Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360840

Identifier: 86360840

GI number: 86360840

Start: 115582

End: 117318

Strand: Reverse

Name: 86360840

Synonym: RHE_PF00107

Alternate gene names: NA

Gene position: 117318-115582 (Counterclockwise)

Preceding gene: 86360845

Following gene: 86360839

Centisome position: 18.26

GC content: 62.52

Gene sequence:

>1737_bases
GTGCGAACGGTCTTACCTGTTGCTAACATTGCGATACTCCCTGACTCCATGCTACACCAGAGCGCACCACTATGCACCAC
TTTTCATCACAAAGGACGCGGTTGTACAGGATCTGATAAGTCACCAAGCTGGCTGGTAGAAGGGCGAAAATCGCAGTTTC
GCTCCGTCGGCCCTGCTCTCCGCATTTTCCGACCTGGTGCGCATCGGCGTAAATGCTTTCCACTCTCTGCCACCGGAGGC
TGTCTGTTGCGTCCCGTCGAGATTGCGCCATCGCCGTATGCATTGCTGAGATCCTTACGGGGCCTCGGCTATTCACCCGA
AACCGCGCTCGCTGACCTGATCGACAATTCGCTCGCCGCTGGCGCGCGGCAGGTCCGCATTCACCTTGATTGGCGCGACG
GCAACCCGCTCGTTGAAATTCTCGATGACGGTACCGGAATGAACTTCGACCGGCTCGTTGAGGCAATGCGCTTTGGGGGT
GCCGGACCCAGCGCCGAACGGCAAGGGGGCGATCTCGGCCGATTCGGACTGGGATTGAAGACCGCCTCACTCTCGCAGTG
CCGCGAGCTGACCGTGGCGTCGCGCCGGGAAGGCTTAGTCGCGCGGCTGACCTGGGATGTCGATCGCGTTGGTGAAGGGT
GGTCCGCGGTCGAGCCTGATGCGTCGCCGTCGGGTGAGTTGGCGACCGAATTCCAGTCGTCAGGCAATGGCACGCTGGTG
AGTTGGAGCCGAATGGACCGGCTCGGTGGCCTCTGGGGCCTCGACCGCGATACCTTTAATGACCGAATCTCCGATATACG
CGCGCATCTCGCAATGACCTTTCACCGCTTTCTCAGCGGCGAGACACGGCGGCTTGCCATGAGCGTCAACGGCCGTGCAC
TCAACGCCTGGGATCCATTTTGCAGATGGCATGATGCGACCATGGCATTACCGCGTGACATCATTCGCGGTTCTGACGGC
GCAATCACGGCACGACCGTATATACTCCCTCATCGCGACCGGTTCGCGAATGAGCGCGAATGGGAAGATGCTGGTGGGCC
GGGCGGCTGGGTCGAACGGCAAGGATTTTACGTCTACCGGGGGGACCGCCTCGTGTCGGCCGGCGGCTGGCTCGGGCTTG
GTGGCGCTCGGGCCTGGACTCGCGAGGAATCGAGTCGACTCGCCCGCATCGCTCTCGAGCTACCCGCCTCGATGGACGAG
GCATGGCGGATCGATATCCGCAAATCTGTTGCTCGACCGCCAGCCTGGGCGCGGGGACGCTTGGCAGGTCTTGGCGCGGA
CTGCCGGCGACGCGCCCGCGAGGTCTTCGCTTGGCGCGGTGTCGGAGCGGGTCGCAAGGGCCGCCGCAGCAACACTGATG
GGGAAGCATGGCCATGGGAAGCGCGCAGCGCCAAAGCCGTTCCGCGATATCGTGTACGACGGGAACATCCTGCAGTTTCT
GCTGTGGCGCAGGCGCTCGGCGCCGAATCGGGACTGCTCGAAGGACTGCTCTCTGCCCTCGAGCTTACCGTTCCGGTCGA
GCGCATTTGGCTGGATGTCGCCGAGCAGGGGGGCGCAGAGCTTATGCAACCGGCAGCCACAGAAATTGCCGAACTCGCCA
CACCGCTTGCCACGCTGGTGCGCAGCATGGATAACATGGACAATACTGGAGACCGACTCGACTCGGTGCTGCGTTCCCTT
GGGATCACGCAGCCCGCATTGCGCGCCGCAGTCATCCGAATATTGGGGGAGAATTGA

Upstream 100 bases:

>100_bases
ATGGAGAACTGCCTGCCGAATCACCCAGGCAGCTGATACATCATTAGTAACGGCCAACGCCTGCACTTGGCGATACACGC
CTTCTGGCAATAATACTGTA

Downstream 100 bases:

>100_bases
GCGGATGGATCCGGTTACGCAGCTTGCGAATACTGCCCGCGTTGCACTCGGTCAACGAGCCGGCGATCGCACGCTGGGCA
CAGATGAGATCATGGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Mismatch Repair; Conserved Hypothethical Protein; Type II Restriction- System Methylation Subunit

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MRTVLPVANIAILPDSMLHQSAPLCTTFHHKGRGCTGSDKSPSWLVEGRKSQFRSVGPALRIFRPGAHRRKCFPLSATGG
CLLRPVEIAPSPYALLRSLRGLGYSPETALADLIDNSLAAGARQVRIHLDWRDGNPLVEILDDGTGMNFDRLVEAMRFGG
AGPSAERQGGDLGRFGLGLKTASLSQCRELTVASRREGLVARLTWDVDRVGEGWSAVEPDASPSGELATEFQSSGNGTLV
SWSRMDRLGGLWGLDRDTFNDRISDIRAHLAMTFHRFLSGETRRLAMSVNGRALNAWDPFCRWHDATMALPRDIIRGSDG
AITARPYILPHRDRFANEREWEDAGGPGGWVERQGFYVYRGDRLVSAGGWLGLGGARAWTREESSRLARIALELPASMDE
AWRIDIRKSVARPPAWARGRLAGLGADCRRRAREVFAWRGVGAGRKGRRSNTDGEAWPWEARSAKAVPRYRVRREHPAVS
AVAQALGAESGLLEGLLSALELTVPVERIWLDVAEQGGAELMQPAATEIAELATPLATLVRSMDNMDNTGDRLDSVLRSL
GITQPALRAAVIRILGEN

Sequences:

>Translated_578_residues
MRTVLPVANIAILPDSMLHQSAPLCTTFHHKGRGCTGSDKSPSWLVEGRKSQFRSVGPALRIFRPGAHRRKCFPLSATGG
CLLRPVEIAPSPYALLRSLRGLGYSPETALADLIDNSLAAGARQVRIHLDWRDGNPLVEILDDGTGMNFDRLVEAMRFGG
AGPSAERQGGDLGRFGLGLKTASLSQCRELTVASRREGLVARLTWDVDRVGEGWSAVEPDASPSGELATEFQSSGNGTLV
SWSRMDRLGGLWGLDRDTFNDRISDIRAHLAMTFHRFLSGETRRLAMSVNGRALNAWDPFCRWHDATMALPRDIIRGSDG
AITARPYILPHRDRFANEREWEDAGGPGGWVERQGFYVYRGDRLVSAGGWLGLGGARAWTREESSRLARIALELPASMDE
AWRIDIRKSVARPPAWARGRLAGLGADCRRRAREVFAWRGVGAGRKGRRSNTDGEAWPWEARSAKAVPRYRVRREHPAVS
AVAQALGAESGLLEGLLSALELTVPVERIWLDVAEQGGAELMQPAATEIAELATPLATLVRSMDNMDNTGDRLDSVLRSL
GITQPALRAAVIRILGEN
>Mature_578_residues
MRTVLPVANIAILPDSMLHQSAPLCTTFHHKGRGCTGSDKSPSWLVEGRKSQFRSVGPALRIFRPGAHRRKCFPLSATGG
CLLRPVEIAPSPYALLRSLRGLGYSPETALADLIDNSLAAGARQVRIHLDWRDGNPLVEILDDGTGMNFDRLVEAMRFGG
AGPSAERQGGDLGRFGLGLKTASLSQCRELTVASRREGLVARLTWDVDRVGEGWSAVEPDASPSGELATEFQSSGNGTLV
SWSRMDRLGGLWGLDRDTFNDRISDIRAHLAMTFHRFLSGETRRLAMSVNGRALNAWDPFCRWHDATMALPRDIIRGSDG
AITARPYILPHRDRFANEREWEDAGGPGGWVERQGFYVYRGDRLVSAGGWLGLGGARAWTREESSRLARIALELPASMDE
AWRIDIRKSVARPPAWARGRLAGLGADCRRRAREVFAWRGVGAGRKGRRSNTDGEAWPWEARSAKAVPRYRVRREHPAVS
AVAQALGAESGLLEGLLSALELTVPVERIWLDVAEQGGAELMQPAATEIAELATPLATLVRSMDNMDNTGDRLDSVLRSL
GITQPALRAAVIRILGEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63253; Mature: 63253

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVLPVANIAILPDSMLHQSAPLCTTFHHKGRGCTGSDKSPSWLVEGRKSQFRSVGPAL
CCCCCCCCCEEECCHHHHHCCCCCEEEHHCCCCCCCCCCCCCCHHCCCHHHHHHHCCCHH
RIFRPGAHRRKCFPLSATGGCLLRPVEIAPSPYALLRSLRGLGYSPETALADLIDNSLAA
EEECCCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GARQVRIHLDWRDGNPLVEILDDGTGMNFDRLVEAMRFGGAGPSAERQGGDLGRFGLGLK
CCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCC
TASLSQCRELTVASRREGLVARLTWDVDRVGEGWSAVEPDASPSGELATEFQSSGNGTLV
HHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEE
SWSRMDRLGGLWGLDRDTFNDRISDIRAHLAMTFHRFLSGETRRLAMSVNGRALNAWDPF
EHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCH
CRWHDATMALPRDIIRGSDGAITARPYILPHRDRFANEREWEDAGGPGGWVERQGFYVYR
HHHCCHHHHHHHHHHCCCCCCEEECCEECCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEE
GDRLVSAGGWLGLGGARAWTREESSRLARIALELPASMDEAWRIDIRKSVARPPAWARGR
CCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
LAGLGADCRRRAREVFAWRGVGAGRKGRRSNTDGEAWPWEARSAKAVPRYRVRREHPAVS
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHH
AVAQALGAESGLLEGLLSALELTVPVERIWLDVAEQGGAELMQPAATEIAELATPLATLV
HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RSMDNMDNTGDRLDSVLRSLGITQPALRAAVIRILGEN
HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTVLPVANIAILPDSMLHQSAPLCTTFHHKGRGCTGSDKSPSWLVEGRKSQFRSVGPAL
CCCCCCCCCEEECCHHHHHCCCCCEEEHHCCCCCCCCCCCCCCHHCCCHHHHHHHCCCHH
RIFRPGAHRRKCFPLSATGGCLLRPVEIAPSPYALLRSLRGLGYSPETALADLIDNSLAA
EEECCCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GARQVRIHLDWRDGNPLVEILDDGTGMNFDRLVEAMRFGGAGPSAERQGGDLGRFGLGLK
CCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCC
TASLSQCRELTVASRREGLVARLTWDVDRVGEGWSAVEPDASPSGELATEFQSSGNGTLV
HHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEE
SWSRMDRLGGLWGLDRDTFNDRISDIRAHLAMTFHRFLSGETRRLAMSVNGRALNAWDPF
EHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCH
CRWHDATMALPRDIIRGSDGAITARPYILPHRDRFANEREWEDAGGPGGWVERQGFYVYR
HHHCCHHHHHHHHHHCCCCCCEEECCEECCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEE
GDRLVSAGGWLGLGGARAWTREESSRLARIALELPASMDEAWRIDIRKSVARPPAWARGR
CCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCC
LAGLGADCRRRAREVFAWRGVGAGRKGRRSNTDGEAWPWEARSAKAVPRYRVRREHPAVS
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHH
AVAQALGAESGLLEGLLSALELTVPVERIWLDVAEQGGAELMQPAATEIAELATPLATLV
HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RSMDNMDNTGDRLDSVLRSLGITQPALRAAVIRILGEN
HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA