACTATTCCGCTTGGCTGGCGGATCC
GATCAACATCAAGCCCAGCGCCCAAGTGGTCTGGCCCATCTTCGGCCAAGAGATCCTGAATGGGGATGTGGGCGGCGGCT
TCGAAGGGATCCGCATTACTTCCGGTCTGTTTCACCTCTGGCGAGCTGCCGGCATCACCAATGAGTTTCAACTCCTCTGC
ACCGCCATCGGTGGCTTGGTGATGGCCGGGTTGTGCCTGTTTGCCGGCTGGTTCCACTACCACAAGCGGGCTCCCAAGCT
GGAGTGGTTCCAAAATGTGGAATCGATGCTCAACCACCACCTGGCGGGCCTGCTGGGGCTGGGTTCTTTGGCCTGGGCCG
GTCACCAAATCCACGTGGCCATTCCCATCAACAAGATGTTGGATGCGGGCGTGCCGGCTGACCAGGTGCCTTTGCCCCAC
GAGTTCATCCTCAAGCCCGCCTTGATGAAGGAGATGTTCCCCAGCGTGGATTGGGGCATCTTCAGCGGGGTGGTGCCCTT
CTTTACCTTGGATTGGGGCAAGTACGCGGAGTTTCTCACCTTCAAGGGTGGCCTGGATCCGCAGAACGGTGCCCTCTGGC
TGACCGACCAAGCCCACCACCACTTGGCCATTGCCGTGCTCTTCATCGTGGCCGGGCACATGTACCGCACCAACTGGGGC
ATTGGCCACTCCATTAAAGAGATCCTGGAAGCCCACAAGGGCCCCTTCACCGGCGAAGGCCACAAGGGCCTCTACGAAGT
GCTCACCACCTCTTGGCATGCCCAGCTGGCCATCAACCTGGCCATGGTGGGATCCCTGAGCATCATCGTGGCGCAGCACA
TGTACGCCATGAACCCCTACCCCTACATGGGCATCGACTACGCCACCCAGATCTCCCTGTTTACCCACCACATGTGGATA
GGCGGCTTCTTCGTGGTGGGGGGTGCTGCCCACGGGGCCATTTACATGGTGCGGGACTACGACCCGGCGGTGAACCGCAA
CAACGTGTTGGATCGGGTATTGCGCCACCGCGACGCCATCATCAGCCACCTCAACTGGGTGTGTCTGTTCTTGGGCTTCC
ACGCCTTTGGCTTCTACGTCCACAACGACACCATGCAGGCCCTGGGTCGTCCGCAGGACATGTTCTCGGACACCGGCATC
CAACTGCAGCCCATCTTTGCCCAGTGGATCCAGTCGCTGCACACTTCGGCCATTGCCAGCACCGCTCCCTATGTGGGCGC
CTCGGTTAGCCCCATCTTTGGTGGCGACGTGGTGGCTGTGGGTGGCAAGGTGTCCATGATGCCCATGGTGCTGGGCACGG
CGGACTTCATGGTGCACCACATCCACGCCATGACCATCCACATTACGGTGCTGATCCTGCTCAAGGGGGTGTTGTTTGCC
CGCTCTTCCCGGTTGATCCCGGACAAAGGCAAATTGGGCTTCCGCTTCCCCTGCGATGGCCCGGGCCGCGGCGGCACCTG
CCAGGTCTCCGGCTGGGATCACGTGTTCCTGGGGCTGTTCTGGATGTACAACTGCATCTCCATCGTGATCTTCCACTTCA
GTTGGAAGATGCAGAGCGACATCTGGGGCACCGTCAACGCCGATGGCACGATTGAGCACATCACCGGCGGCAACTTTGCG
GCCAGCGCCATTAACATCAACGGCTGGTTGCGGGACTTCCTGTGGGCGCAATCGGTGCAGGTGATCAACTCCTACGGCTC
GGCTCTGTCGGCTTATGGGCTGCTCTTCTTGGGCGCTCACTTTGTCTGGGCCTTCAGCCTGATGTTCCTGTTCAGCGGTC
GCGGCTACTGGCAGGAGCTGATTGAGTCCATCGTTTGGGCCCACAACAAGCTAAAAGTCGCTCCGGCCATTCAACCCCGC
GCTCTGAGCATCATTCAGGGTCGGGCGGTCGGTGTGGCCCACTACCTGTTGGGAGGGATCGTCACCACCTGGGCGTTCTT
CCTGGCACGGTTCGGCGCACTCGGCTAA

Upstream 100 bases:

>100_bases
ACAAACCCTGACCTATAATGCCAGGTAAGTCCTGCCCTGGGGGAATCTTCTGCCAAGGGGTAGGGATGCTTCGTTCCTTG
TCGCAAGAGAGGAGTTCTTG

Downstream 100 bases:

>100_bases
GGCAAGGAGGAAGAGAGAATCATGACAACTGCAACTCGTTTTCCCCAATTCAGCCAAGACCTGGCCAGCGATCCCACCAC
GCGTCGGCTGTGGTATGGCA

Product: photosystem I P700 chlorophyll a apoprotein A1

Products: NA

Alternate protein names: PsaA [H]

Number of amino acids: Translated: 755; Mature: 754

Protein sequence:

>755_residues
MTTTPKEREPKVKVSVDVDPVPTSFEKWAKPGHFDRSLSRGPKTTTWIWNLHALAHDFDSHTSDLEDVSRKIFSAHFGHL
AVVFVWLSGMYYHGAQFSNYSAWLADPINIKPSAQVVWPIFGQEILNGDVGGGFEGIRITSGLFHLWRAAGITNEFQLLC
TAIGGLVMAGLCLFAGWFHYHKRAPKLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVAIPINKMLDAGVPADQVPLPH
EFILKPALMKEMFPSVDWGIFSGVVPFFTLDWGKYAEFLTFKGGLDPQNGALWLTDQAHHHLAIAVLFIVAGHMYRTNWG
IGHSIKEILEAHKGPFTGEGHKGLYEVLTTSWHAQLAINLAMVGSLSIIVAQHMYAMNPYPYMGIDYATQISLFTHHMWI
GGFFVVGGAAHGAIYMVRDYDPAVNRNNVLDRVLRHRDAIISHLNWVCLFLGFHAFGFYVHNDTMQALGRPQDMFSDTGI
QLQPIFAQWIQSLHTSAIASTAPYVGASVSPIFGGDVVAVGGKVSMMPMVLGTADFMVHHIHAMTIHITVLILLKGVLFA
RSSRLIPDKGKLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNCISIVIFHFSWKMQSDIWGTVNADGTIEHITGGNFA
ASAININGWLRDFLWAQSVQVINSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPR
ALSIIQGRAVGVAHYLLGGIVTTWAFFLARFGALG

Sequences:

>Translated_755_residues
MTTTPKEREPKVKVSVDVDPVPTSFEKWAKPGHFDRSLSRGPKTTTWIWNLHALAHDFDSHTSDLEDVSRKIFSAHFGHL
AVVFVWLSGMYYHGAQFSNYSAWLADPINIKPSAQVVWPIFGQEILNGDVGGGFEGIRITSGLFHLWRAAGITNEFQLLC
TAIGGLVMAGLCLFAGWFHYHKRAPKLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVAIPINKMLDAGVPADQVPLPH
EFILKPALMKEMFPSVDWGIFSGVVPFFTLDWGKYAEFLTFKGGLDPQNGALWLTDQAHHHLAIAVLFIVAGHMYRTNWG
IGHSIKEILEAHKGPFTGEGHKGLYEVLTTSWHAQLAINLAMVGSLSIIVAQHMYAMNPYPYMGIDYATQISLFTHHMWI
GGFFVVGGAAHGAIYMVRDYDPAVNRNNVLDRVLRHRDAIISHLNWVCLFLGFHAFGFYVHNDTMQALGRPQDMFSDTGI
QLQPIFAQWIQSLHTSAIASTAPYVGASVSPIFGGDVVAVGGKVSMMPMVLGTADFMVHHIHAMTIHITVLILLKGVLFA
RSSRLIPDKGKLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNCISIVIFHFSWKMQSDIWGTVNADGTIEHITGGNFA
ASAININGWLRDFLWAQSVQVINSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPR
ALSIIQGRAVGVAHYLLGGIVTTWAFFLARFGALG
>Mature_754_residues
TTTPKEREPKVKVSVDVDPVPTSFEKWAKPGHFDRSLSRGPKTTTWIWNLHALAHDFDSHTSDLEDVSRKIFSAHFGHLA
VVFVWLSGMYYHGAQFSNYSAWLADPINIKPSAQVVWPIFGQEILNGDVGGGFEGIRITSGLFHLWRAAGITNEFQLLCT
AIGGLVMAGLCLFAGWFHYHKRAPKLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVAIPINKMLDAGVPADQVPLPHE
FILKPALMKEMFPSVDWGIFSGVVPFFTLDWGKYAEFLTFKGGLDPQNGALWLTDQAHHHLAIAVLFIVAGHMYRTNWGI
GHSIKEILEAHKGPFTGEGHKGLYEVLTTSWHAQLAINLAMVGSLSIIVAQHMYAMNPYPYMGIDYATQISLFTHHMWIG
GFFVVGGAAHGAIYMVRDYDPAVNRNNVLDRVLRHRDAIISHLNWVCLFLGFHAFGFYVHNDTMQALGRPQDMFSDTGIQ
LQPIFAQWIQSLHTSAIASTAPYVGASVSPIFGGDVVAVGGKVSMMPMVLGTADFMVHHIHAMTIHITVLILLKGVLFAR
SSRLIPDKGKLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNCISIVIFHFSWKMQSDIWGTVNADGTIEHITGGNFAA
SAININGWLRDFLWAQSVQVINSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRA
LSIIQGRAVGVAHYLLGGIVTTWAFFLARFGALG

Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaA/psaB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006243
- InterPro:   IPR001280
- InterPro:   IPR020586 [H]

Pfam domain/function: PF00223 PsaA_PsaB [H]

EC number: NA

Molecular weight: Translated: 83660; Mature: 83529

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00419 PHOTOSYSTEM_I_PSAAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPKEREPKVKVSVDVDPVPTSFEKWAKPGHFDRSLSRGPKTTTWIWNLHALAHDFDS
CCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHCCCCCEEEEEEHHHHHHHHCC
HTSDLEDVSRKIFSAHFGHLAVVFVWLSGMYYHGAQFSNYSAWLADPINIKPSAQVVWPI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEECCCCCCCCCCEEEEHH
FGQEILNGDVGGGFEGIRITSGLFHLWRAAGITNEFQLLCTAIGGLVMAGLCLFAGWFHY
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKRAPKLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVAIPINKMLDAGVPADQVPLPH
HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECHHHHHCCCCCCCCCCCCH
EFILKPALMKEMFPSVDWGIFSGVVPFFTLDWGKYAEFLTFKGGLDPQNGALWLTDQAHH
HHHHCHHHHHHHCCCCCHHHHHCCHHHEEECHHHHHHHHEECCCCCCCCCEEEEECCCHH
HLAIAVLFIVAGHMYRTNWGIGHSIKEILEAHKGPFTGEGHKGLYEVLTTSWHAQLAINL
HHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHEEEH
AMVGSLSIIVAQHMYAMNPYPYMGIDYATQISLFTHHMWIGGFFVVGGAAHGAIYMVRDY
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECC
DPAVNRNNVLDRVLRHRDAIISHLNWVCLFLGFHAFGFYVHNDTMQALGRPQDMFSDTGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCHHHHCCCCC
QLQPIFAQWIQSLHTSAIASTAPYVGASVSPIFGGDVVAVGGKVSMMPMVLGTADFMVHH
EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHH
IHAMTIHITVLILLKGVLFARSSRLIPDKGKLGFRFPCDGPGRGGTCQVSGWDHVFLGLF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCHHHHHHHH
WMYNCISIVIFHFSWKMQSDIWGTVNADGTIEHITGGNFAASAININGWLRDFLWAQSVQ
HHHHHHHHHHHHHHEEECCCCCEEECCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHH
VINSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCH
ALSIIQGRAVGVAHYLLGGIVTTWAFFLARFGALG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTTPKEREPKVKVSVDVDPVPTSFEKWAKPGHFDRSLSRGPKTTTWIWNLHALAHDFDS
CCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHCCCCCEEEEEEHHHHHHHHCC
HTSDLEDVSRKIFSAHFGHLAVVFVWLSGMYYHGAQFSNYSAWLADPINIKPSAQVVWPI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEECCCCCCCCCCEEEEHH
FGQEILNGDVGGGFEGIRITSGLFHLWRAAGITNEFQLLCTAIGGLVMAGLCLFAGWFHY
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKRAPKLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVAIPINKMLDAGVPADQVPLPH
HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECHHHHHCCCCCCCCCCCCH
EFILKPALMKEMFPSVDWGIFSGVVPFFTLDWGKYAEFLTFKGGLDPQNGALWLTDQAHH
HHHHCHHHHHHHCCCCCHHHHHCCHHHEEECHHHHHHHHEECCCCCCCCCEEEEECCCHH
HLAIAVLFIVAGHMYRTNWGIGHSIKEILEAHKGPFTGEGHKGLYEVLTTSWHAQLAINL
HHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHEEEH
AMVGSLSIIVAQHMYAMNPYPYMGIDYATQISLFTHHMWIGGFFVVGGAAHGAIYMVRDY
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECC
DPAVNRNNVLDRVLRHRDAIISHLNWVCLFLGFHAFGFYVHNDTMQALGRPQDMFSDTGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCHHHHCCCCC
QLQPIFAQWIQSLHTSAIASTAPYVGASVSPIFGGDVVAVGGKVSMMPMVLGTADFMVHH
EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHH
IHAMTIHITVLILLKGVLFARSSRLIPDKGKLGFRFPCDGPGRGGTCQVSGWDHVFLGLF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCHHHHHHHH
WMYNCISIVIFHFSWKMQSDIWGTVNADGTIEHITGGNFAASAININGWLRDFLWAQSVQ
HHHHHHHHHHHHHHEEECCCCCEEECCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHH
VINSYGSALSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCH
ALSIIQGRAVGVAHYLLGGIVTTWAFFLARFGALG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA