Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859977

Identifier: 85859977

GI number: 85859977

Start: 2201581

End: 2202006

Strand: Direct

Name: 85859977

Synonym: SYN_00714

Alternate gene names: NA

Gene position: 2201581-2202006 (Clockwise)

Preceding gene: 85859976

Following gene: 85859978

Centisome position: 69.25

GC content: 42.25

Gene sequence:

>426_bases
GTGAAATGGAAATCAAAGCCTAACCCGGTGGAAACCATAAACGAAAAACCCTGGCTGAAAGACGATATTTCCCCTTACCA
CCTCTACCTGAAATTCCTCTATGAATATTTCCGGAAGGGAACCGGAAAATATGATTTCATCTTCCTTGGCAAAGCTTACC
GATTCCGAAACGAAGTTACCCGGGGATATGAAAAACTTCATCAAAACTGCCTGGGAAGAAGATGGTTTTCGTTTCGGCCA
CGCCGCTCAACAACACCGTGGAAGATATCTGCAGTCATTTCAAGCTTTTTCAATTCCAAAGGAAGAGCGCCTTTCCCGAC
ATCTCACTTGCAGTTCTATTATCCTTGCATGGATGTATGTTCATTGTGTAATTATACTATTAACACTATATGCATACCAT
CCAATGCACATCAAGGAGTTCCATAG

Upstream 100 bases:

>100_bases
GAAATTATTCCCGATACTGTAAGCGAGGAGATGCACCATGCGCCGGATCGTTTCGAAACGGAAATCGGCGACCGGAAGTT
CATCGAATTCCTGCAGTCCG

Downstream 100 bases:

>100_bases
TAATCTAAAATTTGACAAAAGCAGTGGCTGATCTTGTGAAAGGACAACACAGTGACAAGCACGAGAAAATTTATTCACAA
AGCTTCATTGCGTGAAAAAG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVTRGYEKLHQNCLGRRWFSFRP
RRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVCSLCNYTINTICIPSNAHQGVP

Sequences:

>Translated_141_residues
MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVTRGYEKLHQNCLGRRWFSFRP
RRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVCSLCNYTINTICIPSNAHQGVP
>Mature_141_residues
MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVTRGYEKLHQNCLGRRWFSFRP
RRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVCSLCNYTINTICIPSNAHQGVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16781; Mature: 16781

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
RGYEKLHQNCLGRRWFSFRPRRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVC
HHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
SLCNYTINTICIPSNAHQGVP
HHHCCCHHEEEECCCCCCCCC
>Mature Secondary Structure
MKWKSKPNPVETINEKPWLKDDISPYHLYLKFLYEYFRKGTGKYDFIFLGKAYRFRNEVT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
RGYEKLHQNCLGRRWFSFRPRRSTTPWKISAVISSFFNSKGRAPFPTSHLQFYYPCMDVC
HHHHHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
SLCNYTINTICIPSNAHQGVP
HHHCCCHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA