Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360817
Identifier: 86360817
GI number: 86360817
Start: 85696
End: 86193
Strand: Reverse
Name: 86360817
Synonym: RHE_PF00084
Alternate gene names: NA
Gene position: 86193-85696 (Counterclockwise)
Preceding gene: 86360818
Following gene: 86360816
Centisome position: 13.41
GC content: 58.43
Gene sequence:
>498_bases ATGATCTATTTTACCGGCGATACCCACTTTGCAGATCCCCGCGTCCTTCGCATCGACCGACGCCCCTTTCCCGACATGGC GTCCCACGACGTGACCCTGATCCGGAACTGGAACGAGATCGTTGATGCGCAGGACGACATCTGGCATCTCGGCGATTTCA TGTCGTTCCGCGGTGGCGACTGCGACCAGCTCCTTTCGATGCTGAACGGGCGGAAGCACCTCATCATCGGAAATAATGAT CCGTCAACGACGACCGAGGCGACAGGCTGGGCAAGCGTTCAGCACTACAGCGAGATGACGCTGGACGATCATCTGCTGAT CCTGTGCCATTACCCATTCCGCACCTGGAACAAGATGGGTAGGAAGTCGATCAATCTGCACGGACATTCCCATGGCCGCC TCAAGCCCCTGCCCCGCCAGTACGATGTCGGCGTCGATGCGCAGAGACTCAGGCCGGTGTCGCTGCAAACCCTGTTGTCA ACGAAGCCGGAGTCATGA
Upstream 100 bases:
>100_bases CAGCCCGTCCCTTGACGACGTGAAACATTCGATTCCCACGCCTGGCCATTAGCCAAACACGTCGGCTTCCCAAGCGGGCG GACTGCGCCATCTCTGTCAG
Downstream 100 bases:
>100_bases TGCCGCTGAAAAGCGCTAAGCGACAGAACGAAATGACGGCCTGGTTCTCTTCGCTGGCTCCGGTCCAGCCGATCGAGATG CTCGGCCTGTGGCGAGGTGC
Product: putative hydrolase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNEIVDAQDDIWHLGDFMSFRGGDCDQLLSMLNGRKHLIIGNND PSTTTEATGWASVQHYSEMTLDDHLLILCHYPFRTWNKMGRKSINLHGHSHGRLKPLPRQYDVGVDAQRLRPVSLQTLLS TKPES
Sequences:
>Translated_165_residues MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNEIVDAQDDIWHLGDFMSFRGGDCDQLLSMLNGRKHLIIGNND PSTTTEATGWASVQHYSEMTLDDHLLILCHYPFRTWNKMGRKSINLHGHSHGRLKPLPRQYDVGVDAQRLRPVSLQTLLS TKPES >Mature_165_residues MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNEIVDAQDDIWHLGDFMSFRGGDCDQLLSMLNGRKHLIIGNND PSTTTEATGWASVQHYSEMTLDDHLLILCHYPFRTWNKMGRKSINLHGHSHGRLKPLPRQYDVGVDAQRLRPVSLQTLLS TKPES
Specific function: Unknown
COG id: COG4186
COG function: function code R; Predicted phosphoesterase or phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 19008; Mature: 19008
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNEIVDAQDDIWHLGDFMSFRGGD CEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHCCCCCHHHHHHHHHCCCCC CDQLLSMLNGRKHLIIGNNDPSTTTEATGWASVQHYSEMTLDDHLLILCHYPFRTWNKMG HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHC RKSINLHGHSHGRLKPLPRQYDVGVDAQRLRPVSLQTLLSTKPES CEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNEIVDAQDDIWHLGDFMSFRGGD CEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHCCCCCHHHHHHHHHCCCCC CDQLLSMLNGRKHLIIGNNDPSTTTEATGWASVQHYSEMTLDDHLLILCHYPFRTWNKMG HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHC RKSINLHGHSHGRLKPLPRQYDVGVDAQRLRPVSLQTLLSTKPES CEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]