Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is gpmB [H]
Identifier: 86361053
GI number: 86361053
Start: 363648
End: 364397
Strand: Reverse
Name: gpmB [H]
Synonym: RHE_PF00323
Alternate gene names: 86361053
Gene position: 364397-363648 (Counterclockwise)
Preceding gene: 86361054
Following gene: 86361045
Centisome position: 56.71
GC content: 54.53
Gene sequence:
>750_bases ATGATGACCTCTTCGCCGGCTTCGACCTTCGCCAGCAATTCAGATAGACGAGCCTTCGCTTCAGCGACTTTGACTGTGAT CGCCATAACGGTTTCTCCCCTTGTTTGCATCTCTCGTCGAGCCAGTGCGAGCTATGTTAGCAGATACCGCATCATCCCCC AAAGGTTCAAAGAATTGACGACGATTTTTCTCCTTCGACATGGCGAGACCGTCTGGAATGCGGCAGGTCGCTTTCAGGGG CAGAAGGATTCCCCACTTACTGAAAGAGGGCAGCAGCAGGCGGATGAGGCGGGTAGGCGTCTTGCTCGCGAGCTTGAGCG GCATCCGGGTCAAATCGATGTTCATGTCAGCCCGTTGGGCCGCACGAAGGAAACAGCGGCGCGCATTGCGCGATATGTGC CCTTGCGCAGCCGCGACGAACCGCGATTGATGGAAGTGACGATCGGCTCCTGGGATGGCATGAGCCACTATGAAATCCAC ATGGAATATCCGGGCATGCTCGAAGGCGCCGATGCTTTTAACTGGTTCTTTCGATCGCCGGATGGAGAAACATTCGATGC AGCTTGCGCCCGCATAAAGGAGTGGCTGTCGCAGCTTCGCTCGACCACGATAGCCATATCTCATGGACTGACGGGGAGAC TGATACGAGGTATGTATCTTGGATTATCAAGGGAAGAAATGCTAGAACTACCGGTGCCGCAGACCGGATTTTATCGGCTT CAGAACGGCCAAGCCCAATACATCGAATAA
Upstream 100 bases:
>100_bases ACGAGGGATGCGCTGCGCCTTAATTTCGGCGATCAGCGTGTCGATATCGTTCTTGCTGCGAACTCGAGAAAGGCGAGCAA CCGGCTTGGTGCCGCGAGAG
Downstream 100 bases:
>100_bases TTCTCCTCGGCCAGATCGTCGCGTCGAGCTGACGCCGGCACTCAGCGATCAAGAGCTTGAGGCGATCGAGGCGTCGCAGA TGCAGCCGGGTCTTAGTCAT
Product: putative phosphoglycerate mutase protein
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELTTIFLLRHGETVWNAAGRFQG QKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLGRTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIH MEYPGMLEGADAFNWFFRSPDGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL QNGQAQYIE
Sequences:
>Translated_249_residues MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELTTIFLLRHGETVWNAAGRFQG QKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLGRTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIH MEYPGMLEGADAFNWFFRSPDGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL QNGQAQYIE >Mature_249_residues MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELTTIFLLRHGETVWNAAGRFQG QKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLGRTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIH MEYPGMLEGADAFNWFFRSPDGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL QNGQAQYIE
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=177, Percent_Identity=32.7683615819209, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322306, Length=184, Percent_Identity=28.804347826087, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 28142; Mature: 28142
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELT CCCCCCCHHHCCCCCCHHHHHHHEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TIFLLRHGETVWNAAGRFQGQKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLG HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC RTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIHMEYPGMLEGADAFNWFFRSP CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHEEECC DGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL CCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCHHHHHHCCCCCCCCEEE QNGQAQYIE ECCCCCCCC >Mature Secondary Structure MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELT CCCCCCCHHHCCCCCCHHHHHHHEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TIFLLRHGETVWNAAGRFQGQKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLG HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC RTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIHMEYPGMLEGADAFNWFFRSP CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHEEECC DGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL CCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCHHHHHHCCCCCCCCEEE QNGQAQYIE ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA