Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is gpmB [H]

Identifier: 86361053

GI number: 86361053

Start: 363648

End: 364397

Strand: Reverse

Name: gpmB [H]

Synonym: RHE_PF00323

Alternate gene names: 86361053

Gene position: 364397-363648 (Counterclockwise)

Preceding gene: 86361054

Following gene: 86361045

Centisome position: 56.71

GC content: 54.53

Gene sequence:

>750_bases
ATGATGACCTCTTCGCCGGCTTCGACCTTCGCCAGCAATTCAGATAGACGAGCCTTCGCTTCAGCGACTTTGACTGTGAT
CGCCATAACGGTTTCTCCCCTTGTTTGCATCTCTCGTCGAGCCAGTGCGAGCTATGTTAGCAGATACCGCATCATCCCCC
AAAGGTTCAAAGAATTGACGACGATTTTTCTCCTTCGACATGGCGAGACCGTCTGGAATGCGGCAGGTCGCTTTCAGGGG
CAGAAGGATTCCCCACTTACTGAAAGAGGGCAGCAGCAGGCGGATGAGGCGGGTAGGCGTCTTGCTCGCGAGCTTGAGCG
GCATCCGGGTCAAATCGATGTTCATGTCAGCCCGTTGGGCCGCACGAAGGAAACAGCGGCGCGCATTGCGCGATATGTGC
CCTTGCGCAGCCGCGACGAACCGCGATTGATGGAAGTGACGATCGGCTCCTGGGATGGCATGAGCCACTATGAAATCCAC
ATGGAATATCCGGGCATGCTCGAAGGCGCCGATGCTTTTAACTGGTTCTTTCGATCGCCGGATGGAGAAACATTCGATGC
AGCTTGCGCCCGCATAAAGGAGTGGCTGTCGCAGCTTCGCTCGACCACGATAGCCATATCTCATGGACTGACGGGGAGAC
TGATACGAGGTATGTATCTTGGATTATCAAGGGAAGAAATGCTAGAACTACCGGTGCCGCAGACCGGATTTTATCGGCTT
CAGAACGGCCAAGCCCAATACATCGAATAA

Upstream 100 bases:

>100_bases
ACGAGGGATGCGCTGCGCCTTAATTTCGGCGATCAGCGTGTCGATATCGTTCTTGCTGCGAACTCGAGAAAGGCGAGCAA
CCGGCTTGGTGCCGCGAGAG

Downstream 100 bases:

>100_bases
TTCTCCTCGGCCAGATCGTCGCGTCGAGCTGACGCCGGCACTCAGCGATCAAGAGCTTGAGGCGATCGAGGCGTCGCAGA
TGCAGCCGGGTCTTAGTCAT

Product: putative phosphoglycerate mutase protein

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELTTIFLLRHGETVWNAAGRFQG
QKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLGRTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIH
MEYPGMLEGADAFNWFFRSPDGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL
QNGQAQYIE

Sequences:

>Translated_249_residues
MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELTTIFLLRHGETVWNAAGRFQG
QKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLGRTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIH
MEYPGMLEGADAFNWFFRSPDGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL
QNGQAQYIE
>Mature_249_residues
MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELTTIFLLRHGETVWNAAGRFQG
QKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLGRTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIH
MEYPGMLEGADAFNWFFRSPDGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL
QNGQAQYIE

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790856, Length=177, Percent_Identity=32.7683615819209, Blast_Score=70, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322306, Length=184, Percent_Identity=28.804347826087, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 28142; Mature: 28142

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00175 PG_MUTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELT
CCCCCCCHHHCCCCCCHHHHHHHEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TIFLLRHGETVWNAAGRFQGQKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLG
HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
RTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIHMEYPGMLEGADAFNWFFRSP
CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHEEECC
DGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL
CCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCHHHHHHCCCCCCCCEEE
QNGQAQYIE
ECCCCCCCC
>Mature Secondary Structure
MMTSSPASTFASNSDRRAFASATLTVIAITVSPLVCISRRASASYVSRYRIIPQRFKELT
CCCCCCCHHHCCCCCCHHHHHHHEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TIFLLRHGETVWNAAGRFQGQKDSPLTERGQQQADEAGRRLARELERHPGQIDVHVSPLG
HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
RTKETAARIARYVPLRSRDEPRLMEVTIGSWDGMSHYEIHMEYPGMLEGADAFNWFFRSP
CCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHEEECC
DGETFDAACARIKEWLSQLRSTTIAISHGLTGRLIRGMYLGLSREEMLELPVPQTGFYRL
CCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCHHHHHHCCCCCCCCEEE
QNGQAQYIE
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA