Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is zraS [C]
Identifier: 86360994
GI number: 86360994
Start: 282999
End: 284672
Strand: Reverse
Name: zraS [C]
Synonym: RHE_PF00264
Alternate gene names: 86360994
Gene position: 284672-282999 (Counterclockwise)
Preceding gene: 86360995
Following gene: 86360993
Centisome position: 44.31
GC content: 64.28
Gene sequence:
>1674_bases ATGAACCCCGTCAACATCCTCCTCGTCGACGACCAGCCCGCGAAGCTCCTGAGCTACGAAGTTATTCTCGAAGAGCTCGA GGAAAACCTGATCAAGGCGCAATCGGCGCGCGAAGCTTTCGAACATCTGCTGCGAAGCGAGATCGCCGTGATCCTCGTCG ACGTCTGCATGCCGGAACAGGACGGTTTCGAACTCGTCGGCATGATCCGGCAGCACCCGCGCTATCAGAACACGCCGATC ATTTTCGTCTCCGCCGTGATGCTGGCCGAACCCGACCGGCTGCGCGGCTATGCGGTCGGCGCCGTCGACTACGTCTCCGT CCCGATCGTGCCTGAGGTGTTGAGGGCCAAAGTCAGGGTTTTTGCCGATCTCTACAGGAAGACGCGAGAACTCGAACGTC TGAATGCCGAACTGGAGGCGAGGGTGCACCAGCGCACCGCCGAGCTCGAAGCGTCGGCGGCGCAGTTGCGCCAGCTGAAC GAGGAGCTCGAGCACCGCATCGACCAAAGGACGCGCGAGCGTGAGGAGGCGCTGGCGCAGCTCTTCGAGGCGCAGAAGCT CGATACGATCGGCCACCTGACAGGCGGCGTCGCGCACGATTTCAACAATCTTCTCATGGCGGTGCTCGGCAGCCTCAGTC TGCTAAAGAAGCGGCTTCCGGCGGATGAGCGAAGCGAACGCCTGGTGACGAACGCCATCCAGGCGGCCGAACGCGGGACG GCGCTCACCCAGCGCCTGCTTGCCTTCGCTCGCCGACAGGAGCTGAAGCCGCAGGCGGTCGACTTTCTCCGGCTGTTCGA AAACGTCGAGGATCTGCTCGCCAAGGCGGTCGGACCGCGGGTCGAGATCCGCAAGCGCATCCCAGCGGATCTGGAACCAC TGCTGGTGGACAGCAATCAGCTGGAACTGGCGCTCCTCAACCTCTTCGTCAATGCGCGGGATGCGCTCGAAAGCGGCGGT GCAGTGACCGTCGCGGCTGCGGCGGAAGAGGTTCGGCCGGCCGGTCTTGCAGGCGGGAATTACATCAGGATATCGGTCTC GGATGACGGCGAAGGGATGGACGAAGCGACGGTTCTGCGCGCCGCCGAGCCATTCTTCACCACGAAGGGAATCGGCAAGG GCACCGGGCTCGGCCTGTCGATGGTGCACGGCCTGGCAGCGCAATCGGGCGGTTCGATCCAGATTTCGAGCACGAGAGGT AAGGGCACGACCGTCTCCCTCTGGCTGCCGGTCGCGCAGAGCATTGCCAAGGCGCAGCCGGCGGTCGTGCCTGCGGACGT GGAACCCCTGAAATCGGTCTCGCGATCGCTTGCCATCCTCGTCGTCGACGACGATGCCCTCGTCAGGACTGGGACCGTGG CAATGCTGGAGGATCTCGGACACCTGCCGCGGGAGGCGGCTTCCGCTACTCAGGCCCTGGAATTCCTCGCCGGCGGGCAG AAGTGTGATCTCGTCATCACCGATCATGCCATGCCGGGCATGACCGGCGCCGAGCTCGCGCGCCACCTTCGTTCAGCCTT CCCCAACCTGCCCGTGATCCTCGCCTCAGGCTATGTCGAGCTTGCCGAGGATCAGGGGCTCGGCCGGATGCTCAGGATGG CGAAGCCGTTCACGCAAGAGCAGCTCCAAGCGGCCATGGACGAGGCGCTGAGGAACAAGGTCGCGGCAGCGTGA
Upstream 100 bases:
>100_bases TGCCTGGAGGCGGGTGCGTCGGATTACCTGGCGAAGCCCGTCAACACCGAGCAGCTCCTGTCGGCTCTGCGCATGTGGTT GCACCGCTGAGGATCCGGCC
Downstream 100 bases:
>100_bases TGGGGCTGGAAAGGGCGGCTGCGACAATGGCGCGATATTGGCGCGGGCAGGCCACATGGATCGGCTGGGATATCTTCGAA ATCTGACATCGCGGCGAGGG
Product: two-component sensor histidine kinase/response regulator hybrid protein
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRSEIAVILVDVCMPEQDGFELVGMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNAELEARVHQRTAELEASAAQLRQLN EELEHRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFLRLFENVEDLLAKAVGPRVEIRKRIPADLEPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAEEVRPAGLAGGNYIRISVSDDGEGMDEATVLRAAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRG KGTTVSLWLPVAQSIAKAQPAVVPADVEPLKSVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREAASATQALEFLAGGQ KCDLVITDHAMPGMTGAELARHLRSAFPNLPVILASGYVELAEDQGLGRMLRMAKPFTQEQLQAAMDEALRNKVAAA
Sequences:
>Translated_557_residues MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRSEIAVILVDVCMPEQDGFELVGMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNAELEARVHQRTAELEASAAQLRQLN EELEHRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFLRLFENVEDLLAKAVGPRVEIRKRIPADLEPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAEEVRPAGLAGGNYIRISVSDDGEGMDEATVLRAAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRG KGTTVSLWLPVAQSIAKAQPAVVPADVEPLKSVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREAASATQALEFLAGGQ KCDLVITDHAMPGMTGAELARHLRSAFPNLPVILASGYVELAEDQGLGRMLRMAKPFTQEQLQAAMDEALRNKVAAA >Mature_557_residues MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRSEIAVILVDVCMPEQDGFELVGMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNAELEARVHQRTAELEASAAQLRQLN EELEHRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFLRLFENVEDLLAKAVGPRVEIRKRIPADLEPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAEEVRPAGLAGGNYIRISVSDDGEGMDEATVLRAAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRG KGTTVSLWLPVAQSIAKAQPAVVPADVEPLKSVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREAASATQALEFLAGGQ KCDLVITDHAMPGMTGAELARHLRSAFPNLPVILASGYVELAEDQGLGRMLRMAKPFTQEQLQAAMDEALRNKVAAA
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=251, Percent_Identity=33.4661354581673, Blast_Score=125, Evalue=9e-30, Organism=Escherichia coli, GI1788549, Length=270, Percent_Identity=27.7777777777778, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI48994928, Length=368, Percent_Identity=28.5326086956522, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1788713, Length=369, Percent_Identity=26.2872628726287, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI87081816, Length=181, Percent_Identity=30.939226519337, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 60621; Mature: 60621
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRSEIAVILVDVCMPEQ CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGFELVGMIRQHPRYQNTPIIFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRV CCHHHHHHHHHCCCCCCCCEEEEEHHHHCCCHHHCCEEECCHHHEECCCHHHHHHHHHHH FADLYRKTRELERLNAELEARVHQRTAELEASAAQLRQLNEELEHRIDQRTREREEALAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ALTQRLLAFARRQELKPQAVDFLRLFENVEDLLAKAVGPRVEIRKRIPADLEPLLVDSNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEECCCC LELALLNLFVNARDALESGGAVTVAAAAEEVRPAGLAGGNYIRISVSDDGEGMDEATVLR HHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHH AAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRGKGTTVSLWLPVAQSIAKAQP HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCC AVVPADVEPLKSVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREAASATQALEFLAGGQ CCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC KCDLVITDHAMPGMTGAELARHLRSAFPNLPVILASGYVELAEDQGLGRMLRMAKPFTQE EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCHHHHHHHHCCCCHH QLQAAMDEALRNKVAAA HHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPVNILLVDDQPAKLLSYEVILEELEENLIKAQSAREAFEHLLRSEIAVILVDVCMPEQ CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGFELVGMIRQHPRYQNTPIIFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRV CCHHHHHHHHHCCCCCCCCEEEEEHHHHCCCHHHCCEEECCHHHEECCCHHHHHHHHHHH FADLYRKTRELERLNAELEARVHQRTAELEASAAQLRQLNEELEHRIDQRTREREEALAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLSLLKKRLPADERSERLVTNAIQAAERGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ALTQRLLAFARRQELKPQAVDFLRLFENVEDLLAKAVGPRVEIRKRIPADLEPLLVDSNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEECCCC LELALLNLFVNARDALESGGAVTVAAAAEEVRPAGLAGGNYIRISVSDDGEGMDEATVLR HHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHH AAEPFFTTKGIGKGTGLGLSMVHGLAAQSGGSIQISSTRGKGTTVSLWLPVAQSIAKAQP HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCC AVVPADVEPLKSVSRSLAILVVDDDALVRTGTVAMLEDLGHLPREAASATQALEFLAGGQ CCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC KCDLVITDHAMPGMTGAELARHLRSAFPNLPVILASGYVELAEDQGLGRMLRMAKPFTQE EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCHHHHHHHHCCCCHH QLQAAMDEALRNKVAAA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA