Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

Click here to switch to the map view.

The map label for this gene is 86361061

Identifier: 86361061

GI number: 86361061

Start: 371765

End: 372799

Strand: Reverse

Name: 86361061

Synonym: RHE_PF00331

Alternate gene names: NA

Gene position: 372799-371765 (Counterclockwise)

Preceding gene: 86361062

Following gene: 86361058

Centisome position: 58.02

GC content: 63.29

Gene sequence:

>1035_bases
TTGATCGCCTGTTTCGGCGCCTTGCTGGGCATCGGCCTCACCGGCGTCATCAGCGGCTATCTGTTTGGCCAGGGGCCGCA
TCTTCCATTGATCGTCGCGCCGATGGGGGCGTCGGCGGTGCTGCTTTTCGCAGTGCCGGCAAGTCCGCTGGCACAGCCGT
GGGCGATCATCGGCGGCAATACAATTTCCGCTCTGATGGGCATCATTGCCGCCTATTTCATTCGTGATCCGATCATCGCA
ACGGGTGTCGGCGTTTCGCTGGCCATCGGCGCGATGTCGTTCACGCGATGCCTTCACCCGCCGGGAGGGGCTGCGGCACT
CACCGCCGTGCTCGGCGGTCCCGTCGTCGCCGGTTGGGGGTTCCTCTTTCCCTTCGTGCCGGTCGCTTTGAACTCCTGCA
TTCTCGTGGGGCTCGGGCTGCTGTTCCACAAGCTTTCCAGACGGAACTATCCGCACGTCGTTCCGAAGCCGGCGGAGAAC
ACCCACCAGACGATCGATCCGCCATCCGCCGCGCGGGTGGGCTTTCGCGAGGAGGATGTCGATGCCGCCCTCGAGGCGCT
CGACGAAACGTTCGATATCGATCGGGCAGACCTCGGAAGATTGCTGCAGCAGGTCGAACTGCAGGCAGCCATCCGATCAA
ACGACAAGATCAGCTGCGCCGATATCATGTCGCGTGACGTGATCGCCATCGGCGAGACCTGCGAGCCGGACGCCGCGCGA
CATCTTCTTTTGAAGCATAATATCCGCACCCTGCCGGTGAAGGATCCGGAAGGCCGCCTGGTCGGCACTGTCGGCTTACG
TGAATTGTTTGGGGGCGGCGATACGATTGCCCACGCGATCTCCAAACCGGCAGTGGCGAGAGCTTCAGATGCTGCCCTGT
CGCTGCTGCCGGTTCTGACGGACGGGTGCACCCATGCCGTCATCATTGTCGACGACGACCACCGGATCCTCGGCCTGATA
TCGCAGACCGACCTTTTGAGCGCCGTGGCGCGGCTGCTGCCGAACGACGGCGACACGATCGCTGCCGTGGCGTGA

Upstream 100 bases:

>100_bases
TCGCATGCAGTTTCCCGTTTCACCGAAAGTGGGGCCGAGCCGTATCCGCCGCTTTCGCCTGTTTTCGCCGATCCTGGCCG
GCGCGACATTAAGAGAACGA

Downstream 100 bases:

>100_bases
AACGTGCGGAGTGGCTGGGATTTCCGCTGGCCCGCCACGGCCGCCGAAGGCGACAAGCCTTCGTCCTCAGCCCTTCCGAT
ATGATCACGGCTATGACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: HPP Family Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; Cbs Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; CbsHpp; HPP Domain-Containing Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; HPP Family

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGNTISALMGIIAAYFIRDPIIA
TGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWGFLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAEN
THQTIDPPSAARVGFREEDVDAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR
HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLTDGCTHAVIIVDDDHRILGLI
SQTDLLSAVARLLPNDGDTIAAVA

Sequences:

>Translated_344_residues
MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGNTISALMGIIAAYFIRDPIIA
TGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWGFLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAEN
THQTIDPPSAARVGFREEDVDAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR
HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLTDGCTHAVIIVDDDHRILGLI
SQTDLLSAVARLLPNDGDTIAAVA
>Mature_344_residues
MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGNTISALMGIIAAYFIRDPIIA
TGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWGFLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAEN
THQTIDPPSAARVGFREEDVDAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR
HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLTDGCTHAVIIVDDDHRILGLI
SQTDLLSAVARLLPNDGDTIAAVA

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35785; Mature: 35785

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGN
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEECCC
TISALMGIIAAYFIRDPIIATGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWG
HHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
FLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAENTHQTIDPPSAARVGFREEDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHH
DAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEEECCCCCHHHHH
HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLT
HHHHHCCCEECCCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCHHCCCHHHHHHHHHHH
DGCTHAVIIVDDDHRILGLISQTDLLSAVARLLPNDGDTIAAVA
CCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MIACFGALLGIGLTGVISGYLFGQGPHLPLIVAPMGASAVLLFAVPASPLAQPWAIIGGN
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEECCC
TISALMGIIAAYFIRDPIIATGVGVSLAIGAMSFTRCLHPPGGAAALTAVLGGPVVAGWG
HHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
FLFPFVPVALNSCILVGLGLLFHKLSRRNYPHVVPKPAENTHQTIDPPSAARVGFREEDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHH
DAALEALDETFDIDRADLGRLLQQVELQAAIRSNDKISCADIMSRDVIAIGETCEPDAAR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCEEEECCCCCHHHHH
HLLLKHNIRTLPVKDPEGRLVGTVGLRELFGGGDTIAHAISKPAVARASDAALSLLPVLT
HHHHHCCCEECCCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCHHCCCHHHHHHHHHHH
DGCTHAVIIVDDDHRILGLISQTDLLSAVARLLPNDGDTIAAVA
CCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA