Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85859977
Identifier: 85859977
GI number: 85859977
Start: 2201581
End: 2202006
Strand: Direct
Name: 85859977
Synonym: SYN_00714
Alternate gene names: NA
Gene position: 2201581-2202006 (Clockwise)
Preceding gene: 85859976
Following gene: 85859978
Centisome position: 69.25
GC content: 42.25
Gene sequence:
>426_bases GTGAAATGGAAATCAAAGCCTAACCCGGTGGAAACCATAAACGAAAAACCCTGGCTGAAAGACGATATTTCCCCTTACCA CCTCTACCTGAAATTCCTCTATGAATATTTCCGGAAGGGAACCGGAAAATATGATTTCATCTTCCTTGGCAAAGCTTACC GATTCCGAAACGAAGTTACCCGGGGATATGAAAAACTTCATCAAAACTGCCTGGGAAGAAGATGGTTTTCGTTTCGGCCA CGCCGCTCAACAACACCGTGGAAGATATCTGCAGTCATTTCAAGCTTTTTCAATTCCAAAGGAAGAGCGCCTTTCCCGAC ATCTCACTTGCAGTTCTATTATCCTTGCATGGATGTATGTTCATTGTGTAATTATACTATTAACACTATATGCATACCAT CCAATGCACATCAAGGAGTTCCATAG
Upstream 100 bases:
>100_bases GAAATTATTCCCGATACTGTAAGCGAGGAGATGCACCATGCGCCGGATCGTTTCGAAACGGAAATCGGCGACCGGAAGTT CATCGAATTCCTGCAGTCCG
Downstream 100 bases:
>100_bases TAATCTAAAATTTGACAAAAGCAGTGGCTGATCTTGTGAAAGGACAACACAGTGACAAGCACGAGAAAATTTATTCACAA AGCTTCATTGCGTGAAAAAG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVTRGYEKLHQNCLGRRWFSFRP RRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVCSLCNYTINTICIPSNAHQGVP
Sequences:
>Translated_141_residues MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVTRGYEKLHQNCLGRRWFSFRP RRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVCSLCNYTINTICIPSNAHQGVP >Mature_141_residues MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVTRGYEKLHQNCLGRRWFSFRP RRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVCSLCNYTINTICIPSNAHQGVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16781; Mature: 16781
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVT CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH RGYEKLHQNCLGRRWFSFRPRRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVC HHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH SLCNYTINTICIPSNAHQGVP HHHCCCHHEEEECCCCCCCCC >Mature Secondary Structure MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVT CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH RGYEKLHQNCLGRRWFSFRPRRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVC HHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH SLCNYTINTICIPSNAHQGVP HHHCCCHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA