Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360878

Identifier: 86360878

GI number: 86360878

Start: 155656

End: 156447

Strand: Reverse

Name: 86360878

Synonym: RHE_PF00147

Alternate gene names: NA

Gene position: 156447-155656 (Counterclockwise)

Preceding gene: 86360880

Following gene: 86360875

Centisome position: 24.35

GC content: 58.96

Gene sequence:

>792_bases
ATGGTCATGCGACACGTTCTAGATGGCGCCGCCATCGTCGCGCGGCAAACTTTACTTATCAAAAGGCCGGTCGCGCTCCG
CCTGCCAACAAGGCAAGCCGAGGAACTCCTCGTCCTGCTGGAACACATTCAATCCGGGCATATATTGCACCTGCAGCGCC
TGGGTGGTGCGGTAATGGGACCCCCCTCGAAGGGAAGAGCGATGTGCAATGACTATCGGCTGATGGTGGATGTCTCCTCG
GTTGTCGAGGATTTCGCCGACATCAAGATCAAGATCCGCTTCGGCGAAGGCGCGCCGAACCTCGAAGCGCGCGAGGACAT
CAAGATTACCGATATAGGCCCGATAGTCAGACCGATCGACGGAACCCGTGACGAGGGAGAGCTCGTGCAGCGGCGCTGGA
GCTGGCCGGGACCGAACAAGCGGCCGGTCTATAATTTCCGCTCGGAAGGACGGGAGTTCACCTCCAATCGCTGTCTGATC
ATTTCCGATGGCTTTTATGAGTTCACCGATCCGAAGGACCCGAAAAAGAAGCGCAAGGACAAGTGGCTGTTCACCAAAAA
GGACGAGCCGATCTTCTGCATTGCCGGCATCTGGCGCGACACGCCGGACGTCGGTCAGGCCTTCACCATGCTGACGATGG
AACCGGGTCCAGACATCGCGCCCTACCACGATCGGCAGATTGTTATCCTGGAACGCGGCTCCTGGGCCGACTGGCTCGAT
CCATCGGTTTCTGCGAAGTCGCTGATCAGGCCGCTTTCCGCGGGCACCCTCGCTGTAGAACAGGTCGGGTAA

Upstream 100 bases:

>100_bases
TATCAGGAACGAGCACATTAGACAAGGCTGATGGATAATCCTGTTCGGTTCGCTGAACTGCTAAACTCCGTGCATGCGCG
CCGGTGAGACCGAACTTCAG

Downstream 100 bases:

>100_bases
TCCCGGCGCGGCAGCAATATTGCCTCGGTCCGTCTCGCAGCAAAACGGTTTGCTTGCCGTTTTCACAACGTCCCTAGAGA
GACCAAGTCCTAGCACCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MVMRHVLDGAAIVARQTLLIKRPVALRLPTRQAEELLVLLEHIQSGHILHLQRLGGAVMGPPSKGRAMCNDYRLMVDVSS
VVEDFADIKIKIRFGEGAPNLEAREDIKITDIGPIVRPIDGTRDEGELVQRRWSWPGPNKRPVYNFRSEGREFTSNRCLI
ISDGFYEFTDPKDPKKKRKDKWLFTKKDEPIFCIAGIWRDTPDVGQAFTMLTMEPGPDIAPYHDRQIVILERGSWADWLD
PSVSAKSLIRPLSAGTLAVEQVG

Sequences:

>Translated_263_residues
MVMRHVLDGAAIVARQTLLIKRPVALRLPTRQAEELLVLLEHIQSGHILHLQRLGGAVMGPPSKGRAMCNDYRLMVDVSS
VVEDFADIKIKIRFGEGAPNLEAREDIKITDIGPIVRPIDGTRDEGELVQRRWSWPGPNKRPVYNFRSEGREFTSNRCLI
ISDGFYEFTDPKDPKKKRKDKWLFTKKDEPIFCIAGIWRDTPDVGQAFTMLTMEPGPDIAPYHDRQIVILERGSWADWLD
PSVSAKSLIRPLSAGTLAVEQVG
>Mature_263_residues
MVMRHVLDGAAIVARQTLLIKRPVALRLPTRQAEELLVLLEHIQSGHILHLQRLGGAVMGPPSKGRAMCNDYRLMVDVSS
VVEDFADIKIKIRFGEGAPNLEAREDIKITDIGPIVRPIDGTRDEGELVQRRWSWPGPNKRPVYNFRSEGREFTSNRCLI
ISDGFYEFTDPKDPKKKRKDKWLFTKKDEPIFCIAGIWRDTPDVGQAFTMLTMEPGPDIAPYHDRQIVILERGSWADWLD
PSVSAKSLIRPLSAGTLAVEQVG

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29707; Mature: 29707

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMRHVLDGAAIVARQTLLIKRPVALRLPTRQAEELLVLLEHIQSGHILHLQRLGGAVMG
CCHHHHHCCHHHHHHHHHEEECCCEEECCCHHHHHHHHHHHHHCCCCEEEEHHHCCEEEC
PPSKGRAMCNDYRLMVDVSSVVEDFADIKIKIRFGEGAPNLEAREDIKITDIGPIVRPID
CCCCCCCCCCCEEEEEEHHHHHHHHHCEEEEEEECCCCCCCCCCCCEEEEECCCCEECCC
GTRDEGELVQRRWSWPGPNKRPVYNFRSEGREFTSNRCLIISDGFYEFTDPKDPKKKRKD
CCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCEECCCCCCHHHHHHC
KWLFTKKDEPIFCIAGIWRDTPDVGQAFTMLTMEPGPDIAPYHDRQIVILERGSWADWLD
CCEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
PSVSAKSLIRPLSAGTLAVEQVG
CCCCHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MVMRHVLDGAAIVARQTLLIKRPVALRLPTRQAEELLVLLEHIQSGHILHLQRLGGAVMG
CCHHHHHCCHHHHHHHHHEEECCCEEECCCHHHHHHHHHHHHHCCCCEEEEHHHCCEEEC
PPSKGRAMCNDYRLMVDVSSVVEDFADIKIKIRFGEGAPNLEAREDIKITDIGPIVRPID
CCCCCCCCCCCEEEEEEHHHHHHHHHCEEEEEEECCCCCCCCCCCCEEEEECCCCEECCC
GTRDEGELVQRRWSWPGPNKRPVYNFRSEGREFTSNRCLIISDGFYEFTDPKDPKKKRKD
CCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCEECCCCCCHHHHHHC
KWLFTKKDEPIFCIAGIWRDTPDVGQAFTMLTMEPGPDIAPYHDRQIVILERGSWADWLD
CCEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
PSVSAKSLIRPLSAGTLAVEQVG
CCCCHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA