Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86361061
Identifier: 86361061
GI number: 86361061
Start: 371765
End: 372799
Strand: Reverse
Name: 86361061
Synonym: RHE_PF00331
Alternate gene names: NA
Gene position: 372799-371765 (Counterclockwise)
Preceding gene: 86361062
Following gene: 86361058
Centisome position: 58.02
GC content: 63.29
Gene sequence:
>1035_bases TTGATCGCCTGTTTCGGCGCCTTGCTGGGCATCGGCCTCACCGGCGTCATCAGCGGCTATCTGTTTGGCCAGGGGCCGCA TCTTCCATTGATCGTCGCGCCGATGGGGGCGTCGGCGGTGCTGCTTTTCGCAGTGCCGGCAAGTCCGCTGGCACAGCCGT GGGCGATCATCGGCGGCAATACAATTTCCGCTCTGATGGGCATCATTGCCGCCTATTTCATTCGTGATCCGATCATCGCA ACGGGTGTCGGCGTTTCGCTGGCCATCGGCGCGATGTCGTTCACGCGATGCCTTCACCCGCCGGGAGGGGCTGCGGCACT CACCGCCGTGCTCGGCGGTCCCGTCGTCGCCGGTTGGGGGTTCCTCTTTCCCTTCGTGCCGGTCGCTTTGAACTCCTGCA TTCTCGTGGGGCTCGGGCTGCTGTTCCACAAGCTTTCCAGACGGAACTATCCGCACGTCGTTCCGAAGCCGGCGGAGAAC ACCCACCAGACGATCGATCCGCCATCCGCCGCGCGGGTGGGCTTTCGCGAGGAGGATGTCGATGCCGCCCTCGAGGCGCT CGACGAAACGTTCGATATCGATCGGGCAGACCTCGGAAGATTGCTGCAGCAGGTCGAACTGCAGGCAGCCATCCGATCAA ACGACAAGATCAGCTGCGCCGATATCATGTCGCGTGACGTGATCGCCATCGGCGAGACCTGCGAGCCGGACGCCGCGCGA CATCTTCTTTTGAAGCATAATATCCGCACCCTGCCGGTGAAGGATCCGGAAGGCCGCCTGGTCGGCACTGTCGGCTTACG TGAATTGTTTGGGGGCGGCGATACGATTGCCCACGCGATCTCCAAACCGGCAGTGGCGAGAGCTTCAGATGCTGCCCTGT CGCTGCTGCCGGTTCTGACGGACGGGTGCACCCATGCCGTCATCATTGTCGACGACGACCACCGGATCCTCGGCCTGATA TCGCAGACCGACCTTTTGAGCGCCGTGGCGCGGCTGCTGCCGAACGACGGCGACACGATCGCTGCCGTGGCGTGA
Upstream 100 bases:
>100_bases TCGCATGCAGTTTCCCGTTTCACCGAAAGTGGGGCCGAGCCGTATCCGCCGCTTTCGCCTGTTTTCGCCGATCCTGGCCG GCGCGACATTAAGAGAACGA
Downstream 100 bases:
>100_bases AACGTGCGGAGTGGCTGGGATTTCCGCTGGCCCGCCACGGCCGCCGAAGGCGACAAGCCTTCGTCCTCAGCCCTTCCGAT ATGATCACGGCTATGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: HPP Family Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; Cbs Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; CbsHpp; HPP Domain-Containing Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; HPP Family
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGNTISALMGIIAAYFIRDPIIA TGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWGFLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAEN THQTIDPPSAARVGFREEDVDAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLTDGCTHAVIIVDDDHRILGLI SQTDLLSAVARLLPNDGDTIAAVA
Sequences:
>Translated_344_residues MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGNTISALMGIIAAYFIRDPIIA TGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWGFLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAEN THQTIDPPSAARVGFREEDVDAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLTDGCTHAVIIVDDDHRILGLI SQTDLLSAVARLLPNDGDTIAAVA >Mature_344_residues MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGNTISALMGIIAAYFIRDPIIA TGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWGFLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAEN THQTIDPPSAARVGFREEDVDAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLTDGCTHAVIIVDDDHRILGLI SQTDLLSAVARLLPNDGDTIAAVA
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35785; Mature: 35785
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGN CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEECCC TISALMGIIAAYFIRDPIIATGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWG HHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH FLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAENTHQTIDPPSAARVGFREEDV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHH DAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEEECCCCCHHHHH HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLT HHHHHCCCEECCCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCHHCCCHHHHHHHHHHH DGCTHAVIIVDDDHRILGLISQTDLLSAVARLLPNDGDTIAAVA CCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGN CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEECCC TISALMGIIAAYFIRDPIIATGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWG HHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH FLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAENTHQTIDPPSAARVGFREEDV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHH DAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEEECCCCCHHHHH HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLT HHHHHCCCEECCCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCHHCCCHHHHHHHHHHH DGCTHAVIIVDDDHRILGLISQTDLLSAVARLLPNDGDTIAAVA CCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA