Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85859997
Identifier: 85859997
GI number: 85859997
Start: 2218125
End: 2218442
Strand: Direct
Name: 85859997
Synonym: SYN_03106
Alternate gene names: NA
Gene position: 2218125-2218442 (Clockwise)
Preceding gene: 85859996
Following gene: 85860003
Centisome position: 69.77
GC content: 51.57
Gene sequence:
>318_bases ATGGTCGGGTTCACAGTGGATGTGCCTTCACGCAACAAAAAGATGATGCGCGTTTTTCCGTATCGGCTATCCCATGACGA CTCATCTCGAGTCGGGAGTTTACGAACTCAAGATCGATTTCAGCCGGGGAAATATCTTAGGGATTCAATGACGCCGGCTT TCAAAACACCGGGTTTACAGAGAGGATTGCGGGCCCTCATGGGGACGGTTTTGTGTCGGAGTCTCAGGCCGTTGCGGATC GTTACTCGAGCACCGGCAGCTCACATTTCTTCCCGGATGGGGGTGTCTGGGATTGAAAATTTCTGGAAGAGATTCTGA
Upstream 100 bases:
>100_bases ATTTGCCGAGGCGGCCTTCACCACACATCATGACCGCCTGTAGCGGGGCATCGGCTCCTTCCTGCTTCAATATCTCATTC GCATCGCGAAAGAGAAAAAC
Downstream 100 bases:
>100_bases TCCCGGTTAACTGGTTTTCGGTTTTTGTCTTCAAACCGGCCGGCAAATATGGTTCCAAACAGGCACATGAACTCGGAATA TTTGAAAATACTCTGCTAAT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MVGFTVDVPSRNKKMMRVFPYRLSHDDSSRVGSLRTQDRFQPGKYLRDSMTPAFKTPGLQRGLRALMGTVLCRSLRPLRI VTRAPAAHISSRMGVSGIENFWKRF
Sequences:
>Translated_105_residues MVGFTVDVPSRNKKMMRVFPYRLSHDDSSRVGSLRTQDRFQPGKYLRDSMTPAFKTPGLQRGLRALMGTVLCRSLRPLRI VTRAPAAHISSRMGVSGIENFWKRF >Mature_105_residues MVGFTVDVPSRNKKMMRVFPYRLSHDDSSRVGSLRTQDRFQPGKYLRDSMTPAFKTPGLQRGLRALMGTVLCRSLRPLRI VTRAPAAHISSRMGVSGIENFWKRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11999; Mature: 11999
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGFTVDVPSRNKKMMRVFPYRLSHDDSSRVGSLRTQDRFQPGKYLRDSMTPAFKTPGLQ CCCEECCCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHH RGLRALMGTVLCRSLRPLRIVTRAPAAHISSRMGVSGIENFWKRF HHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MVGFTVDVPSRNKKMMRVFPYRLSHDDSSRVGSLRTQDRFQPGKYLRDSMTPAFKTPGLQ CCCEECCCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHH RGLRALMGTVLCRSLRPLRIVTRAPAAHISSRMGVSGIENFWKRF HHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA