Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86361026
Identifier: 86361026
GI number: 86361026
Start: 329789
End: 332278
Strand: Reverse
Name: 86361026
Synonym: RHE_PF00296
Alternate gene names: NA
Gene position: 332278-329789 (Counterclockwise)
Preceding gene: 86361029
Following gene: 86361025
Centisome position: 51.72
GC content: 65.18
Gene sequence:
>2490_bases ATGGCGCCCGCCTACAGCGTGGCGCGGGGGCAGACGATCACCGCGTGGGCGGTTTCCGGCCTCATTGCCAGCTATTTTCC CGGCGAGCCGGCGCCTGCCGAGGACCGCGTCAACTATCGGTTCATCAACGGCTTCGTCGACGTCGGCGACCTGCCTTGCC GCAAGGCCTTTTGGTCGACAATGGTGGGGCGCGAGCTTGTCCCCGATAAAGCCTGGCCGAGCGAGAGCCTCTATCTTCCG GGTTCGAATCGCCGCGTCGAATTCACCAGCTTCTGGCATGTTCCGACGCATGTCAGGCGATGGCTGAAGGGCACCTTCAG AACGGAAGCCTCGCGCACGCTCAACCTCGCGCTCAAGACGTGCGGCGGCGTTCGCATATGGGTCAACGGCCAGGAGGCGG TGCGCTTCGAACCCTTCAGGCGCAACCTCGAGAGCGGAACCGAGATAAGGCTGCCGCTCGAAGCGGGCGACAACGAGATT CTCGTCCATACCGAAGATCTTGCCGAGCGCGACACGACCTGGTTCTTCGAACTCGAAATGCTGGACGAGGAGCCGCTCTG CGTGCTGCTGCCGGTATCGCTCGATCAGGATGAGGTGAGGGAGCTGGAAGCGCTTTCGCGAGGCGTGCGCCCCGCCCGCG ACGTGTTCGTCAACCAGCCGCCGGAGATCATCTTCGATACGGCGCCGGAGCGCGACCTGCCGGTGGAGCTCAAAGTGGTC GGCCATGGCCACGAGCGACCGGTTCTCGCCCATGCGAAACTGACCCTGCACGCCGGTCAGAACCGGCTGACGGCCGTCGA TGTCTGCGCCATTGCGGACGGTTATCACGGCATCCGCATGACGATCGGCTCCGGGCCGGGCTCGGTCACCCGCGTCATCG ACGCCGCCTTCATGAGCAGCATCTCGCCATTGCCGGCAGAGGCATCGCTTGCCGCCCGCAAGCGGCAGGCGTTGGAATAC AGCGCTCGCTTCGGCGCCAACCGCGCCGGCCGCCTGATTGCCATGATGGAAACTGGCTACGACGACCAGGAGAGCTTCGA CCGCATCGTCGATGCGACGCTCGCCTCCATCGATGCGCGCGAGGATTGCTCGGATTTCATCATGGTGCCGCTCCTGTGGC TGCTCGGCGCCCATGGCGACCGCATGCCCAAGGCCACGGTCGAGCGCATCCGCCAATCCGTTCTCTCCTATCGCTACTGG GTCGACGAGCCGGGCAATGACGCGATGTGGTTCTGGAGCGAGAACCATGTGCTCTGCTTCCATACCAGCCAGCTTTTGGC CGGGCTTCTTTTGCCCGACGAGGTGTTCTCAGCCTCGGGCCGCACGGGACGGCAGCAGGCGGAACTTGCCGTCGAGCGCC TCGGGCGCTGGTTCGACAGCGTTGAGGCCCATGGTCTGGCGGAGTGGAACTCGGCCGCCTATTACCCGATCGATTTCATC GGCCTAATGGCGCTGGAGCGCTGGGCGGAGAGCGGGATCGCCGATCGTGCCCGGCGCCAGATCGATCTCATCTTCCGTAT GATCGCCCTTCATACGCTTGCCGGCGTTCCGGCGGGGTCGCAGGGGCGCGCCTACGACAAGGAACTGCGCGCCGGCCCGC TGACCGAACTTGCGCCCTTCGCCCAGGTCGCCTTTGGCACCGGCTGGCTCAACAATGGCGTGGCGGCGCTGACCATGTTC TGCGCCGGTGACTATGAGCCGCCGGCCGATCTCGCCGAGCTTGCTTCGCTGTCGCGGGGAAGAAGCGTCGAGGCCCGCTA CAGTCAGGGGCTGGAGAGCGGAAAGCTCGTGCTCTTCAAGAACGAGGCTGCGCAGCTTTCGACGGTCGTCGACCACAAGA CCGGCCGGAAGGGGCATCAGCAGCACGTTCTGGATATCCGGCTCGCCGGCCATCCGATGGCGAGGCTGTGGGTTAATCAT CCCGGCGAAGACGATCCGTGGGGCAACCAAAGACCGTCCTACTGGGCCGGAAACGGCATCCTGCCGCGCGTCGCCCAGCA CCGCGATGTCGCCCTGCTGATCGAGGACACGGGCGACGCACGGCATGCCTGGACGCATGCCTATATCGGCCGCGACGGCC TCGACGATCTCATCGTCGAAGACAGATGGTTGATCGCCCGGTCGGGCAGGGGATTTGCCGCTCTTTGGGCGTCTAACGGC CTGAAACTGATAACCGATGGGCCGACCGCCGGCCGCGAGGCGCGGTCCTGCGGGTCGCTCTGCGGTTGGGCGGCCATCGT CGGATGCGGCAATGACGATGCCTTCAAGGCCTTTCTCGAACGCCTGTGCCAGACAACGGTTGCCTTCGATCCTGTGCTTC GGCGTCTTTCCCTGACGCCGCCCGGCGGTCTTGAGATCTCCCTCTCTTATGCCGACGGTCTTTCGATCGCCGGCAAGCCA CGGCCGTTCACCCATGATCAGCCGCACCCCATCCTCACCCACGACAGCGCCGCGTCCCAAGCCGCCGCTGACGGGCCGTT TTACTCCTGA
Upstream 100 bases:
>100_bases TTTCGAGAATAACGCTCATTACATAGCGAATGAAAAGATTTTCATGCGATTGCGGAGGAGGCAGTCTGTGAACGCGGAAC GCATCAAGCAACCGGACGGC
Downstream 100 bases:
>100_bases GAATATAGGATTTCAGCATGAATACAGCATCTGTCGACAACGCCGCTCTCCTGACGACGATCGATCGCGTGGCGACGGCT TTCAGCCGGCTCAGGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 829; Mature: 828
Protein sequence:
>829_residues MAPAYSVARGQTITAWAVSGLIASYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRELVPDKAWPSESLYLP GSNRRVEFTSFWHVPTHVRRWLKGTFRTEASRTLNLALKTCGGVRIWVNGQEAVRFEPFRRNLESGTEIRLPLEAGDNEI LVHTEDLAERDTTWFFELEMLDEEPLCVLLPVSLDQDEVRELEALSRGVRPARDVFVNQPPEIIFDTAPERDLPVELKVV GHGHERPVLAHAKLTLHAGQNRLTAVDVCAIADGYHGIRMTIGSGPGSVTRVIDAAFMSSISPLPAEASLAARKRQALEY SARFGANRAGRLIAMMETGYDDQESFDRIVDATLASIDAREDCSDFIMVPLLWLLGAHGDRMPKATVERIRQSVLSYRYW VDEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDEVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEWNSAAYYPIDFI GLMALERWAESGIADRARRQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGWLNNGVAALTMF CAGDYEPPADLAELASLSRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNH PGEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTGDARHAWTHAYIGRDGLDDLIVEDRWLIARSGRGFAALWASNG LKLITDGPTAGREARSCGSLCGWAAIVGCGNDDAFKAFLERLCQTTVAFDPVLRRLSLTPPGGLEISLSYADGLSIAGKP RPFTHDQPHPILTHDSAASQAAADGPFYS
Sequences:
>Translated_829_residues MAPAYSVARGQTITAWAVSGLIASYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRELVPDKAWPSESLYLP GSNRRVEFTSFWHVPTHVRRWLKGTFRTEASRTLNLALKTCGGVRIWVNGQEAVRFEPFRRNLESGTEIRLPLEAGDNEI LVHTEDLAERDTTWFFELEMLDEEPLCVLLPVSLDQDEVRELEALSRGVRPARDVFVNQPPEIIFDTAPERDLPVELKVV GHGHERPVLAHAKLTLHAGQNRLTAVDVCAIADGYHGIRMTIGSGPGSVTRVIDAAFMSSISPLPAEASLAARKRQALEY SARFGANRAGRLIAMMETGYDDQESFDRIVDATLASIDAREDCSDFIMVPLLWLLGAHGDRMPKATVERIRQSVLSYRYW VDEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDEVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEWNSAAYYPIDFI GLMALERWAESGIADRARRQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGWLNNGVAALTMF CAGDYEPPADLAELASLSRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNH PGEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTGDARHAWTHAYIGRDGLDDLIVEDRWLIARSGRGFAALWASNG LKLITDGPTAGREARSCGSLCGWAAIVGCGNDDAFKAFLERLCQTTVAFDPVLRRLSLTPPGGLEISLSYADGLSIAGKP RPFTHDQPHPILTHDSAASQAAADGPFYS >Mature_828_residues APAYSVARGQTITAWAVSGLIASYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWSTMVGRELVPDKAWPSESLYLPG SNRRVEFTSFWHVPTHVRRWLKGTFRTEASRTLNLALKTCGGVRIWVNGQEAVRFEPFRRNLESGTEIRLPLEAGDNEIL VHTEDLAERDTTWFFELEMLDEEPLCVLLPVSLDQDEVRELEALSRGVRPARDVFVNQPPEIIFDTAPERDLPVELKVVG HGHERPVLAHAKLTLHAGQNRLTAVDVCAIADGYHGIRMTIGSGPGSVTRVIDAAFMSSISPLPAEASLAARKRQALEYS ARFGANRAGRLIAMMETGYDDQESFDRIVDATLASIDAREDCSDFIMVPLLWLLGAHGDRMPKATVERIRQSVLSYRYWV DEPGNDAMWFWSENHVLCFHTSQLLAGLLLPDEVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEWNSAAYYPIDFIG LMALERWAESGIADRARRQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPFAQVAFGTGWLNNGVAALTMFC AGDYEPPADLAELASLSRGRSVEARYSQGLESGKLVLFKNEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNHP GEDDPWGNQRPSYWAGNGILPRVAQHRDVALLIEDTGDARHAWTHAYIGRDGLDDLIVEDRWLIARSGRGFAALWASNGL KLITDGPTAGREARSCGSLCGWAAIVGCGNDDAFKAFLERLCQTTVAFDPVLRRLSLTPPGGLEISLSYADGLSIAGKPR PFTHDQPHPILTHDSAASQAAADGPFYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91457; Mature: 91326
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAYSVARGQTITAWAVSGLIASYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWST CCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECEEECCCCCHHHHHHHH MVGRELVPDKAWPSESLYLPGSNRRVEFTSFWHVPTHVRRWLKGTFRTEASRTLNLALKT HHHHHCCCCCCCCCCCEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCCCHHEEEEEEEC CGGVRIWVNGQEAVRFEPFRRNLESGTEIRLPLEAGDNEILVHTEDLAERDTTWFFELEM CCCEEEEECCCCCEEECHHHHCCCCCCEEEEEEECCCCEEEEEEHHHHCCCCEEEEEEEE LDEEPLCVLLPVSLDQDEVRELEALSRGVRPARDVFVNQPPEIIFDTAPERDLPVELKVV CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCEEEEEE GHGHERPVLAHAKLTLHAGQNRLTAVDVCAIADGYHGIRMTIGSGPGSVTRVIDAAFMSS ECCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHC ISPLPAEASLAARKRQALEYSARFGANRAGRLIAMMETGYDDQESFDRIVDATLASIDAR CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCH EDCSDFIMVPLLWLLGAHGDRMPKATVERIRQSVLSYRYWVDEPGNDAMWFWSENHVLCF HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCEEEE HTSQLLAGLLLPDEVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEWNSAAYYPIDFI EHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH GLMALERWAESGIADRARRQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPF HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHH AQVAFGTGWLNNGVAALTMFCAGDYEPPADLAELASLSRGRSVEARYSQGLESGKLVLFK HHHHHCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEE NEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNHPGEDDPWGNQRPSYWAGNGI CCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEECCCC LPRVAQHRDVALLIEDTGDARHAWTHAYIGRDGLDDLIVEDRWLIARSGRGFAALWASNG CHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCCEEEEEECCC LKLITDGPTAGREARSCGSLCGWAAIVGCGNDDAFKAFLERLCQTTVAFDPVLRRLSLTP EEEEECCCCCCHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGGLEISLSYADGLSIAGKPRPFTHDQPHPILTHDSAASQAAADGPFYS CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCC >Mature Secondary Structure APAYSVARGQTITAWAVSGLIASYFPGEPAPAEDRVNYRFINGFVDVGDLPCRKAFWST CCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECEEECCCCCHHHHHHHH MVGRELVPDKAWPSESLYLPGSNRRVEFTSFWHVPTHVRRWLKGTFRTEASRTLNLALKT HHHHHCCCCCCCCCCCEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCCCHHEEEEEEEC CGGVRIWVNGQEAVRFEPFRRNLESGTEIRLPLEAGDNEILVHTEDLAERDTTWFFELEM CCCEEEEECCCCCEEECHHHHCCCCCCEEEEEEECCCCEEEEEEHHHHCCCCEEEEEEEE LDEEPLCVLLPVSLDQDEVRELEALSRGVRPARDVFVNQPPEIIFDTAPERDLPVELKVV CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCEEEEEE GHGHERPVLAHAKLTLHAGQNRLTAVDVCAIADGYHGIRMTIGSGPGSVTRVIDAAFMSS ECCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHC ISPLPAEASLAARKRQALEYSARFGANRAGRLIAMMETGYDDQESFDRIVDATLASIDAR CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCH EDCSDFIMVPLLWLLGAHGDRMPKATVERIRQSVLSYRYWVDEPGNDAMWFWSENHVLCF HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCEEEE HTSQLLAGLLLPDEVFSASGRTGRQQAELAVERLGRWFDSVEAHGLAEWNSAAYYPIDFI EHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH GLMALERWAESGIADRARRQIDLIFRMIALHTLAGVPAGSQGRAYDKELRAGPLTELAPF HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHH AQVAFGTGWLNNGVAALTMFCAGDYEPPADLAELASLSRGRSVEARYSQGLESGKLVLFK HHHHHCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEE NEAAQLSTVVDHKTGRKGHQQHVLDIRLAGHPMARLWVNHPGEDDPWGNQRPSYWAGNGI CCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEECCCC LPRVAQHRDVALLIEDTGDARHAWTHAYIGRDGLDDLIVEDRWLIARSGRGFAALWASNG CHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCCEEEEEECCC LKLITDGPTAGREARSCGSLCGWAAIVGCGNDDAFKAFLERLCQTTVAFDPVLRRLSLTP EEEEECCCCCCHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGGLEISLSYADGLSIAGKPRPFTHDQPHPILTHDSAASQAAADGPFYS CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA