| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607522
Identifier: 86607522
GI number: 86607522
Start: 23139
End: 23720
Strand: Reverse
Name: 86607522
Synonym: CYB_0020
Alternate gene names: NA
Gene position: 23720-23139 (Counterclockwise)
Preceding gene: 86607523
Following gene: 86607521
Centisome position: 0.78
GC content: 53.78
Gene sequence:
>582_bases ATGACTCTAGCCGCCCGATTGGATCCCTATATCAGGCGATATACCTTTGAGGAGTTTCATCGGCTGATTGAGTCTGGACA GATTGAAGAGCCCAATCAGTTGGAGCTGATTGACGGGCTCCTGGTTCAAAAGATGACGAAAGGGGAGAGGCACGCCGCCT ACTGTAGCCGCCTGTACCGACTGTTGGTGGGCCTTGTGCAGGAGCAAGCTATTGTGCGCACCCAGGATCCGGTGCAACTG CCCCCCAATCACGAGCCAGAGCCCGACTTTGCCATTGTGCGCTTTCAGCAGGATGAGTACCGCTCTCGGCATCCTCAGCC CGAAGACATCTATCTCATCATCGAAGTGGCTGATTCTTCCCTTACCTATGATCGGGAAGTCAAACTCGGACTCTACGCCA AAGCCGGGATCCCCAACTACTGGATCTTGAACTTGCAAGAGAACTGCCTAGAGACGTACAGCTTGCCAACAGGGTCGGGA GTTTACCAGAAAAGAGAGGCTTACACCCCCGAGGAGAAAGTTGGGATCCCAGGGATCCGGGCTGGAGAGTTGAGTCTGGA TCAGGTTTTTTCCATCGGTTAA
Upstream 100 bases:
>100_bases ATAACCTGCTGAATAGGGATCCCTCGGCTGGTCCAGGGATCCCTTTTTTGTGAGTTGGTAGAGTGGTGATATGAAGTTTA GGGTCTGATGAGTTTGGTCG
Downstream 100 bases:
>100_bases GGCAGGGATCCCTTGCCGGCAGATCGAATCTTGGCTGGCAGGAGCATGACTCTATTCAATGATACGCTGGACTATACTGA AAATAATGTACAGTATGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTLAARLDPYIRRYTFEEFHRLIESGQIEEPNQLELIDGLLVQKMTKGERHAAYCSRLYRLLVGLVQEQAIVRTQDPVQL PPNHEPEPDFAIVRFQQDEYRSRHPQPEDIYLIIEVADSSLTYDREVKLGLYAKAGIPNYWILNLQENCLETYSLPTGSG VYQKREAYTPEEKVGIPGIRAGELSLDQVFSIG
Sequences:
>Translated_193_residues MTLAARLDPYIRRYTFEEFHRLIESGQIEEPNQLELIDGLLVQKMTKGERHAAYCSRLYRLLVGLVQEQAIVRTQDPVQL PPNHEPEPDFAIVRFQQDEYRSRHPQPEDIYLIIEVADSSLTYDREVKLGLYAKAGIPNYWILNLQENCLETYSLPTGSG VYQKREAYTPEEKVGIPGIRAGELSLDQVFSIG >Mature_192_residues TLAARLDPYIRRYTFEEFHRLIESGQIEEPNQLELIDGLLVQKMTKGERHAAYCSRLYRLLVGLVQEQAIVRTQDPVQLP PNHEPEPDFAIVRFQQDEYRSRHPQPEDIYLIIEVADSSLTYDREVKLGLYAKAGIPNYWILNLQENCLETYSLPTGSGV YQKREAYTPEEKVGIPGIRAGELSLDQVFSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22212; Mature: 22080
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAARLDPYIRRYTFEEFHRLIESGQIEEPNQLELIDGLLVQKMTKGERHAAYCSRLYR CCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH LLVGLVQEQAIVRTQDPVQLPPNHEPEPDFAIVRFQQDEYRSRHPQPEDIYLIIEVADSS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCEEEEEEECCCC LTYDREVKLGLYAKAGIPNYWILNLQENCLETYSLPTGSGVYQKREAYTPEEKVGIPGIR CCCCCEEEEEEEEECCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHCCCCHHHCCCCCCC AGELSLDQVFSIG CCCCCHHHHHCCC >Mature Secondary Structure TLAARLDPYIRRYTFEEFHRLIESGQIEEPNQLELIDGLLVQKMTKGERHAAYCSRLYR CCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH LLVGLVQEQAIVRTQDPVQLPPNHEPEPDFAIVRFQQDEYRSRHPQPEDIYLIIEVADSS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCEEEEEEECCCC LTYDREVKLGLYAKAGIPNYWILNLQENCLETYSLPTGSGVYQKREAYTPEEKVGIPGIR CCCCCEEEEEEEEECCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHCCCCHHHCCCCCCC AGELSLDQVFSIG CCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA