| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859295
Identifier: 85859295
GI number: 85859295
Start: 1479941
End: 1480699
Strand: Direct
Name: 85859295
Synonym: SYN_01573
Alternate gene names: NA
Gene position: 1479941-1480699 (Clockwise)
Preceding gene: 85859294
Following gene: 85859300
Centisome position: 46.55
GC content: 51.12
Gene sequence:
>759_bases GTGATCATCGATCTGAGAAGGAGAAAGGAGCGTCTTTTGAGCGAAGGTATGTTTCAGCCGGACCCTGTGGCGTCCCGGGA AACCTGGGAGCAGGAAATCAGCAATAGAATGGAGGACGGCGCCTTTTGCGCTGTTCTGGCGAGAGCGGGGATGGGAAAAA CGGCTTTTCTCGTCCAGATGGCTCTGAGCCAGATGCTTGGCCATGAAGACGTTCTTCATGTCAGTCTCCATGAGCCCATA GCCAAAGTGACCCTCTGGTATGAGGAACTCTTCGAAAAAAAATTCCGTCAGGAATCCCTGCAGAATTCGCGGAGAATCTG GGACAATCTTCTTCCTCACCGGTTCATTATGACCTTCCGGGTGGATCGCTTCAGCATACCCAGGCTGGAAGAACGTCTTA ACGATCTACTTGTTCAGGGCATCTTTCGTCCCCGGACACTGTTTCTTGACGGATGGCAGTCGAACAGCATCAACAGAACA GAACTGCACGAACTGAAAGCCTTTGCAAAAAGTCACAACCTGCGGGTCTGGCTTTCGGTTCATATTCACCGACCGGATTC TGAAGAGGGGGATTCTTACCCGGCTTTCCTGAAGAATTCTGACGACCTGTTCGAACTGATTATGCAGATGGAAGACAGCG GCCTGCAGATCCAGATGAACCCCATCAAGGACGTGACTGGAATCCTGCATACCTGGTCGATGAAGATGGATCCGGTTACG CTACTCGTTTCAGCCGAAAAAGTATCAGGCCTCTGTTAA
Upstream 100 bases:
>100_bases TTTCCGCATATCGGCAGGTGCCGCAGAGCATTGCGGAGAAGATTACGGAAGAAGTGGCTAAACGGAAAAAAAGCGCCGCG TAAAAATGAGGTGAACCCTC
Downstream 100 bases:
>100_bases ACCGGCTCTTTCAGTGATTCTCTGACCCGTTCCGCGATGCGGCGGACCTGCTGCATGCATTCTTCTTCGTTGAAAGTAAG AAGTTGCCGATCTTTCATCA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MIIDLRRRKERLLSEGMFQPDPVASRETWEQEISNRMEDGAFCAVLARAGMGKTAFLVQMALSQMLGHEDVLHVSLHEPI AKVTLWYEELFEKKFRQESLQNSRRIWDNLLPHRFIMTFRVDRFSIPRLEERLNDLLVQGIFRPRTLFLDGWQSNSINRT ELHELKAFAKSHNLRVWLSVHIHRPDSEEGDSYPAFLKNSDDLFELIMQMEDSGLQIQMNPIKDVTGILHTWSMKMDPVT LLVSAEKVSGLC
Sequences:
>Translated_252_residues MIIDLRRRKERLLSEGMFQPDPVASRETWEQEISNRMEDGAFCAVLARAGMGKTAFLVQMALSQMLGHEDVLHVSLHEPI AKVTLWYEELFEKKFRQESLQNSRRIWDNLLPHRFIMTFRVDRFSIPRLEERLNDLLVQGIFRPRTLFLDGWQSNSINRT ELHELKAFAKSHNLRVWLSVHIHRPDSEEGDSYPAFLKNSDDLFELIMQMEDSGLQIQMNPIKDVTGILHTWSMKMDPVT LLVSAEKVSGLC >Mature_252_residues MIIDLRRRKERLLSEGMFQPDPVASRETWEQEISNRMEDGAFCAVLARAGMGKTAFLVQMALSQMLGHEDVLHVSLHEPI AKVTLWYEELFEKKFRQESLQNSRRIWDNLLPHRFIMTFRVDRFSIPRLEERLNDLLVQGIFRPRTLFLDGWQSNSINRT ELHELKAFAKSHNLRVWLSVHIHRPDSEEGDSYPAFLKNSDDLFELIMQMEDSGLQIQMNPIKDVTGILHTWSMKMDPVT LLVSAEKVSGLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29407; Mature: 29407
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDLRRRKERLLSEGMFQPDPVASRETWEQEISNRMEDGAFCAVLARAGMGKTAFLVQM CEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH ALSQMLGHEDVLHVSLHEPIAKVTLWYEELFEKKFRQESLQNSRRIWDNLLPHRFIMTFR HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEE VDRFSIPRLEERLNDLLVQGIFRPRTLFLDGWQSNSINRTELHELKAFAKSHNLRVWLSV ECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEE HIHRPDSEEGDSYPAFLKNSDDLFELIMQMEDSGLQIQMNPIKDVTGILHTWSMKMDPVT EEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCEE LLVSAEKVSGLC EEEEHHHHCCCC >Mature Secondary Structure MIIDLRRRKERLLSEGMFQPDPVASRETWEQEISNRMEDGAFCAVLARAGMGKTAFLVQM CEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH ALSQMLGHEDVLHVSLHEPIAKVTLWYEELFEKKFRQESLQNSRRIWDNLLPHRFIMTFR HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEE VDRFSIPRLEERLNDLLVQGIFRPRTLFLDGWQSNSINRTELHELKAFAKSHNLRVWLSV ECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEE HIHRPDSEEGDSYPAFLKNSDDLFELIMQMEDSGLQIQMNPIKDVTGILHTWSMKMDPVT EEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCEE LLVSAEKVSGLC EEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA