Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is yfcH [C]
Identifier: 85860004
GI number: 85860004
Start: 2222824
End: 2223162
Strand: Direct
Name: yfcH [C]
Synonym: SYN_00738
Alternate gene names: 85860004
Gene position: 2222824-2223162 (Clockwise)
Preceding gene: 85860003
Following gene: 85860006
Centisome position: 69.92
GC content: 56.64
Gene sequence:
>339_bases GTGATCAGGTGCACGATGGCGCCGTATCTCGAAGCTCAAGGGCATACGGTCATCAGACTGGTCCGGGATAAGTCGAAGTC CGGGGCTTTCTGGGATCCGCGGCACGGCGTCATTGAACTGCCTCCCGACGCAGACATCGGCGCCGTGATCAATCTGTCCG GTGAAAACTTCGCCGACGGGCGATGGCCAGCGGATAAGAAGGAAAGGATACGGCCCAGCCGTATTGAAGGAACCCTGCTT TCAGCCCGGACGGTTGCCGAACTAAACCCTCGTCCAAAGGCCTTCCTTTCATCTTCCGGAATCCCCCTTGACTCACAACA TCGTCCTTTCATATACTAA
Upstream 100 bases:
>100_bases CCACAGCAGAAAGACGTATGTCGCCATCACGATGACGCTGGATGGGTCAAAGCCAAAAAACACTGTAGTGACGTAATACA ACACTCCGAAGACGTTACTG
Downstream 100 bases:
>100_bases CTGCATGAAAAAATCTTATCTATCTGACGCTTCTCACGGTTTCCCTGCCCCCCCTCTTTCCGTCTCTACGAAACCGAACT GAGCAATAAAAAACCGGCCA
Product: cell division inhibitor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MIRCTMAPYLEAQGHTVIRLVRDKSKSGAFWDPRHGVIELPPDADIGAVINLSGENFADGRWPADKKERIRPSRIEGTLL SARTVAELNPRPKAFLSSSGIPLDSQHRPFIY
Sequences:
>Translated_112_residues MIRCTMAPYLEAQGHTVIRLVRDKSKSGAFWDPRHGVIELPPDADIGAVINLSGENFADGRWPADKKERIRPSRIEGTLL SARTVAELNPRPKAFLSSSGIPLDSQHRPFIY >Mature_112_residues MIRCTMAPYLEAQGHTVIRLVRDKSKSGAFWDPRHGVIELPPDADIGAVINLSGENFADGRWPADKKERIRPSRIEGTLL SARTVAELNPRPKAFLSSSGIPLDSQHRPFIY
Specific function: Unknown
COG id: COG1090
COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12479; Mature: 12479
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRCTMAPYLEAQGHTVIRLVRDKSKSGAFWDPRHGVIELPPDADIGAVINLSGENFADG CEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCC RWPADKKERIRPSRIEGTLLSARTVAELNPRPKAFLSSSGIPLDSQHRPFIY CCCCCCCCCCCCCCCCCEEECCEEHCCCCCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MIRCTMAPYLEAQGHTVIRLVRDKSKSGAFWDPRHGVIELPPDADIGAVINLSGENFADG CEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCC RWPADKKERIRPSRIEGTLLSARTVAELNPRPKAFLSSSGIPLDSQHRPFIY CCCCCCCCCCCCCCCCCEEECCEEHCCCCCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA