Click here to switch to the map view.

The map label for this gene is yciF [H]

Identifier: 86360785

GI number: 86360785

Start: 53885

End: 54388

Strand: Reverse

Name: yciF [H]

Synonym: RHE_PF00051

Alternate gene names: 86360785

Gene position: 54388-53885 (Counterclockwise)

Preceding gene: 86360788

Following gene: 86360776

Centisome position: 8.46

GC content: 59.52

Gene sequence:

>504_bases
ATGGCAACCGAGAAGACTCTGAACGACCTGTTTCTCGATACTCTCAAGGACATCTACTATGCCGAAAAGCAGATCCTGAA
GGCTCTGCCGAAGATGGCCCGCGCCGCGCAATTGGAAGAGGGCAAAGCCGGTTTTCTGCAGCATCGCGACGAGACTCAGG
CGCAGGTCGAACGCCTCGAACAGGTTTTCGAAATGATCGGCAAACCGGCACGCGGCAAGACCTGCGAGGCCATCCAGGGC
ATCATCGCCGAAGCCGAGGAGATCATGGACGAATTCAAGGGCACCGCTGCCCTCGATGCCGGCCTGATTTCGTCCGCCCA
GTCCGTCGAGCATTACGAAATCGCCCGCTACGGCACGTTGATCGCATGGGCAAAGCAGCTCGGCCTCAAGGATGCCGTGC
CGCTGCTGCAGGCTACGCTGGCGGAAGAAGAGGCAACCGACAAGAAGCTCACGCGGCTCGCCGAATCTTCAGCCAACATC
AAGGGTAAGGGCAAGGCGGCCTAG

Upstream 100 bases:

>100_bases
GAGTTGACGCCTCCGGCCAAAGGGGCGTCATATTTCCGATCGGGAACATCCGACCCATGCGAGAGTTGATTGTCGTCACG
ACACGCCACAGGAGGAATAA

Downstream 100 bases:

>100_bases
CCGCTCAATGCGCCATGATCCTTCGCAACGGCCGGCGCCCCGGCGGCCGTGCGTTTGCCAGGATTGCACCTGAGATCAAA
GACCAAGTTGCCAGATATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MATEKTLNDLFLDTLKDIYYAEKQILKALPKMARAAQLEEGKAGFLQHRDETQAQVERLEQVFEMIGKPARGKTCEAIQG
IIAEAEEIMDEFKGTAALDAGLISSAQSVEHYEIARYGTLIAWAKQLGLKDAVPLLQATLAEEEATDKKLTRLAESSANI
KGKGKAA

Sequences:

>Translated_167_residues
MATEKTLNDLFLDTLKDIYYAEKQILKALPKMARAAQLEEGKAGFLQHRDETQAQVERLEQVFEMIGKPARGKTCEAIQG
IIAEAEEIMDEFKGTAALDAGLISSAQSVEHYEIARYGTLIAWAKQLGLKDAVPLLQATLAEEEATDKKLTRLAESSANI
KGKGKAA
>Mature_166_residues
ATEKTLNDLFLDTLKDIYYAEKQILKALPKMARAAQLEEGKAGFLQHRDETQAQVERLEQVFEMIGKPARGKTCEAIQGI
IAEAEEIMDEFKGTAALDAGLISSAQSVEHYEIARYGTLIAWAKQLGLKDAVPLLQATLAEEEATDKKLTRLAESSANIK
GKGKAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=164, Percent_Identity=47.5609756097561, Blast_Score=136, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18295; Mature: 18164

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEKTLNDLFLDTLKDIYYAEKQILKALPKMARAAQLEEGKAGFLQHRDETQAQVERLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH
QVFEMIGKPARGKTCEAIQGIIAEAEEIMDEFKGTAALDAGLISSAQSVEHYEIARYGTL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAWAKQLGLKDAVPLLQATLAEEEATDKKLTRLAESSANIKGKGKAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ATEKTLNDLFLDTLKDIYYAEKQILKALPKMARAAQLEEGKAGFLQHRDETQAQVERLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH
QVFEMIGKPARGKTCEAIQGIIAEAEEIMDEFKGTAALDAGLISSAQSVEHYEIARYGTL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAWAKQLGLKDAVPLLQATLAEEEATDKKLTRLAESSANIKGKGKAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]